Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

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Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies is …
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scholarly articleQ13442814

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P356DOI10.1093/NAR/GKS808
P932PMC publication ID3592464
P698PubMed publication ID22933715
P5875ResearchGate publication ID230763506

P50authorChristian QuastQ97061969
Anna KlindworthQ112650872
Matthias HornQ38319169
Frank Oliver GlöcknerQ28913667
P2093author name stringJörg Peplies
Elmar Pruesse
Timmy Schweer
P2860cites workThe Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein familiesQ21089567
The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical PacificQ21092763
Genome sequencing in microfabricated high-density picolitre reactorsQ24544260
Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environmentQ24564814
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNAQ24569526
The oligonucleotide probe databaseQ24672264
Microbial diversity in the deep sea and the underexplored "rare biosphere"Q24685531
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARBQ24685829
Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom.Q51564000
Solexa Ltd.Q53639385
Specificity and sensitivity of eubacterial primers utilized for molecular profiling of bacteria within complex microbial ecosystemsQ80760475
Performance comparison of benchtop high-throughput sequencing platformsQ34241334
Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coliQ34691657
PrimerProspector: de novo design and taxonomic analysis of barcoded polymerase chain reaction primersQ34771394
DNA recovery from soils of diverse composition.Q35188380
Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencersQ36935436
Microbiology in the post-genomic era.Q37162151
probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007.Q40105290
Short pyrosequencing reads suffice for accurate microbial community analysisQ41868575
SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes.Q42160739
OligoCalc: an online oligonucleotide properties calculator.Q42431955
Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysisQ48081041
The impact of next-generation sequencing technology on geneticsQ28268088
Real-time DNA sequencing from single polymerase moleculesQ28301519
Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic SeaQ28744688
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARBQ29547254
ARB: a software environment for sequence dataQ29547354
Search and clustering orders of magnitude faster than BLASTQ29547431
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platformsQ29614454
An integrated semiconductor device enabling non-optical genome sequencingQ29617149
The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public dataQ31074822
The Genome Sequencer FLX System--longer reads, more applications, straight forward bioinformatics and more complete data setsQ31162188
Review and re-analysis of domain-specific 16S primersQ33194808
16 S rDNA primers and the unbiased assessment of thermophile diversityQ33200289
Bacterial diversity of a cyanobacterial mat degrading petroleum compounds at elevated salinities and temperaturesQ33251723
Comparative analysis of human gut microbiota by barcoded pyrosequencingQ33356063
A renaissance for the pioneering 16S rRNA geneQ33372030
Bacterial diversity and community structure in polygonal tundra soils from Samoylov Island, Lena Delta, Siberia.Q33374840
Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencingQ33385985
Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studiesQ33509522
Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic OceanQ33510545
Genomic and functional adaptation in surface ocean planktonic prokaryotesQ33737383
The taxonomic and functional diversity of microbes at a temperate coastal site: a 'multi-omic' study of seasonal and diel temporal variationQ33760622
The Earth Microbiome Project: Meeting report of the "1 EMP meeting on sample selection and acquisition" at Argonne National Laboratory October 6 2010.Q33815265
A new phylum of Archaea represented by a nanosized hyperthermophilic symbiontQ33958888
An all-taxon microbial inventory of the Moorea coral reef ecosystemQ34013531
Microbial community profiling for human microbiome projects: Tools, techniques, and challengesQ34017154
Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiomeQ34101963
Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studiesQ34109852
P275copyright licenseCreative Commons Attribution-NonCommercial 3.0 UnportedQ18810331
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesSQLQ47607
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)e1
P577publication date2012-08-28
P1433published inNucleic Acids ResearchQ135122
P1476titleEvaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
P478volume41

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cites work (P2860)
Q48302599"Pomacytosis"-Semi-extracellular phagocytosis of cyanobacteria by the smallest marine algae.
Q3865882816S rDNA analysis of periodontal plaque in chronic obstructive pulmonary disease and periodontitis patients
Q3765665516S rDNA pyrosequencing analysis of bacterial community in heavy metals polluted soils
Q9250769516S rRNA Gene Amplicon Sequence Data from Chicken Cecal Feces from Vietnam and Thailand
Q9005050516S rRNA Gene Sequencing Reveals a Shift in the Microbiota of Diaphorina citri During the Psyllid Life Cycle
Q5114679216S rRNA Gene-Based Metagenomic Analysis of Ozark Cave Bacteria.
Q9267025516S rRNA metagenomic analysis of the bacterial community associated with turf grass seeds from low moisture and high moisture climates
Q462575165-Fluorouracil and irinotecan (SN-38) have limited impact on colon microbial functionality and composition in vitro.
Q60921762A Bronze-Tomato Enriched Diet Affects the Intestinal Microbiome under Homeostatic and Inflammatory Conditions
Q58785638A Comparison of Methods for the Extraction of Plasmids Capable of Conferring Antibiotic Resistance in a Human Pathogen From Complex Broiler Cecal Samples
Q40527883A House for Two--Double Bacterial Infection in Euplotes woodruffi Sq1 (Ciliophora, Euplotia) Sampled in Southeastern Brazil.
Q64102623A Mediterranean Diet Mix Has Chemopreventive Effects in a Murine Model of Colorectal Cancer Modulating Apoptosis and the Gut Microbiota
Q40102996A Method to Assess Bacteriocin Effects on the Gut Microbiota of Mice
Q55022552A Mosaic of Geothermal and Marine Features Shapes Microbial Community Structure on Deception Island Volcano, Antarctica.
Q53070115A Retrospective Review of Microbiological Methods Applied in Studies Following the Deepwater Horizon Oil Spill.
Q36092593A Single-Batch Fermentation System to Simulate Human Colonic Microbiota for High-Throughput Evaluation of Prebiotics
Q52690219A Walnut-Enriched Diet Affects Gut Microbiome in Healthy Caucasian Subjects: A Randomized, Controlled Trial.
Q90085407A brief period of sleep deprivation leads to subtle changes in mouse gut microbiota
Q57036587A combined lipidomic and 16S rRNA gene amplicon sequencing approach reveals archaeal sources of intact polar lipids in the stratified Black Sea water column
Q92887279A commercial seaweed extract structured microbial communities associated with tomato and pepper roots and significantly increased crop yield
Q28681345A comparative study of microbial diversity and community structure in marine sediments using poly(A) tailing and reverse transcription-PCR
Q35938718A comparison of the gut microbiome between long-term users and non-users of proton pump inhibitors.
Q57799940A comprehensive analysis of the faecal microbiome and metabolome of Strongyloides stercoralis infected volunteers from a non-endemic area
Q35893418A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling
Q59336399A comprehensive fungi-specific 18S rRNA gene sequence primer toolkit suited for diverse research issues and sequencing platforms
Q37719517A distinct bacterial dysbiosis associated skin inflammation in ovine footrot
Q90310253A framework for assessing 16S rRNA marker-gene survey data analysis methods using mixtures
Q49843935A microbiome case-control study of recurrent acute otitis media identified potentially protective bacterial genera.
Q101403122A multi-disciplinary comparison of great ape gut microbiota in a central African forest and European zoo
Q92977542A multidisciplinary approach to mental illness: do inflammation, telomere length and microbiota form a loop? A protocol for a cross-sectional study on the complex relationship between inflammation, telomere length, gut microbiota and psychiatric dis
Q26771658A new perspective on microbial landscapes within food production
Q28005548A new view of the tree of life
Q35836839A novel conceptual approach to read-filtering in high-throughput amplicon sequencing studies
Q33916299A portable system for rapid bacterial composition analysis using a nanopore-based sequencer and laptop computer.
Q60959724A practical introduction to microbial molecular ecology through the use of isolation chips
Q90604953A rapid shift to high-grain diet results in dynamic changes in rumen epimural microbiome in sheep
Q89945125A snapshot of microbial diversity and function in an undisturbed sugarcane bagasse pile
Q92527278A specific synbiotic-containing amino acid-based formula restores gut microbiota in non-IgE mediated cow's milk allergic infants: a randomized controlled trial
Q57085129A submarine volcanic eruption leads to a novel microbial habitat
Q90090317A synbiotic concept containing spore-forming Bacillus strains and a prebiotic fiber blend consistently enhanced metabolic activity by modulation of the gut microbiome in vitro
Q63352013A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems
Q93128609ANCHOR: a 16S rRNA gene amplicon pipeline for microbial analysis of multiple environmental samples
Q92927768APOE genotype influences the gut microbiome structure and function in humans and mice: relevance for Alzheimer's disease pathophysiology
Q35875899Absence of Bacteria on Coronary Angioplasty Balloons from Unselected Patients: Results with Use of a High Sensitivity Polymerase Chain Reaction Assay
Q41122393Abundance and Relative Distribution of Frankia Host Infection Groups Under Actinorhizal Alnus glutinosa and Non-actinorhizal Betula nigra Trees
Q35973106Abundant Trimethylornithine Lipids and Specific Gene Sequences Are Indicative of Planctomycete Importance at the Oxic/Anoxic Interface in Sphagnum-Dominated Northern Wetlands
Q41101297Acidotolerant Bacteria and Fungi as a Sink of Methanol-Derived Carbon in a Deciduous Forest Soil
Q28829566Active and Secretory IgA-Coated Bacterial Fractions Elucidate Dysbiosis in Clostridium difficile Infection
Q42369116Adaptation of Methanogenic Inocula to Anaerobic Digestion of Maize Silage
Q77790155Adapterama II: universal amplicon sequencing on illumina platforms (TaggiMatrix)
Q90368982Adding value to home compost: Biopesticide properties through Bacillus thuringiensis inoculation
Q38656353Advances and challenges in barcoding pathogenic and environmental Leptospira.
Q37378871Aerobic De-Epoxydation of Trichothecene Mycotoxins by a Soil Bacterial Consortium Isolated Using In Situ Soil Enrichment
Q35854302Aflatoxin B1 Induced Compositional Changes in Gut Microbial Communities of Male F344 Rats
Q90397577Agroforestry Management Systems Drive the Composition, Diversity, and Function of Fungal and Bacterial Endophyte Communities in Theobroma Cacao Leaves
Q90157946Air-side ammonia stripping coupled to anaerobic digestion indirectly impacts anaerobic microbiome
Q64235782Airborne Microbial Communities at High-Altitude and Suburban Sites in Toyama, Japan Suggest a New Perspective for Bioprospecting
Q98177691Alterations in Circulating Fatty Acid Are Associated With Gut Microbiota Dysbiosis and Inflammation in Multiple Sclerosis
Q90438079Alterations in gut bacterial and fungal microbiomes are associated with bacterial Keratitis, an inflammatory disease of the human eye
Q38781785Alterations in the Rumen Liquid-, Particle- and Epithelium-Associated Microbiota of Dairy Cows during the Transition from a Silage- and Concentrate-Based Ration to Pasture in Spring.
