Transcriptional profile of Taxus chinensis cells in response to methyl jasmonate

scientific article published on July 2, 2012

Transcriptional profile of Taxus chinensis cells in response to methyl jasmonate is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1046545625
P356DOI10.1186/1471-2164-13-295
P953full work available at URLhttps://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-13-295
https://europepmc.org/articles/PMC3414795
https://europepmc.org/articles/PMC3414795?pdf=render
https://link.springer.com/content/pdf/10.1186/1471-2164-13-295.pdf
P932PMC publication ID3414795
P698PubMed publication ID22748077
P5875ResearchGate publication ID228099785

P2093author name stringPeng Zhang
Meng Zhang
Chun-hua Fu
Long-jiang Yu
Yan-shan Dong
An-yuan Guo
Chun-fang Zhao
Shu-tao Li
P2860cites workThe First Insight into the Tissue Specific Taxus Transcriptome via Illumina Second Generation SequencingQ21560805
Mapping and quantifying mammalian transcriptomes by RNA-SeqQ22122035
The jasmonate signal pathwayQ24553336
De novo assembly of human genomes with massively parallel short read sequencingQ24655711
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT MethodQ25938999
Sequencing technologies - the next generationQ27860568
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics researchQ29547461
The significance of digital gene expression profilesQ29614357
WEGO: a web tool for plotting GO annotationsQ29616658
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotesQ29617994
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasetsQ29618029
Taxol biosynthetic genesQ31004828
Random sequencing of an induced Taxus cell cDNA library for identification of clones involved in Taxol biosynthesisQ31072227
The tify family previously known as ZIM.Q33344031
Phenylpropanoid biosynthesis and its regulationQ33538799
Taxol biosynthesis and molecular geneticsQ33630392
Plant antitumor agents. VI. The isolation and structure of taxol, a novel antileukemic and antitumor agent from Taxus brevifoliaQ34235776
Gene-to-metabolite networks for terpenoid indole alkaloid biosynthesis in Catharanthus roseus cellsQ34600470
Next-generation DNA sequencing techniquesQ34607452
The JAZ family of repressors is the missing link in jasmonate signalling.Q34652938
Next-generation sequencing transforms today's biologyQ34731728
High throughput sequencing technology reveals that the taxoid elicitor methyl jasmonate regulates microRNA expression in Chinese yew (Taxus chinensis).Q34977721
Transcription factors as tools for metabolic engineering in plantsQ35683408
Paclitaxel production by plant-cell-culture technology.Q35816810
Biochemistry of plant volatilesQ35869793
Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cellsQ36446259
Transcriptome Analysis of Taxus cuspidata Needles Based on 454 PyrosequencingQ38504922
Exploration of jasmonate signalling via automated and standardized transient expression assays in tobacco cellsQ38519330
The basic helix-loop-helix transcription factor CrMYC2 controls the jasmonate-responsive expression of the ORCA genes that regulate alkaloid biosynthesis in Catharanthus roseus.Q39576504
Transcriptomics: The digital generationQ39877314
Functional characterisation of genes involved in pyridine alkaloid biosynthesis in tobaccoQ40052051
ORCA3, a jasmonate-responsive transcriptional regulator of plant primary and secondary metabolismQ40868493
Conserved MYC transcription factors play a key role in jasmonate signaling both in tomato and ArabidopsisQ41023009
COI1 : An Arabidopsis Gene Required for Jasmonate-Regulated Defense and FertilityQ42677452
Clustered transcription factor genes regulate nicotine biosynthesis in tobacco.Q42853996
An approach to transcriptome analysis of non-model organisms using short-read sequencesQ45613856
Jasmonate signaling: toward an integrated viewQ46663061
Using 'mute' plants to translate volatile signalsQ46861042
JAZ repressor proteins are targets of the SCFCOI1 complex during jasmonate signallingQ58619723
APETALA2/ETHYLENE RESPONSE FACTOR and basic helix-loop-helix tobacco transcription factors cooperatively mediate jasmonate-elicited nicotine biosynthesisQ59166219
Methyl jasmonate-induced overproduction of paclitaxel and baccatin III in Taxus cell suspension culturesQ74663637
A novel R2R3 MYB transcription factor NtMYBJS1 is a methyl jasmonate-dependent regulator of phenylpropanoid-conjugate biosynthesis in tobaccoQ83204839
The phenylpropanoid pathway and plant defence-a genomics perspectiveQ84457691
P407language of work or nameEnglishQ1860
P921main subjectTaxus chinensisQ1056841
gene expression profilingQ1502169
RNA sequencingQ2542347
P304page(s)295
P577publication date2012-07-02
P1433published inBMC GenomicsQ15765854
P1476titleTranscriptional profile of Taxus chinensis cells in response to methyl jasmonate
P478volume13