Q55439502Alterations in the gut bacterial microbiome in fungal Keratitis patients.
Q59798770Ammonia Inhibition of Anaerobic Volatile Fatty Acid Degrading Microbial Communities
Q51190878An Exploration into the Bacterial Community under Different Pasteurization Conditions during Substrate Preparation (Composting-Phase II) for Agaricus bisporus Cultivation.
Q35799703An accurate and efficient experimental approach for characterization of the complex oral microbiota
Q41191200An efficient strategy using k-mers to analyse 16S rRNA sequences.
Q46317352An exceptional family: Ophiocordyceps-allied fungus dominates the microbiome of soft scale insects (Hemiptera: Sternorrhyncha: Coccidae).
Q91833729An exploration of smokeless tobacco product nucleic acids: a combined metagenome and metatranscriptome analysis
Q91672495An exploration of the gut and environmental resistome in a community in northern Vietnam in relation to antibiotic use
Q35795213An extended single-index multiplexed 16S rRNA sequencing for microbial community analysis on MiSeq illumina platforms.
Q111630384An improved metagenomic strategy reveals an unprecedentedly high level of intragenomic polymorphism of ribosomal DNA in three species of Camellia
Q48906503An improved protocol with a highly degenerate primer targeting copper-containing membrane-bound monooxygenase genes for community analysis of methane- and ammonia-oxidizing bacteria.
Q90160148An optimised saliva collection method to produce high-yield, high-quality RNA for translational research
Q39546221Anaerobic Methane Oxidation Driven by Microbial Reduction of Natural Organic Matter in a Tropical Wetland
Q61450241Anaerobic Process for Bioenergy Recovery From Dairy Waste: Meta-Analysis and Enumeration of Microbial Community Related to Intermediates Production
Q28830259Anaerobic microbial community response to methanogenic inhibitors 2-bromoethanesulfonate and propynoic acid
Q26795701Analyses of Intestinal Microbiota: Culture versus Sequencing
Q41474970Analysing Microbial Community Composition through Amplicon Sequencing: From Sampling to Hypothesis Testing
Q59138374Analysis of Gut Microbiota in Rheumatoid Arthritis Patients: Disease-Related Dysbiosis and Modifications Induced by Etanercept
Q56888318Analysis of sequencing strategies and tools for taxonomic annotation: Defining standards for progressive metagenomics
Q89633503Analysis of the Bacterial Diversity of Paipa Cheese (a Traditional Raw Cow's Milk Cheese from Colombia) by High-Throughput Sequencing
Q90469000Analysis of the Microbiome of Rainbow Trout (Oncorhynchus mykiss) Exposed to the Pathogen Flavobacterium psychrophilum 10094
Q92699963Analysis of the Rumen Microbiota of Beef Calves Supplemented During the Suckling Phase
Q90580710Analysis of the colonic mucosa associated microbiota (MAM) using brushing samples during colonic endoscopic procedures
Q36087601Analysis of the duodenal microbiotas of weaned piglet fed with epidermal growth factor-expressed Saccharomyces cerevisiae
Q36076542Analysis of the mouse gut microbiome using full-length 16S rRNA amplicon sequencing
Q92043413Annual replication is essential in evaluating the response of the soil microbiome to the genetic modification of maize in different biogeographical regions
Q41158550Anti-obesity and anti-inflammatory effects of synthetic acetic acid vinegar and Nipa vinegar on high-fat-diet-induced obese mice
Q45325462Antibiotic treatment disrupts bacterial communities in the colon and rectum of simian immunodeficiency virus-infected macaques
Q57114440Antibiotic-induced microbiome depletion alters metabolic homeostasis by affecting gut signaling and colonic metabolism
Q90259128Antibiotics as chemical warfare across multiple taxonomic domains and trophic levels in brown food webs
Q64091150Antimicrobial removal on piglets promotes health and higher bacterial diversity in the nasal microbiota
Q35847848Application of urea-agarose gel electrophoresis to select non-redundant 16S rRNAs for taxonomic studies: palladium(II) removal bacteria.
Q93050425Applications of sequencing technology in clinical microbial infection
Q34775693Archaea on human skin.
Q64054806Archaeal Sources of Intact Membrane Lipid Biomarkers in the Oxygen Deficient Zone of the Eastern Tropical South Pacific
Q35496928Archaeal community structure in leachate and solid waste is correlated to methane generation and volume reduction during biodegradation of municipal solid waste.
Q35611947Archaeal microbiota population in piglet feces shifts in response to weaning: Methanobrevibacter smithii is replaced with Methanobrevibacter boviskoreani
Q36973186Artificial Seawater Media Facilitate Cultivating Members of the Microbial Majority from the Gulf of Mexico.
Q90681426Asaia Activates Immune Genes in Mosquito Eliciting an Anti-Plasmodium Response: Implications in Malaria Control
Q46312998Assessing SSU rDNA Barcodes in Foraminifera: A Case Study using Bolivina quadrata
Q100696661Assessing and modeling biocatalysis in field denitrification beds reveals key influencing factors for future constructions
Q50422100Assessing bacterial community dynamics across the gastrointestinal tract of dairy calves during pre-weaning development.
Q44877165Assessing species biomass contributions in microbial communities via metaproteomics
Q28817065Assessing the composition of microbial communities in textile wastewater treatment plants in comparison with municipal wastewater treatment plants
Q59800444Assessment of Microbial Community Dynamics in River Bank Filtrate Using High-Throughput Sequencing and Flow Cytometry
Q46328963Assessment of bacteria and archaea in metalworking fluids using massive parallel 16S rRNA gene tag sequencing
Q37601869Assessment of the Fecal Microbiota in Beef Calves
Q57157694Assessment of the bacterial community structure in shallow and deep sediments of the Perdido Fold Belt region in the Gulf of Mexico
Q91837173Association between the cervicovaginal microbiome, BRCA1 mutation status, and risk of ovarian cancer: a case-control study
Q35657238Association of targeted multiplex PCR with resequencing microarray for the detection of multiple respiratory pathogens
Q93006506Associations of Breast Milk Microbiota, Immune Factors, and Fatty Acids in the Rat Mother-Offspring Pair
Q37504860Associative nitrogen fixation in nodules of the conifer Lepidothamnus fonkii (Podocarpaceae) inhabiting ombrotrophic bogs in southern Patagonia
Q47126247Attenuation of CD4+CD25+ Regulatory T Cells in the Tumor Microenvironment by Metformin, a Type 2 Diabetes Drug
Q28816963Bacillus thuringiensis and Bacillus weihenstephanensis Inhibit the Growth of Phytopathogenic Verticillium Species
Q35693671Back to Basics--The Influence of DNA Extraction and Primer Choice on Phylogenetic Analysis of Activated Sludge Communities.
Q61448861Bacteria Associated With a Commercial Mycorrhizal Inoculum: Community Composition and Multifunctional Activity as Assessed by Illumina Sequencing and Culture-Dependent Tools
Q38368355Bacteria Associated to Plants Naturally Selected in a Historical PCB Polluted Soil Show Potential to Sustain Natural Attenuation
Q56927587Bacteria and Competing Herbivores Weaken Top-Down and Bottom-Up Aphid Suppression
Q38802443Bacteria as Emerging Indicators of Soil Condition
Q41224674Bacterial Abilities and Adaptation Toward the Rhizosphere Colonization
Q58596223Bacterial Abundance and Community Composition in Pond Water From Shrimp Aquaculture Systems With Different Stocking Densities
Q99237698Bacterial Alterations in Post-Cholecystectomy Patients Are Associated With Colorectal Cancer
Q57817960Bacterial Associates of a Gregarious Riparian Beetle With Explosive Defensive Chemistry
Q56926250Bacterial Biofilm Communities and Coral Larvae Settlement at Different Levels of Anthropogenic Impact in the Spermonde Archipelago, Indonesia
Q97568191Bacterial Community Structure Dynamics in Meloidogyne incognita-Infected Roots and Its Role in Worm-Microbiome Interactions
Q41534259Bacterial Community Structure in the Asian Rice Gall Midge Reveals a Varied Microbiome Rich in Proteobacteria
Q59804878Bacterial Diversity Associated With the Rhizosphere and Endosphere of Two Halophytes: Glaux maritima and Salicornia europaea
Q47105180Bacterial Diversity and Biogeochemistry of Two Marine Shallow-Water Hydrothermal Systems off Dominica (Lesser Antilles).
Q58596193Bacterial Diversity and the Geochemical Landscape in the Southwestern Gulf of Mexico
Q93014159Bacterial Exposure Mediates Developmental Plasticity and Resistance to Lethal Vibrio lentus Infection in Purple Sea Urchin (Strongylocentrotus purpuratus) Larvae
Q28547252Bacterial Landscape of Bloodstream Infections in Neutropenic Patients via High Throughput Sequencing
Q55285524Bacterial Preferences for Specific Soil Particle Size Fractions Revealed by Community Analyses.
Q90408697Bacterial analysis in the early developmental stages of the black tiger shrimp (Penaeus monodon)
Q90051219Bacterial and Eukaryotic Small-Subunit Amplicon Data Do Not Provide a Quantitative Picture of Microbial Communities, but They Are Reliable in the Context of Ecological Interpretations
Q97644505Bacterial and Fungal Dynamics During the Fermentation Process of Sesotho, a Traditional Beer of Southern Africa
Q91788051Bacterial biofilm development during experimental degradation of Melicertus kerathurus exoskeleton in seawater
Q46331170Bacterial communities in the small intestine respond differently to those in the caecum and colon in mice fed low- and high-fat diets
Q36273634Bacterial community diversity associated with different levels of dietary nutrition in the rumen of sheep
Q89655879Bacterial community dynamics in spontaneous sourdoughs made from wheat, spelt, and rye wholemeal flour
Q36004537Bacterial community in Haemaphysalis ticks of domesticated animals from the Orang Asli communities in Malaysia.
Q92180419Bacterial community structure in rotating biological contactor treating coke wastewater in relation to medium composition
Q34445722Bacterial diversity dynamics associated with different diets and different primer pairs in the rumen of Kankrej cattle
Q90437788Bacterial diversity in Icelandic cold spring sources and in relation to the groundwater amphipod Crangonyx islandicus
Q91950652Bacterial fecal microbiota is only minimally affected by a standardized weight loss plan in obese cats
Q89771120Bacterial metagenome analysis of Mytilus galloprovincialis collected from Istanbul and Izmir coastal stations of Turkey
Q89303232Bacterial microbiome of root-associated endophytes of Salicornia europaea in correspondence to different levels of salinity
Q60046285Bacterial microbiome of the chigger mite Leptotrombidium imphalum varies by life stage and infection with the scrub typhus pathogen Orientia tsutsugamushi
Q43027151Bacterial populations on brewery filling hall surfaces as revealed by next-generation sequencing
Q31154846Bacterial profile of dentine caries and the impact of pH on bacterial population diversity
Q64114094Bacterial release from pipe biofilm in a full-scale drinking water distribution system
Q93023322Bacterial succession along a sediment porewater gradient at Lake Neusiedl in Austria
Q58569514Bacterial virulence against an oceanic bloom-forming phytoplankter is mediated by algal DMSP
Q90317738Bacterioplankton reveal years-long retention of Atlantic deep-ocean water by the Tropic Seamount
Q54965980Benchmarking taxonomic assignments based on 16S rRNA gene profiling of the microbiota from commonly sampled environments.
Q90134725Benchmarking urine storage and collection conditions for evaluating the female urinary microbiome
Q51148682Benthic Bacterial Community Composition in the Oligohaline-Marine Transition of Surface Sediments in the Baltic Sea Based on rRNA Analysis.
Q35101925Better primer design for metagenomics applications by increasing taxonomic distinguishability
Q97681158Bile acids drive the newborn's gut microbiota maturation
Q98187118Bio-electrochemical COD removal for energy-efficient, maximum and robust nitrogen recovery from urine through membrane aerated nitrification
Q35679269BioMaS: a modular pipeline for Bioinformatic analysis of Metagenomic AmpliconS.
Q36827102Bioaugmentation Mitigates the Impact of Estrogen on Coliform-Grazing Protozoa in Slow Sand Filters
Q91513284Biochar enhanced the nitrifying and denitrifying bacterial communities during the composting of poultry manure and rice straw
Q46315297Biochemical Mechanisms and Microorganisms Involved in Anaerobic Testosterone Metabolism in Estuarine Sediments.
Q55515867Biochemical methane potential of microalgae biomass using different microbial inocula.
Q64120827Biodegradation of thiocyanate by a native groundwater microbial consortium
Q35887300Biodiversity patterns of plankton assemblages at the extremes of the Red Sea.
Q47730458Biofilms in shower hoses.
Q46311840Biogeochemical gradients and microbial communities in Winogradsky columns established with polluted wetland sediments.
Q28543950Biogeochemical typing of paddy field by a data-driven approach revealing sub-systems within a complex environment--a pipeline to filtrate, organize and frame massive dataset from multi-omics analyses
Q28075867Bioinformatics strategies for taxonomy independent binning and visualization of sequences in shotgun metagenomics
Q33803996Bioinspired nanocoatings for biofouling prevention by photocatalytic redox reactions
Q59153553Biological crusts of serpentine and non-serpentine soils from the Barberton Greenstone Belt of South Africa
Q35477523Bioremediation of contaminated marine sediments can enhance metal mobility due to changes of bacterial diversity.
Q36046088Bipartite Graphs for Visualization Analysis of Microbiome Data.
Q89558988Black soldier fly and gut health in broiler chickens: insights into the relationship between cecal microbiota and intestinal mucin composition
Q57816747Bleaching-Associated Changes in the Microbiome of Large Benthic Foraminifera of the Great Barrier Reef, Australia
Q41109834Bottom-up effects on herbivore-induced plant defences: a case study based on compositional patterns of rhizosphere microbial communities
Q36925210Bovine Teat Microbiome Analysis Revealed Reduced Alpha Diversity and Significant Changes in Taxonomic Profiles in Quarters with a History of Mastitis
Q61800086Breast Milk Microbiota Is Shaped by Mode of Delivery and Intrapartum Antibiotic Exposure
Q47113942Breast tissue, oral and urinary microbiomes in breast cancer.
Q97521321Breast-Milk Microbiota Linked to Celiac Disease Development in Children: A Pilot Study From the PreventCD Cohort
Q93206081Breastfeeding: a key modulator of gut microbiota characteristics in late infancy
Q47579606Bridging spatially segregated redox zones with a microbial electrochemical snorkel triggers biogeochemical cycles in oil-contaminated River Tyne (UK) sediments.
Q89965357Broad and Fine Scale Variability in Bacterial Diversity and Cyanotoxin Quotas in Benthic Cyanobacterial Mats
Q92802544CFTR dysregulation drives active selection of the gut microbiome
Q61104211CO 2 and carbonate as substrate for the activation of the microbial community in 180 m deep bedrock fracture fluid of Outokumpu Deep Drill Hole, Finland
Q92990776Cabbage looper (Trichoplusia ni Hübner) labial glands contain unique bacterial flora in contrast with their alimentary canal, mandibular glands, and Malpighian tubules
Q55250220Canola Root–Associated Microbiomes in the Canadian Prairies.
Q46264098Carbonate-rich dendrolitic cones: insights into a modern analog for incipient microbialite formation, Little Hot Creek, Long Valley Caldera, California
Q37157802Cardiorespiratory fitness as a predictor of intestinal microbial diversity and distinct metagenomic functions
Q98289730Changes and roles of intestinal fungal microbiota in coronary heart disease complicated with nonalcoholic fatty liver disease
Q92537881Changes in Microbiota Across Developmental Stages of Aedes koreicus, an Invasive Mosquito Vector in Europe: Indications for Microbiota-Based Control Strategies
Q37402625Changes in duodenal tissue-associated microbiota following hookworm infection and consecutive gluten challenges in humans with coeliac disease
Q38881069Changes in intestinal microbiota composition and metabolism coincide with increased intestinal permeability in young adults under prolonged physiological stress
Q57110689Changes in microbiota composition, bile and fatty acid metabolism, in successful faecal microbiota transplantation for Clostridioides difficile infection
Q47729013Changes in mouse gut bacterial community in response to different types of drinking water
Q90663251Changes in soil bacterial community diversity following the removal of invasive feral pigs from a Hawaiian tropical montane wet forest
Q99634706Changes in the Bacterial Diversity of Human Milk during Late Lactation Period (Weeks 21 to 48)
Q90721308Changes in the Bacterioplankton Community Structure from Southern Gulf of Mexico During a Simulated Crude Oil Spill at Mesocosm Scale
Q35068521Changes in the equine fecal microbiota associated with the use of systemic antimicrobial drugs
Q58778319Changes in the gut microbiota composition during pregnancy in patients with gestational diabetes mellitus (GDM)
Q36245642Characterisation of Early-Life Fecal Microbiota in Susceptible and Healthy Pigs to Post-Weaning Diarrhoea
Q57177101Characteristics of microbial communities and intestinal pathogenic bacteria for migrated Larus ridibundus in southwest China
Q35632199Characterization and comparison of the bacterial microbiota in different gastrointestinal tract compartments in horses.
Q28552628Characterization of Bacterial Communities in Selected Smokeless Tobacco Products Using 16S rDNA Analysis
Q47105126Characterization of Bacterial and Fungal Community Dynamics by High-Throughput Sequencing (HTS) Metabarcoding during Flax Dew-Retting
Q92404537Characterization of Distinct CyanoHABs-Related Modules in Microbial Recurrent Association Network
Q92547776Characterization of Microbiota that Influence Immunomodulatory Effects of Fermented Brassica rapa L
Q36123481Characterization of an anaerobic marine microbial community exposed to combined fluxes of perchlorate and salinity
Q39582006Characterization of an autotrophic bioreactor microbial consortium degrading thiocyanate.
Q91622963Characterization of bacterial communities in wastewater with enhanced taxonomic resolution by full-length 16S rRNA sequencing
Q36304263Characterization of bacterial community associated with phytoplankton bloom in a eutrophic lake in South Norway using 16S rRNA gene amplicon sequence analysis
Q57099069Characterization of bacterial microbiota compositions along the intestinal tract in pigs and their interactions and functions
Q59796046Characterization of bacterioplankton communities and quantification of organic carbon pools off the Galapagos Archipelago under contrasting environmental conditions
Q28652462Characterization of shed medicinal leech mucus reveals a diverse microbiota
Q35091450Characterization of the 18S rRNA gene for designing universal eukaryote specific primers.
Q33698507Characterization of the Fecal Bacterial Microbiota of Healthy and Diarrheic Dairy Calves.
Q58745364Characterization of the Microbial Population Inhabiting a Solar Saltern Pond of the Odiel Marshlands (SW Spain)
Q90723701Characterization of the Spoilage Microbiota of Hake Fillets Packaged Under a Modified Atmosphere (MAP) Rich in CO2 (50% CO2/50% N2) and Stored at Different Temperatures
Q39709935Characterization of the cyanobacteria and associated bacterial community from an ephemeral wetland in New Zealand.
Q64939953Characterization of the microbiota and volatile components of kocho, a traditional fermented food of Ethiopia.
Q63070990Characterization of the total and viable bacterial and fungal communities associated with the International Space Station surfaces
Q46257810Characterization of the upper and lower respiratory tract microbiota in Piedmontese calves
Q94538965Characterizing changes in soil microbiome abundance and diversity due to different cover crop techniques
Q64064499Chemosynthetic ectosymbionts associated with a shallow-water marine nematode
Q36009147Chitin Mixed in Potting Soil Alters Lettuce Growth, the Survival of Zoonotic Bacteria on the Leaves and Associated Rhizosphere Microbiology
Q35829346Chromosome-Directed PCR-Based Detection and Quantification of Bacillus cereus Group Members with Focus on B. thuringiensis Serovar israelensis Active against Nematoceran Larvae
Q35891064Chytrids dominate arctic marine fungal communities
Q58595872Cigarette Smoking Modulation of Saliva Microbial Composition and Cytokine Levels
Q34489554Cleanroom Maintenance Significantly Reduces Abundance but Not Diversity of Indoor Microbiomes
Q35965445Cleansing effect of acidic L-arginine on human oral biofilm
Q31140323Climate-related changes of soil characteristics affect bacterial community composition and function of high altitude and latitude lakes
Q52338725Close Link Between Harmful Cyanobacterial Dominance and Associated Bacterioplankton in a Tropical Eutrophic Reservoir.
Q48034903Close association of active nitrifiers with Beggiatoa mats covering deep-sea hydrothermal sediments
Q92002951Co-cultivation of the marine sponge Halichondria panicea and its associated microorganisms
Q36875170Co-occurrence Analysis of Microbial Taxa in the Atlantic Ocean Reveals High Connectivity in the Free-Living Bacterioplankton
Q38841073Codiversification of gastrointestinal microbiota and phylogeny in passerines is not explained by ecological divergence.
Q91044866ColPortal, an integrative multiomic platform for analysing epigenetic interactions in colorectal cancer
Q92574336Cold anammox process and reduced graphene oxide - Varieties of effects during long-term interaction
Q64258453Colitis-induced colorectal cancer and intestinal epithelial estrogen receptor beta impact gut microbiota diversity
Q91595041Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease
Q46496889Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut.