Reverse relations

cites work (P2860)
Q47159608A Novel AP2/ERF Transcription Factor CR1 Regulates the Accumulation of Vindoline and Serpentine in Catharanthus roseus
Q46289692Comparative proteomic analyses of two Taxus species (Taxus × media and Taxus mairei) reveals variations in the metabolisms associated with paclitaxel and other metabolites
Q64099672Comparative transcriptome analyses revealed differential strategies of roots and leaves from methyl jasmonate treatment Baphicacanthus cusia (Nees) Bremek and differentially expressed genes involved in tryptophan biosynthesis
Q33617091Comparative transcriptome and potential antiviral signaling pathways analysis of the gills in the red swamp crayfish, Procambarus clarkii infected with White Spot Syndrome Virus (WSSV).
Q58601223Comparison of elicitor-based effects on metabolic responses of Taxus × media hairy roots in perfluorodecalin-supported two-phase culture system
Q39038619Correlation analysis of the taxane core functional group modification, enzyme expression, and metabolite accumulation profiles under methyl jasmonate treatment
Q34706881Deep Sequencing Reveals Transcriptome Re-Programming of Taxus × media Cells to the Elicitation with Methyl Jasmonate
Q35924363High-throughput sequencing reveals miRNA effects on the primary and secondary production properties in long-term subcultured Taxus cells
Q46292595Identification of potential genes that contributed to the variation in the taxoid contents between two Taxus species (Taxus media and Taxus mairei).
Q36990633In-depth comparative transcriptome analysis of intestines of red swamp crayfish, Procambarus clarkii, infected with WSSV.
Q42038718Jasmonate-responsive expression of paclitaxel biosynthesis genes in Taxus cuspidata cultured cells is negatively regulated by the bHLH transcription factors TcJAMYC1, TcJAMYC2, and TcJAMYC4.
Q51786210Mechanisms and effective control of physiological browning phenomena in plant cell cultures
Q34813339Methyl jasmonate represses growth and affects cell cycle progression in cultured Taxus cells
Q90569758New different origins and evolutionary processes of AP2/EREBP transcription factors in Taxus chinensis
Q64253434Regulation Mechanism of MYC Family Transcription Factors in Jasmonic Acid Signalling Pathway on Taxol Biosynthesis
Q38966402Selection and validation of reference genes for quantitative real-time PCR analysis of gene expression in Cichorium intybus.
Q38986976Synergistic effect of cyclodextrins and methyl jasmonate on taxane production in Taxus x media cell cultures.
Q89941782The R2R3-MYB transcription factor family in Taxus chinensis: identification, characterization, expression profiling and posttranscriptional regulation analysis
Q47937242Transcript profiling of jasmonate-elicited Taxus cells reveals a β-phenylalanine-CoA ligase.
Q28553526Transcriptional Responses and Gentiopicroside Biosynthesis in Methyl Jasmonate-Treated Gentiana macrophylla Seedlings
Q30784130Transcriptional data mining of Salvia miltiorrhiza in response to methyl jasmonate to examine the mechanism of bioactive compound biosynthesis and regulation
Q35607899Transcriptional profile of sweet orange in response to chitosan and salicylic acid
Q64239407Transcriptional profiling of methyl jasmonate-induced defense responses in bilberry (Vaccinium myrtillus L.)
Q41525180Transcriptome Assembly and Systematic Identification of Novel Cytochrome P450s in Taxus chinensis
Q64968259Transcriptome Sequencing Reveals Regulatory Mechanisms of Taxol Synthesis in Taxus wallichiana var. Mairei.
Q61445896Transcriptome analyses provide insights into the expression pattern and sequence similarity of several taxol biosynthesis-related genes in three Taxus species
Q52647375Transcriptome analysis of a taxol-producing endophytic fungus Cladosporium cladosporioides MD2.
Q57454750Transcriptome analysis of an incompatible Persea americana-Phytophthora cinnamomi interaction reveals the involvement of SA- and JA-pathways in a successful defense response
Q55093321Transcriptome-wide identification and screening of WRKY factors involved in the regulation of taxol biosynthesis in Taxus chinensis.
Q30926838Transcriptomic profiling of linolenic acid-responsive genes in ROS signaling from RNA-seq data in Arabidopsis.
Q40456430Two jasmonate-responsive factors, TcERF12 and TcERF15, respectively act as repressor and activator of tasy gene of taxol biosynthesis in Taxus chinensis.
Q98169958Two responses to MeJA induction of R2R3-MYB transcription factors regulate flavonoid accumulation in Glycyrrhiza uralensis Fisch

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