Q40350705Colonization with Helicobacter is concomitant with modified gut microbiota and drastic failure of the immune control of Mycobacterium tuberculosis.
Q90781550Colonizing multidrug-resistant bacteria and the longitudinal evolution of the intestinal microbiome after liver transplantation
Q35547689Colostrum of healthy Slovenian mothers: microbiota composition and bacteriocin gene prevalence
Q94445771Combined bacterial and fungal targeted amplicon sequencing of respiratory samples: Does the DNA extraction method matter?
Q42024226Community Structure of Lithotrophically-Driven Hydrothermal Microbial Mats from the Mariana Arc and Back-Arc
Q89509088Community Structure, Diversity and Potential of Endophytic Bacteria in the Primitive New Zealand Medicinal Plant Pseudowintera colorata
Q35638769Community shifts in a well-operating agricultural biogas plant: how process variations are handled by the microbiome.
Q89783565Comparative Analysis of Fecal Microbiota in Grasscutter (Thryonomys swinderianus) and Other Herbivorous Livestock in Ghana
Q41912817Comparative Evaluation of Four Bacteria-Specific Primer Pairs for 16S rRNA Gene Surveys.
Q49185001Comparative analyses of fecal microbiota in Chinese isolated Yao population, minority Zhuang and rural Han by 16sRNA sequencing.
Q36162144Comparative analysis of the fecal bacterial community of five harbor seals (Phoca vitulina).
Q58700541Comparative assessment of autochthonous bacterial and fungal communities and microbial biomarkers of polluted agricultural soils of the Terra dei Fuochi
Q56927741Comparing 16S rDNA amplicon sequencing and hybridization capture for pea aphid microbiota diversity analysis
Q104616962Comparing Circadian Rhythmicity in the Human Gut Microbiome
Q92349065Comparison of Bacterial Populations in the Ceca of Swine at Two Different Stages and their Functional Annotations
Q52668342Comparison of Meconium DNA Extraction Methods for Use in Microbiome Studies.
Q37740092Comparison of fecal microbiota of three captive carnivore species inhabiting Korea
Q59793002Comparison of microbiota and allergen profile in house dust from homes of allergic and non-allergic subjects- results from the GUSTO study
Q93079601Comparison of the Modulatory Effect on Intestinal Microbiota between Raw and Bran-Fried Atractylodis Rhizoma in the Rat Model of Spleen-Deficiency Syndrome
Q52691974Comparison of the fecal microbiota of domestic commercial meat, laboratory, companion, and shelter rabbits (Oryctolagus cuniculi).
Q91861434Comparison of the ruminal and fecal microbiotas in beef calves supplemented or not with concentrate
Q58803872Comparison of the upper and lower airway microbiota in children with chronic lung diseases
Q35929043Complementary Microorganisms in Highly Corrosive Biofilms from an Offshore Oil Production Facility.
Q55517606Complex ecological interactions of Staphylococcus aureus in tampons during menstruation.
Q91465903Complex food webs coincide with high genetic potential for chemolithoautotrophy in fractured bedrock groundwater
Q92742279Composition and dynamics of the bacterial communities present in the post-slaughter environment of farmed Atlantic salmon (Salmo salar L.) and correlations to gelatin degrading activity
Q92357005Composition, Diversity and Functional Analysis of the Modern Microbiome of the Middle Triassic Cava Superiore Beds (Monte San Giorgio, Switzerland)
Q58122101Comprehensive Longitudinal Microbiome Analysis of the Chicken Cecum Reveals a Shift From Competitive to Environmental Drivers and a Window of Opportunity for
Q36172390Comprehensive detection and identification of bacterial DNA in the blood of patients with sepsis and healthy volunteers using next-generation sequencing method - the observation of DNAemia
Q55322452Comprehensive skin microbiome analysis reveals the uniqueness of human skin and evidence for phylosymbiosis within the class Mammalia.
Q33856358Concurrent Methane Production and Oxidation in Surface Sediment from Aarhus Bay, Denmark.
Q96577373Conglobatins B-E: cytotoxic analogues of the C2-symmetric macrodiolide conglobatin
Q26739715Considerations For Optimizing Microbiome Analysis Using a Marker Gene
Q89965281Consistency of Targeted Metatranscriptomics and Morphological Characterization of Phytoplankton Communities
Q93051972Construction of Simplified Microbial Consortia to Degrade Recalcitrant Materials Based on Enrichment and Dilution-to-Extinction Cultures
Q96229575Consumption of a high energy density diet triggers microbiota dysbiosis, hepatic lipidosis, and microglia activation in the nucleus of the solitary tract in rats
Q97420692Continent-Scale Sampling Reveals Fine-Scale Turnover in a Beneficial Bug Symbiont
Q112284485Contrasting Effects of Local Environmental and Biogeographic Factors on the Composition and Structure of Bacterial Communities in Arid Monospecific Mangrove Soils
Q64102335Contrasting Pathways for Anaerobic Methane Oxidation in Gulf of Mexico Cold Seep Sediments
Q92404648Contrasting Winter Versus Summer Microbial Communities and Metabolic Functions in a Permafrost Thaw Lake
Q33848385Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand
Q91665709Contrasting microbial community responses to salinization and straw amendment in a semiarid bare soil and its wheat rhizosphere
Q57889593Controls on microalgal community structures in cryoconite holes upon high-Arctic glaciers, Svalbard
Q55092070Convergent shifts in host-associated microbial communities across environmentally elicited phenotypes.
Q60916326Copper Affects Composition and Functioning of Microbial Communities in Marine Biofilms at Environmentally Relevant Concentrations
Q47552758Corallivory and the microbial debacle in two branching scleractinians
Q55432597Core versus diet-associated and postprandial bacterial communities of the rainbow trout (Oncorhynchus mykiss) midgut and faeces.
Q28818739Cowpea Nodules Harbor Non-rhizobial Bacterial Communities that Are Shaped by Soil Type Rather than Plant Genotype
Q38604861Crop Establishment Practices Are a Driver of the Plant Microbiota in Winter Oilseed Rape (Brassica napus).
Q90242259Crop Rotations and Poultry Litter Affect Dynamic Soil Chemical Properties and Soil Biota Long Term
Q35665378Crustal fluid and ash alteration impacts on the biosphere of Shikoku Basin sediments, Nankai Trough, Japan.
Q35835638Cultivating microbial dark matter in benzene-degrading methanogenic consortia
Q98771929Culture-Dependent and Sequencing Methods Revealed the Absence of a Bacterial Community Residing in the Urine of Healthy Cats
Q93035799Culture-dependent and metagenomic analysis of lesser horseshoe bats' gut microbiome revealing unique bacterial diversity and signatures of potential human pathogens
Q50332885Current Bioinformatics resources in combating infectious diseases.
Q54714205Cyanobacteria in New Zealand indigenous grasslands
Q38604858Cyanobacterial Allelochemicals But Not Cyanobacterial Cells Markedly Reduce Microbial Community Diversity.
Q34311426DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match
Q64064021DSM 32315 Supplementation Attenuates the Effects of Challenge on the Growth Performance and Intestinal Microbiota of Broiler Chickens
Q64065303Darkening of the Greenland Ice Sheet: Fungal Abundance and Diversity Are Associated With Algal Bloom
Q92345531Dataset of soil bacterial compositions and biochemical properties of a Moso bamboo forest under mulching-intensive management
Q35213234Deciphering chicken gut microbial dynamics based on high-throughput 16S rRNA metagenomics analyses
Q37589434Deciphering composition and function of the root microbiome of a legume plant.
Q41065920Deciphering functional diversification within the lichen microbiota by meta-omics
Q58699156Deciphering intra-species bacterial diversity of meat and seafood spoilage microbiota using gyrB amplicon sequencing: A comparative analysis with 16S rDNA V3-V4 amplicon sequencing
Q39923601Deciphering microbial interactions and detecting keystone species with co-occurrence networks
Q30221761Decreased gut microbiota diversity, delayed Bacteroidetes colonisation and reduced Th1 responses in infants delivered by caesarean section
Q92901409Deficiency of Dietary Fiber in Slc5a8-Null Mice Promotes Bacterial Dysbiosis and Alters Colonic Epithelial Transcriptome towards Proinflammatory Milieu
Q55384392Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies.
Q92432604Defining the human gut host-phage network through single-cell viral tagging
Q92984305Defoliation management and grass growth habits modulated the soil microbial community of turfgrass systems
Q30209751DegePrime, a program for degenerate primer design for broad-taxonomic-range PCR in microbial ecology studies
Q39459480Dense water plumes modulate richness and productivity of deep sea microbes.
Q30684602Deoxygenation alters bacterial diversity and community composition in the ocean's largest oxygen minimum zone
Q90630010Depletion of Blautia Species in the Microbiota of Obese Children Relates to Intestinal Inflammation and Metabolic Phenotype Worsening
Q60303171Desert plant bacteria reveal host influence and beneficial plant growth properties
Q61805098Design and Assessment of Species-Level qPCR Primers Targeting Comammox
Q37287114Design and Evaluation of Illumina MiSeq-Compatible, 18S rRNA Gene-Specific Primers for Improved Characterization of Mixed Phototrophic Communities
Q37707257Design and experimental application of a novel non-degenerate universal primer set that amplifies prokaryotic 16S rRNA genes with a low possibility to amplify eukaryotic rRNA genes.
Q48011894Design features of offshore oil production platforms influence their susceptibility to biocorrosion
Q89513709Design of targeted primers based on 16S rRNA sequences in meta-transcriptomic datasets and identification of a novel taxonomic group in the Asgard archaea
Q35072519Detailed analysis of the microbial population in Malaysian spontaneous cocoa pulp fermentations reveals a core and variable microbiota
Q58585516Detecting Associations Between Ciliated Protists and Prokaryotes with Culture-Independent Single-Cell Microbiomics: a Proof-of-Concept Study
Q45943740Detecting macroecological patterns in bacterial communities across independent studies of global soils.
Q35493056Detection and analysis of elusive members of a novel and diverse archaeal community within a thermal spring streamer consortium
Q49365353Detection of 16S rRNA and KPC Genes from Complex Matrix Utilizing a Molecular Inversion Probe Assay for Next-Generation Sequencing.
Q41295013Detection of Elizabethkingia spp. in Culicoides Biting Midges, Australia
Q58576188Detection of an amplification bias associated to Leuconostocaceae family with a universal primer routinely used for monitoring microbial community structures within food products
Q49650701Determinants of Reduced Genetic Capacity for Butyrate Synthesis by the Gut Microbiome in Crohn's Disease and Ulcerative Colitis.
Q64244152Determination of Microbial Maintenance in Acetogenesis and Methanogenesis by Experimental and Modeling Techniques
Q38645160Determination of Resistant Starch Assimilating Bacteria in Fecal Samples of Mice by In vitro RNA-Based Stable Isotope Probing.
Q47773664Development of a Stable Lung Microbiome in Healthy Neonatal Mice
Q34075659Development of a prokaryotic universal primer for simultaneous analysis of Bacteria and Archaea using next-generation sequencing
Q35909932Development of an Analysis Pipeline Characterizing Multiple Hypervariable Regions of 16S rRNA Using Mock Samples
Q91667073Development of quantitative PCR for the detection of Alkalilimnicola ehrlichii, Thioalkalivibrio sulfidiphilus and Thioalkalibacter halophilus in gas biodesulfurization processes
Q46646256Development of the faecal microbiota in foals.
Q35939847Diagnosis of Bacterial Bloodstream Infections: A 16S Metagenomics Approach
Q91854981Diel changes and diversity of pufM expression in freshwater communities of anoxygenic phototrophic bacteria
Q90170663Diel patterning in the bacterial community associated with the sea anemone Nematostella vectensis
Q57173953Diet Can Impact Microbiota Composition in Children With Autism Spectrum Disorder
Q64084934Diet Rich in Animal Protein Promotes Pro-inflammatory Macrophage Response and Exacerbates Colitis in Mice
Q90194160Diet and diet-associated bacteria shape early microbiome development in Yellowtail Kingfish (Seriola lalandi)
Q34491890Diet disparity among sympatric herbivorous cichlids in the same ecomorphs in Lake Tanganyika: amplicon pyrosequences on algal farms and stomach contents
Q64228621Diet in the Driving Seat: Natural Diet-Immunity-Microbiome Interactions in Wild Fish
Q36874983Dietary Shifts May Trigger Dysbiosis and Mucous Stools in Giant Pandas (Ailuropoda melanoleuca).
Q49166707Dietary changes during weaning shape the gut microbiota of red pandas (Ailurus fulgens).
Q43152303Dietary coconut water vinegar for improvement of obesity-associated inflammation in high-fat-diet-treated mice.
Q92928407Dietary effects on gut microbiota of the mesquite lizard Sceloporus grammicus (Wiegmann, 1828) across different altitudes
Q92965224Dietary intake influences gut microbiota development of healthy Australian children from the age of one to two years
Q108444130Dietary nanoparticles alter the composition and function of the gut microbiota in mice at dose levels relevant for human exposure
Q91946417Difference of gut microbiota composition based on the body condition scores in dogs
Q36277135Differences in gut microbiota profile between women with active lifestyle and sedentary women.
Q91891849Differences in the intestinal microbiome of healthy children and patients with newly diagnosed Crohn's disease
Q30840790Different Bacterial Communities Involved in Peptide Decomposition between Normoxic and Hypoxic Coastal Waters
Q36286194Different antibiotic growth promoters induce specific changes in the cecal microbiota membership of broiler chicken
Q59329579Different laboratory populations similar bacterial profile? The case of Glossina palpalis gambiensis
Q46238626Differential Engagement of Fermentative Taxa in Gut Contents of the Earthworm Lumbricus terrestris
Q51759157Differential Susceptibility to T Cell-Induced Colitis in Mice: Role of the Intestinal Microbiota.
Q64125362Differential abundance and core members of the bacterial community associated with wild male Zeugodacus cucurbitae fruit flies (Insecta: Tephritidae) from three geographical regions of Southeast Asia
Q47160438Differentially Regulated Host Proteins Associated with Chronic Rhinosinusitis Are Correlated with the Sinonasal Microbiome
Q46906742Dilution cultivation of marine heterotrophic bacteria abundant after a spring phytoplankton bloom in the North Sea.
Q39438117Direct 16S rRNA-seq from bacterial communities: a PCR-independent approach to simultaneously assess microbial diversity and functional activity potential of each taxon
Q56383248Direct and indirect effects of native range expansion on soil microbial community structure and function
Q57098387Direct-fed microbial supplementation influences the bacteria community composition of the gastrointestinal tract of pre- and post-weaned calves
Q92860149Discovery of Afifi, the shallowest and southernmost brine pool reported in the Red Sea
Q91694814Disentangling the complex microbial community of coral reefs using standardized Autonomous Reef Monitoring Structures (ARMS)
Q45359207Dissecting the deep biosphere: retrieving authentic microbial communities from packer-isolated deep crystalline bedrock fracture zones
Q89471023Dissecting the factors shaping fish skin microbiomes in a heterogeneous inland water system
Q91971573Distinct Taxonomic and Functional Profiles of the Microbiome Associated With Different Soil Horizons of a Moist Tussock Tundra in Alaska
Q33824299Distinct patterns in the gut microbiota after surgical or medical therapy in obese patients
Q27324327Distribution and Composition of Thiotrophic Mats in the Hypoxic Zone of the Black Sea (150-170 m Water Depth, Crimea Margin)
Q39452428Distribution and activity of the anaerobic methanotrophic community in a nitrogen-fertilized Italian paddy soil
Q46269198Distribution and phylogeny of microsymbionts associated with cowpea (Vigna unguiculata) nodulation in three agro-ecological regions of Mozambique
Q50114492Distribution of triclosan-resistant genes in major pathogenic microorganisms revealed by metagenome and genome-wide analysis.
Q58611288Diversity and Coding Potential of the Microbiota in the Photic and Aphotic Zones of Tropical Man-Made Lake with Intensive Aquaculture Activities: a Case Study on Temengor Lake, Malaysia
Q46250587Diversity and Cyclical Seasonal Transitions in the Bacterial Community in a Large and Deep Perialpine Lake
Q55311422Diversity and community structure of marine microbes around the Benham Rise underwater plateau, northeastern Philippines.
Q64981198Diversity and relative abundance of ammonia- and nitrite-oxidizing microorganisms in the offshore Namibian hypoxic zone.
Q38658302Diversity and stability of coral endolithic microbial communities at a naturally high pCO2 reef
Q38614068Diversity and temporal shifts of the bacterial community associated with a toxic cyanobacterial bloom: An interplay between microcystin producers and degraders
Q33647179Diversity is the question, not the answer
Q94502084Diversity of the bacteria in the roots of sugarcane used to produce Wasanbon in Kagawa, Japan
Q35149836Diversity of thermophiles in a Malaysian hot spring determined using 16S rRNA and shotgun metagenome sequencing
Q37212792Diversity, Biogeography, and Biodegradation Potential of Actinobacteria in the Deep-Sea Sediments along the Southwest Indian Ridge
Q90600254Diversity, Tissue Localization, and Infection Pattern of Bacterial Symbionts of the White-Backed Planthopper, Sogatella furcifera (Hemiptera: Delphacidae)
Q28817548Do biofilm communities respond to the chemical signatures of fracking? A test involving streams in North-central Arkansas
Q62646622Does the human placenta delivered at term have a microbiota? Results of cultivation, quantitative real-time PCR, 16S rRNA gene sequencing, and metagenomics
Q35717772Dominance of rumen microorganisms during cheese whey acidification: acidogenesis can be governed by a rare Selenomonas lacticifex-type fermentation
Q42202187Dominant Groups of Potentially Active Bacteria Shared by Barley Seeds become Less Abundant in Root Associated Microbiome
Q91596436Donor-derived IL-17A and IL-17F deficiency triggers Th1 allo-responses and increases gut leakage during acute GVHD
Q92783463Dose-Dependent Alterations to In Vitro Human Microbiota Composition and Butyrate Inhibition by a Supercritical Carbon Dioxide Hops Extract
Q63943178Drinking water bacterial communities exhibit specific and selective necrotrophic growth
Q92188025Drivers and patterns of microbial community assembly in a Lyme disease vector
Q46423152Drunk bugs: Chronic vapour alcohol exposure induces marked changes in the gut microbiome in mice
Q47704011Drylands soil bacterial community is affected by land use change and different irrigation practices in the Mezquital Valley, Mexico.
Q92668221Dual and Triple Epithelial Coculture Model Systems with Donor-Derived Microbiota and THP-1 Macrophages To Mimic Host-Microbe Interactions in the Human Sinonasal Cavities
Q92006400Dual bloom of green algae and purple bacteria in an extremely shallow soda pan
Q90579695Dynamics and Biodiversity of Bacterial and Yeast Communities during Fermentation of Cocoa Beans
Q93090967Dynamics of Vaginal and Rectal Microbiota Over Several Menstrual Cycles in Female Cynomolgus Macaques
Q46269798Dynamics of coral-associated bacterial communities acclimated to temperature stress based on recent thermal history
Q94544537Dynamics of the bacterial gut microbiota in preterm and term infants after intravenous amoxicillin/ceftazidime treatment
Q100758619Dysbiosis of the gut microbiota maybe exacerbate orf pathology by promoting inflammatory immune responses
Q36058824Early Gut Microbiota Perturbations Following Intrapartum Antibiotic Prophylaxis to Prevent Group B Streptococcal Disease
Q55415738Early Salmonella Typhimurium infection in pigs disrupts Microbiome composition and functionality principally at the ileum mucosa.
Q64119352Early gut microbiota signature of aGvHD in children given allogeneic hematopoietic cell transplantation for hematological disorders
Q91619974Early life nutrition influences susceptibility to chronic inflammatory colitis in later life
Q57793286Ecologically informed microbial biomarkers and accurate classification of mixed and unmixed samples in an extensive cross-study of human body sites
Q36174419Effect of Bifidobacterium breve on the Intestinal Microbiota of Coeliac Children on a Gluten Free Diet: A Pilot Study.
Q38769197Effect of Biostimulation Using Sewage Sludge, Soybean Meal, and Wheat Straw on Oil Degradation and Bacterial Community Composition in a Contaminated Desert Soil
Q92071434Effect of Diet on the Enteric Microbiome of the Wood-Eating Catfish Panaque nigrolineatus
Q38598821Effect of Pre-weaning Diet on the Ruminal Archaeal, Bacterial, and Fungal Communities of Dairy Calves
Q41006153Effect of Silver or Copper Nanoparticles-Dispersed Silane Coatings on Biofilm Formation in Cooling Water Systems
Q38670668Effect of Sweetened Dried Cranberry Consumption on Urinary Proteome and Fecal Microbiome in Healthy Human Subjects
Q55413458Effect of a Protein Supplement on the Gut Microbiota of Endurance Athletes: A Randomized, Controlled, Double-Blind Pilot Study.
Q49923809Effect of antibiotic withdrawal in feed on chicken gut microbial dynamics, immunity, growth performance and prevalence of foodborne pathogens.
Q41696821Effect of caloric restriction on gut permeability, inflammation markers, and fecal microbiota in obese women
Q95275182Effect of flavophospholipol on fecal microbiota in weaned pigs challenged with Salmonella Typhimurium
Q89747767Effect of mannan oligosaccharides on the microbiota and productivity parameters of Litopenaeus vannamei shrimp under intensive cultivation in Ecuador
Q36108822Effects of 16S rDNA sampling on estimates of the number of endosymbiont lineages in sucking lice
Q39093585Effects of Actinomycete Secondary Metabolites on Sediment Microbial Communities
Q93051792Effects of Bacillus velezensis FKM10 for Promoting the Growth of Malus hupehensis Rehd. and Inhibiting Fusarium verticillioides
Q64967422Effects of Bifidobacterium longum and Lactobacillus rhamnosus on Gut Microbiota in Patients with Lactose Intolerance and Persisting Functional Gastrointestinal Symptoms: A Randomised, Double-Blind, Cross-Over Study.
Q55279204Effects of Ice-Algal Aggregate Export on the Connectivity of Bacterial Communities in the Central Arctic Ocean.
Q34524028Effects of Isoflavone-Enriched Feed on the Rumen Microbiota in Dairy Cows
Q33875580Effects of Physiochemical Factors on Prokaryotic Biodiversity in Malaysian Circumneutral Hot Springs.
Q93126164Effects of Regular Kefir Consumption on Gut Microbiota in Patients with Metabolic Syndrome: A Parallel-Group, Randomized, Controlled Study
Q90193733Effects of a Resident Yeast from the Honeybee Gut on Immunity, Microbiota, and Nosema Disease
Q95279120Effects of a deep-sea mining experiment on seafloor microbial communities and functions after 26 years
Q64115612Effects of a phytogenic, alone and associated with potassium diformate, on tilapia growth, immunity, gut microbiome and resistance against francisellosis
Q104111269Effects of dietary organic acids and nature identical compounds on growth, immune parameters and gut microbiota of European sea bass
Q89580379Effects of encapsulated cinnamaldehyde and citral on the performance and cecal microbiota of broilers vaccinated or not vaccinated against coccidiosis
Q47221556Effects of high-concentration influent suspended solids on aerobic granulation in pilot-scale sequencing batch reactors treating real domestic wastewater
Q37326131Effects of probiotics (Vivomixx®) in obese pregnant women and their newborn: study protocol for a randomized controlled trial.
Q99615698Effects of proton pump inhibitor use on the esophageal microbial community
Q39001128Effects of the Dietary Protein and Carbohydrate Ratio on Gut Microbiomes in Dogs of Different Body Conditions
Q57738913Effects of the biocides on the culturable house dust-borne bacterial compositions and diversities
Q91791786Efficacy of metabarcoding for identification of fish eggs evaluated with mock communities
Q90309229Egyptian Mongoose (Herpestes ichneumon) Gut Microbiota: Taxonomical and Functional Differences across Sex and Age Classes
Q58803386Eighteen-Year Farming Management Moderately Shapes the Soil Microbial Community Structure but Promotes Habitat-Specific Taxa
Q59132928Elevated CO Has Little Influence on the Bacterial Communities Associated With the pH-Tolerant Coral, Massive spp
Q35023973Emergence shapes the structure of the seed microbiota
Q46279368Empirical, Metagenomic, and Computational Techniques Illuminate the Mechanisms by which Fungicides Compromise Bee Health.
Q64117453Encrustations on ureteral stents from patients without urinary tract infection reveal distinct urotypes and a low bacterial load
Q33458543Endemic hydrothermal vent species identified in the open ocean seed bank
Q89834760Endophytic Bacterial Microbiome Diversity in Early Developmental Stage Plant Tissues of Wheat Varieties
Q33616599Engineered Resistant-Starch (ERS) Diet Shapes Colon Microbiota Profile in Parallel with the Retardation of Tumor Growth in In Vitro and In Vivo Pancreatic Cancer Models
Q37697443Enrichment of Cryoconite Hole Anaerobes: Implications for the Subglacial Microbiome
Q41508234Enrichment of anaerobic nitrate-dependent methanotrophic 'Candidatus Methanoperedens nitroreducens' archaea from an Italian paddy field soil.
Q91809676Enteral Nutrition in Pediatric Patients Undergoing Hematopoietic SCT Promotes the Recovery of Gut Microbiome Homeostasis
Q36969934Enterocyte-Associated Microbiome of the Hadza Hunter-Gatherers
Q92266266Enterotype-based Analysis of Gut Microbiota along the Conventional Adenoma-Carcinoma Colorectal Cancer Pathway
Q59812471Environmental Drivers of Free-Living vs. Particle-Attached Bacterial Community Composition in the Mauritania Upwelling System
Q56891942Environmental and Biological Influences on Carbonate Precipitation Within Hot Spring Microbial Mats in Little Hot Creek, CA
Q37481958Environmental and physiological factors shape the gut microbiota of Atlantic salmon parr (Salmo salar L.).
Q46406180Environmental influences on the skin microbiome of humans and cattle in rural Madagascar.
Q89503220Environmental plasticity and colonisation history in the Atlantic salmon microbiome: A translocation experiment
Q91608129Environmental selection shapes the formation of near-surface groundwater microbiomes
Q39019297Epilithic and endolithic microorganisms and deterioration on stone church facades subject to urban pollution in a sub-tropical climate.
Q45881535Establishment of in vitro soybean aphids, Aphis glycines (Hemiptera: Aphididae): a tool to facilitate studies of aphid symbionts, plant-insect interactions and insecticide efficacy
Q35542835Estimating bacterial diversity for ecological studies: methods, metrics, and assumptions
Q28648162Eubacteria and archaea communities in seven mesophile anaerobic digester plants in Germany
Q55516308Evaluating Established Methods for Rumen 16S rRNA Amplicon Sequencing With Mock Microbial Populations.
Q58575956Evaluating gut microbiota profiles from archived fecal samples
Q38752397Evaluating the Detection of Hydrocarbon-Degrading Bacteria in 16S rRNA Gene Sequencing Surveys
Q36252615Evaluating the Impact of DNA Extraction Method on the Representation of Human Oral Bacterial and Fungal Communities
Q33742872Evaluating the accuracy of amplicon-based microbiome computational pipelines on simulated human gut microbial communities
Q35094598Evaluating variation in human gut microbiota profiles due to DNA extraction method and inter-subject differences
Q40961915Evaluation and optimization of PCR primers for selective and quantitative detection of marine ANME subclusters involved in sulfate-dependent anaerobic methane oxidation
Q37196456Evaluation of 16S rRNA Gene Primer Pairs for Monitoring Microbial Community Structures Showed High Reproducibility within and Low Comparability between Datasets Generated with Multiple Archaeal and Bacterial Primer Pairs.
Q92444245Evaluation of Bioaerosol Bacterial Components of a Wastewater Treatment Plant Through an Integrate Approach and In Vivo Assessment
Q64073413Evaluation of Black Soldier Fly () Larvae and Pre-Pupae Raised on Household Organic Waste, as Potential Ingredients for Poultry Feed
Q35928445Evaluation of Enrichment Protocols for Bacterial Endosymbionts of Ciliates by Real-Time PCR.
Q91707751Evaluation of Human Milk Microbiota by 16S rRNA Gene Next-Generation Sequencing (NGS) and Cultivation/MALDI-TOF Mass Spectrometry Identification
Q98158822Evaluation of PCR conditions for characterizing bacterial communities with full-length 16S rRNA genes using a portable nanopore sequencer
Q30828702Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification
Q59132839Evaluation of Sialyllactose Supplementation of a Prebiotic-Containing Formula on Growth, Intestinal Development, and Bacterial Colonization in the Neonatal Piglet
Q55502711Evaluation of the impact of dental prophylaxis on the oral microbiota of dogs.
Q45973674Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples.
Q99205301Evidence for Elton's diversity-invasibility hypothesis from belowground
Q91155385Evidence for host effect on the intestinal microbiota of whitefish (Coregonus sp.) species pairs and their hybrids
Q98780139Evolution of the environmental microbiota of a new neonatal intensive care unit (NICU) and implications for infection prevention and control
Q92560075Expanding our view of Bartonella and its hosts: Bartonella in nest ectoparasites and their migratory avian hosts
Q36442589Expanding the World of Marine Bacterial and Archaeal Clades
Q92078695Exploiting the unwanted: Sulphate reduction enables phosphate recovery from energy-rich sludge during anaerobic digestion
Q97539057Exploring bacteria diversity in commercialized table olive biofilms by metataxonomic and compositional data analysis
Q92188618Exploring the Archaeome: Detection of Archaeal Signatures in the Human Body
Q30360883Exploring the Impacts of Anthropogenic Disturbance on Seawater and Sediment Microbial Communities in Korean Coastal Waters Using Metagenomics Analysis.
Q99635051Exploring the Role of Gut Microbiota in Major Depressive Disorder and in Treatment Resistance to Antidepressants
Q64077589Exploring the bacteriome in anthropophilic ticks: To investigate the vectors for diagnosis
Q56335637Exploring the pathology of an epidermal disease affecting a circum-Antarctic sea star
Q42362150Exploring the salivary microbiome of children stratified by the oral hygiene index.
Q62579853Exposure to synthetic hydraulic fracturing waste influences the mucosal bacterial community structure of the brook trout ( Salvelinus fontinalis ) epidermis
Q90411003Extending Burk Dehority's Perspectives on the Role of Ciliate Protozoa in the Rumen
Q90227228Factors Influencing Microbiological Biodiversity of Human Foot Skin
Q55514071Facultative methanotrophs are abundant at terrestrial natural gas seeps.
Q38616723Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp.
Q37682227Fecal Bacterial Communities in treated HIV infected individuals on two antiretroviral regimens
Q92633075Fecal Microbiota Transplantation Prevents Intestinal Injury, Upregulation of Toll-Like Receptors, and 5-Fluorouracil/Oxaliplatin-Induced Toxicity in Colorectal Cancer
Q61448790Fecal Microbiota of Toxigenic -Associated Diarrhea
Q59129820Fecal bacterial microbiota of Canadian commercial mink (Neovison vison): Yearly, life stage, and seasonal comparisons
Q58553370Fecal microbiota associated with phytohaemagglutinin-induced immune response in nestlings of a passerine bird
Q100737006Fecal microbiota transplantation from warthog to pig confirms the influence of the gut microbiota on African swine fever susceptibility
Q102369282Feed additives for the control of post-weaning Streptococcus suis disease and the effect on the faecal and nasal microbiota
Q44876939Fermentation Cover Brine Reformulation for Cucumber Processing with Low Salt to Reduce Bloater Defect
Q51337674Feruloylated Oligosaccharides from Maize Bran Modulated the Gut Microbiota in Rats.
Q91782230Finding Functional Differences Between Species in a Microbial Community: Case Studies in Wine Fermentation and Kefir Culture
Q92712290First Insights Into Bacterial Gastrointestinal Tract Communities of the Eurasian Beaver (Castor fiber)
Q46261370First Insights into the Diverse Human Archaeome: Specific Detection of Archaea in the Gastrointestinal Tract, Lung, and Nose and on Skin.
Q97521331First Report on the Plasmidome From a High-Altitude Lake of the Andean Puna
Q58695757First insight into microbiome profile of fungivorous thrips Hoplothrips carpathicus (Insecta: Thysanoptera) at different developmental stages: molecular evidence of Wolbachia endosymbiosis
Q92857570Fishing in the Soup - Pathogen Detection in Food Safety Using Metabarcoding and Metagenomic Sequencing
Q42117936Floc Formation Reduces the pH Stress Experienced by Microorganisms Living in Alkaline Environments.
Q89965375Formation of a Mixed-Species Biofilm Is a Survival Strategy for Unculturable Lactic Acid Bacteria and Saccharomyces cerevisiae in Daqu, a Chinese Traditional Fermentation Starter
Q90395527Fouling Microbial Communities on Plastics Compared with Wood and Steel: Are They Substrate- or Location-Specific?
Q46238622Frankia diversity in host-plant root nodules is independent of abundance or relative diversity of Frankia in corresponding rhizosphere soils
Q64068078Freezing Tolerance of Thermophilic Bacterial Endospores in Marine Sediments
Q33646265From Vineyard Soil to Wine Fermentation: Microbiome Approximations to Explain the "terroir" Concept
Q38687371From grass to gas: microbiome dynamics of grass biomass acidification under mesophilic and thermophilic temperatures.
Q92287735Fungal and bacterial diversity of Svalbard subglacial ice
Q61808399Gastric infection perturbs human oral microbiota
Q89560972Gastrointestinal Tolerance and Microbiome Response to Snacks Fortified with Pea Hull Fiber: A Randomized Trial in Older Adults
Q38837562Gastroparesis and lipid metabolism-associated dysbiosis in Wistar-Kyoto rats
Q64058753Gender-Specific Associations Between Saliva Microbiota and Body Size
Q99607983Generation of Comprehensive Ecosystem-Specific Reference Databases with Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene Sequencing and Automated Taxonomy Assignment (AutoTax)
Q110532898Genetic detection of freshwater harmful algal blooms: A review focused on the use of environmental DNA (eDNA) in Microcystis aeruginosa and Prymnesium parvum
Q38654389Genome sequence and composition of a tolyporphin-producing cyanobacterium-microbial community
Q61445485Genomic Analyses of Acute Flaccid Myelitis Cases among a Cluster in Arizona Provide Further Evidence of Enterovirus D68 Role
Q98280881Genomic and enzymatic evidence of acetogenesis by anaerobic methanotrophic archaea
Q64264544Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya
Q47722522Geobacteraceae are important members of mercury-methylating microbial communities of sediments impacted by waste water releases
Q46255013Geochemical Influence on Microbial Communities at CO2-Leakage Analog Sites
Q54953760Geographical and Cultivar Features Differentiate Grape Microbiota in Northern Italy and Spain Vineyards.
Q46587659Geographically conserved microbiomes of four temperate water tunicates
Q91583846Glacial Runoff Promotes Deep Burial of Sulfur Cycling-Associated Microorganisms in Marine Sediments
Q89524274Global change-driven use of onshore habitat impacts polar bear faecal microbiota
Q92000751Global diversity and biogeography of bacterial communities in wastewater treatment plants
Q97530532Globally Abundant "Candidatus Udaeobacter" Benefits from Release of Antibiotics in Soil and Potentially Performs Trace Gas Scavenging
Q41367795Grape microbiome as a reliable and persistent signature of field origin and environmental conditions in Cannonau wine production.
Q102075387Grazing pressure-induced shift in planktonic bacterial communities with the dominance of acIII-A1 actinobacterial lineage in soda pans
Q90119234Growth and rapid succession of methanotrophs effectively limit methane release during lake overturn
Q36700356Growth rates and rRNA content of four marine bacteria in pure cultures and in the Delaware estuary
Q64271235Guanidine thiocyanate solution facilitates sample collection for plant rhizosphere microbiome analysis
Q55232425Guano exposed: Impact of aerobic conditions on bat fecal microbiota.
Q58773281Gut Bacterial Communities in Geographically Distant Populations of Farmed Sea Bream () and Sea Bass ()
Q40246188Gut Microbial Diversity in Antibiotic-Naive Children After Systemic Antibiotic Exposure: A Randomized Controlled Trial
Q47098813Gut Microbial Dysbiosis Is Associated with Altered Hepatic Functions and Serum Metabolites in Chronic Hepatitis B Patients
Q37671725Gut Microbiota Analysis Results Are Highly Dependent on the 16S rRNA Gene Target Region, Whereas the Impact of DNA Extraction Is Minor.
Q64904312Gut Microbiota and Mucin Composition in Female Broiler Chickens Fed Diets including Yellow Mealworm (Tenebrio molitor, L.).
Q90549680Gut Microbiota of Migrating Wild Rabbit Fish (Siganus guttatus) Larvae Have Low Spatial and Temporal Variability
Q42379361Gut bacterial communities of diarrheic patients with indications of Clostridioides difficile infection.
Q37698703Gut dysbiosis and neuroimmune responses to brain infection with Theiler's murine encephalomyelitis virus.
Q50097667Gut dysbiosis breaks immunological tolerance toward the central nervous system during young adulthood.
Q35635017Gut metabolites and bacterial community networks during a pilot intervention study with flaxseeds in healthy adult men.
Q52680705Gut microbial composition in patients with psoriasis.
Q47873526Gut microbiome populations are associated with structure-specific changes in white matter architecture
Q92498449Gut microbiome response to a modern Paleolithic diet in a Western lifestyle context
Q46321438Gut microbiome response to short-term dietary interventions in reactive hypoglycemia subjects
Q90065226Gut microbiome shifts with urbanization and potentially facilitates a zoonotic pathogen in a wading bird
Q89540221Gut microbiome structure and adrenocortical activity in dogs with aggressive and phobic behavioral disorders
Q92397655Gut microbiota alterations associated with reduced bone mineral density in older adults
Q63198678Gut microbiota modulation accounts for the neuroprotective properties of anthocyanins
Q64990293Gut microflora may facilitate adaptation to anthropic habitat: A comparative study in Rattus.
Q98771807H. pylori Eradication Treatment Causes Alterations in the Gut Microbiota and Blood Lipid Levels
Q64095288H. pylori eradication with antibiotic treatment causes changes in glucose homeostasis related to modifications in the gut microbiota
Q90207950Habitat and seasonality shape the structure of tench (Tinca tinca L.) gut microbiome
Q64098423Habitat-dependent composition of bacterial and fungal communities in biological soil crusts from Oman
Q35962754Helicobacter pylori Eradication Causes Perturbation of the Human Gut Microbiome in Young Adults
Q37470354Helminth infections and gut microbiota - a feline perspective
Q99587301Hereditary Hemochromatosis Promotes Colitis and Colon Cancer and Causes Bacterial Dysbiosis in Mice
Q92663510Heterogeneous development of methanogens and the correlation with bacteria in the rumen and cecum of sika deer (Cervus nippon) during early life suggest different ecology relevance
Q46575967Heterotrophic Proteobacteria in the vicinity of diffuse hydrothermal venting
Q43361572Hexavalent chromium bioreduction and chemical precipitation of sulphate as a treatment of site-specific fly ash leachates
Q47721323High Diversity of Bacterial Communities in Developmental Stages of Bactrocera carambolae (Insecta: Tephritidae) Revealed by Illumina MiSeq Sequencing of 16S rRNA Gene
Q57070086High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany)
Q35880027High occurrence of Pacearchaeota and Woesearchaeota (Archaea superphylum DPANN) in the surface waters of oligotrophic high-altitude lakes
Q51147628High planktonic diversity in mountain lakes contains similar contributions of autotrophic, heterotrophic and parasitic eukaryotic life forms.
Q30854778High resolution profiling of coral-associated bacterial communities using full-length 16S rRNA sequence data from PacBio SMRT sequencing system.
Q88599555High-Fat Diet Consumption Induces Microbiota Dysbiosis and Intestinal Inflammation in Zebrafish
Q90721331High-Throughput 16S rRNA Sequencing to Assess Potentially Active Bacteria and Foodborne Pathogens: A Case Example in Ready-to-Eat Food
Q61449846High-Throughput Sequence Analyses of Bacterial Communities and Multi-Mycotoxin Profiling During Processing of Different Formulations of , a Traditional Fermented Beverage
Q51146118High-Throughput Sequencing Analysis of the Actinobacterial Spatial Diversity in Moonmilk Deposits.
Q46246384High-resolution bacterial 16S rRNA gene profile meta-analysis and biofilm status reveal common colorectal cancer consortia.
Q38952215High-resolution sequencing reveals unexplored archaeal diversity in freshwater wetland soils
Q91584398High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution
Q57793336High-throughput identification and diagnostics of pathogens and pests: overview and practical recommendations
Q92316167High-throughput sequence analysis of bacterial communities in commercial biofertiliser products marketed in South Africa: an independent snapshot quality assessment
Q67317996High-throughput sequencing approach in analysis of microbial communities colonizing natural gas pipelines.
Q100430124High-throughput sequencing provides insights into oral microbiota dysbiosis in association with inflammatory bowel disease
Q92239072Highly Diverse Aquatic Microbial Communities Separated by Permafrost in Greenland Show Distinct Features According to Environmental Niches
Q60310575Highly competitive fungi manipulate bacterial communities in decomposing beech wood (Fagus sylvatica)
Q41032591Highly efficient methane generation from untreated microalgae biomass
Q64965039Hindgut microbiota in laboratory-reared and wild Triatoma infestans.
Q51144178Holobionts and ecological speciation: the intestinal microbiota of lake whitefish species pairs.
Q46311563Host Genotype and Nitrogen Form Shape the Root Microbiome of Pinus radiata.
Q47736733Host Specificity for Bacterial, Archaeal and Fungal Communities Determined for High- and Low-Microbial Abundance Sponge Species in Two Genera
Q46288134Host effects on microbiota community assembly
Q57472221Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows
Q93081128Host-Associated Bacterial Succession during the Early Embryonic Stages and First Feeding in Farmed Gilthead Sea Bream (Sparus aurata)
Q97418191How being synanthropic affects the gut bacteriome and mycobiome: comparison of two mouse species with contrasting ecologies
Q55405533How, When, and Where Relic DNA Affects Microbial Diversity.
Q40243250HuR Small-Molecule Inhibitor Elicits Differential Effects in Adenomatosis Polyposis and Colorectal Carcinogenesis.
Q101051183Human milk microbiota in sub-acute lactational mastitis induces inflammation and undergoes changes in composition, diversity and load
Q89597415Hydrocarbon Removal by Two Differently Developed Microbial Inoculants and Comparing Their Actions with Biostimulation Treatment
Q55624850Hydrothermal chimneys host habitat-specific microbial communities: analogues for studying the possible impact of mining seafloor massive sulfide deposits.
Q93116486Hypergravity disrupts murine intestinal microbiota
Q46246786Hypoxia and inactivity related physiological changes precede or take place in absence of significant rearrangements in bacterial community structure: The PlanHab randomized trial pilot study
Q30838232Hypoxia causes preservation of labile organic matter and changes seafloor microbial community composition (Black Sea)
Q57037801Identification and characterization of in trombiculid chigger mites collected from wild rodents in Kenya
Q46517413Identification of microbes from the surfaces of food-processing lines based on the flow cytometric evaluation of cellular metabolic activity combined with cell sorting.
Q46263809Identification of universal gut microbial biomarkers of common human intestinal diseases by meta-analysis
Q37625381Identity, Abundance, and Reactivation Kinetics of Thermophilic Fermentative Endospores in Cold Marine Sediment and Seawater
Q33629736Illumina MiSeq 16S amplicon sequence analysis of bovine respiratory disease associated bacteria in lung and mediastinal lymph node tissue
Q52327655Illumina sequencing and assessment of new cost-efficient protocol for metagenomic-DNA extraction from environmental water samples.
Q90929755Illumina-based Analysis of Endophytic Bacterial Diversity of four Allium species
Q57476539Immune-suppression by OsHV-1 viral infection causes fatal bacteraemia in Pacific oysters
Q36864727Impact of Dietary Lipids on Colonic Function and Microbiota: An Experimental Approach Involving Orlistat-Induced Fat Malabsorption in Human Volunteers.
Q36083001Impact of Helminth Infections and Nutritional Constraints on the Small Intestine Microbiota
Q64102315Impact of Preservation Method and 16S rRNA Hypervariable Region on Gut Microbiota Profiling
Q60957049Impact of Rearing Conditions on the Ambrosia Beetle's Microbiome
Q47242246Impact of SRT on the performance of MBRs for the treatment of high strength landfill leachate
Q28596947Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition
Q35013180Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches
Q47868126Impact of dietary induced precocious gut maturation on cecal microbiota and its relation to the blood-brain barrier during the postnatal period in rats.
Q90223562Impact of hypoxia on gene expression patterns by the human pathogen, Vibrio vulnificus, and bacterial community composition in a North Carolina estuary
Q60912166Impact of inter- and intra-individual variation, sample storage and sampling fraction on human stool microbial community profiles
Q50016294Impact of oxytetracycline and bacterial bioaugmentation on the efficiency and microbial community structure of a pesticide-degrading biomixture.
Q96135720Impact of pemetrexed chemotherapy on the gut microbiota and intestinal inflammation of patient-lung-derived tumor xenograft (PDX) mouse models
Q36339858Impact of probiotic Saccharomyces boulardii on the gut microbiome composition in HIV-treated patients: A double-blind, randomised, placebo-controlled trial
Q51797796Impact of the Mk VI SkinSuit on skin microbiota of terrestrial volunteers and an International Space Station-bound astronaut.
Q92890852Impact of the early-life skin microbiota on the development of canine atopic dermatitis in a high-risk breed birth cohort
Q59523196Impact of the electron donor on in situ microbial nitrate reduction in Opalinus Clay: results from the Mont Terri rock laboratory (Switzerland)
Q93163316Impacts of Saharan Dust Intrusions on Bacterial Communities of the Low Troposphere
Q37703094Impacts of cerium oxide nanoparticles on bacterial community in activated sludge
Q37718639Impacts of chemical gradients on microbial community structure.
Q47686961Implementation of an algorithm for selection of antimicrobial therapy for diarrhoeic calves: Impact on antimicrobial treatment rates, health and faecal microbiota
Q99617610Implications of gut microbiome on coronary artery disease
Q37844039Importance of amoebae as a tool to isolate amoeba-resisting microorganisms and for their ecology and evolution: the Chlamydia paradigm
Q93382048Importance of gut microbiota in obesity
Q35257520Improved group-specific primers based on the full SILVA 16S rRNA gene reference database
Q31092987Improved metagenome assemblies and taxonomic binning using long-read circular consensus sequence data
Q64064634Improved taxonomic assignment of rumen bacterial 16S rRNA sequences using a revised SILVA taxonomic framework
Q58795576Improvements in Bacterial Primers to Enhance Selective SSU rRNA Gene Amplification of Plant-associated Bacteria by Applying the LNA Oligonucleotide-PCR Clamping Technique
Q52684674Improving saliva shotgun metagenomics by chemical host DNA depletion.
Q89249407Improving the standards for gut microbiome analysis of fecal samples: insights from the field biology of Japanese macaques on Yakushima Island
Q95661210In vitro human colonic microbiota utilises D-β-hydroxybutyrate to increase butyrogenesis
Q64116890In-feed resin acids reduce matrix metalloproteinase activity in the ileal mucosa of healthy broilers without inducing major effects on the gut microbiota
Q47154055Increased Biosynthetic Gene Dosage in a Genome-Reduced Defensive Bacterial Symbiont
Q58001179Increased Pancreatic Protease Activity in Response to Antibiotics Impairs Gut Barrier and Triggers Colitis
Q90149573Increased abundance of proteobacteria in aggressive Crohn's disease seven years after diagnosis
Q90402419Increasing the economic value of lignocellulosic stillage through medium-chain fatty acid production
Q36255216Independent Effects of a Herbivore's Bacterial Symbionts on Its Performance and Induced Plant Defences
Q41368752Independent Shifts of Abundant and Rare Bacterial Populations across East Antarctica Glacial Foreland
Q48340210Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing
Q40119566Induction of β-Lactamase Activity and Decreased β-Lactam Susceptibility by CO2 in Clinical Bacterial Isolates
Q94471957Infection with the sheep gastrointestinal nematode Teladorsagia circumcincta increases luminal pathobionts
Q40053688Infections by human gastrointestinal helminths are associated with changes in faecal microbiota diversity and composition.
Q41034737Infective endocarditis: does a new 16S rDNA set of primers improve the microbiological diagnosis?
Q92881710Inflammatory Biomarkers, Microbiome, Depression, and Executive Dysfunction in Alcohol Users
Q98394640Influence of 16S rRNA target region on the outcome of microbiome studies in soil and saliva samples
Q92174029Influence of 16S rRNA variable region on perceived diversity of marine microbial communities of the Northern North Atlantic
Q42225773Influence of Chlorination and Choice of Materials on Fouling in Cooling Water System under Brackish Seawater Conditions.
Q34106973Influence of DNA extraction method, 16S rRNA targeted hypervariable regions, and sample origin on microbial diversity detected by 454 pyrosequencing in marine chemosynthetic ecosystems.
Q64997256Influence of a Serratia marcescens outbreak on the gut microbiota establishment process in low-weight preterm neonates.
Q54257322Influence of fecal collection conditions and 16S rRNA gene sequencing at two centers on human gut microbiota analysis.
Q93270109Influence of oil, dispersant, and pressure on microbial communities from the Gulf of Mexico
Q92317833Influence of operation mode and wastewater strength on aerobic granulation at pilot scale: Startup period, granular sludge characteristics, and effluent quality
Q47658309Influence of resistance breeding in common bean on rhizosphere microbiome composition and function
Q89517054Influence of sulfonated and diet-derived human milk oligosaccharides on the infant microbiome and immune markers
Q64097457Influence of the Intestinal Microbiota on Colonization Resistance to and the Shedding Pattern of Naturally Exposed Pigs
Q55468355Influence of the Potential Carbon Sources for Field Denitrification Beds on Their Microbial Diversity and the Fate of Carbon and Nitrate.
Q96348450Influence of the long-term use of oral hygiene products containing stannous ions on the salivary microbiome - a randomized controlled trial
Q35972949Influence of zinc nanoparticles on survival of worms Eisenia fetida and taxonomic diversity of the gut microflora
Q92921919Insight Into the Microbial Co-occurrence and Diversity of 73 Grapevine (Vitis vinifera) Crown Galls Collected Across the Northern Hemisphere
Q42700509Insights into Microalga and Bacteria Interactions of Selected Phycosphere Biofilms Using Metagenomic, Transcriptomic, and Proteomic Approaches
Q90537328Insights into microbial community structure and diversity in oil palm waste compost
Q55333727Insights into the skin microbiome dynamics of leprosy patients during multi-drug therapy and in healthy individuals from Brazil.
Q55191835Insights into the variability of microbial community composition and micropollutant degradation in diverse biological wastewater treatment systems
Q89931327Instruction of microbiome taxonomic profiling based on 16S rRNA sequencing
Q98784819Integrated microbiota and metabolite profiles link Crohn's disease to sulfur metabolism
Q92433889Integrative description of bisexual Paramacrobiotus experimentalis sp. nov. (Macrobiotidae) from republic of Madagascar (Africa) with microbiome analysis
Q90457261Integrative isotopic and molecular approach for the diagnosis and implementation of an efficient in-situ enhanced biological reductive dechlorination of chlorinated ethenes
Q96127231Integrative omics analysis of the termite gut system adaptation to Miscanthus diet identifies lignocellulose degradation enzymes
Q39324400Integrity of the Human Faecal Microbiota following Long-Term Sample Storage
Q36217745Intense Exercise and Aerobic Conditioning Associated with Chromium or L-Carnitine Supplementation Modified the Fecal Microbiota of Fillies
Q43356727Intensified nitrate and phosphorus removal in an electrolysis -integrated horizontal subsurface-flow constructed wetland
Q35691374Inter-comparison of the potentially active prokaryotic communities in the halocline sediments of Mediterranean deep-sea hypersaline basins
Q46349596Inter-individual differences determine the outcome of wheat bran colonization by the human gut microbiome
Q59698082Inter-individual variability in copepod microbiomes reveals bacterial networks linked to host physiology
Q51150768Interactions among plants, bacteria, and fungi reduce extracellular enzyme activities under long-term N fertilization.
Q64075438Interleukin-33 Promotes REG3γ Expression in Intestinal Epithelial Cells and Regulates Gut Microbiota
Q57482254Intermittent fasting for microbes: how discontinuous feeding increases functional stability in anaerobic digestion
Q31076803International interlaboratory study comparing single organism 16S rRNA gene sequencing data: Beyond consensus sequence comparisons
Q57171498Interpopulation Variation in the Atlantic Salmon Microbiome Reflects Environmental and Genetic Diversity
Q30835994Interpreting 16S metagenomic data without clustering to achieve sub-OTU resolution
Q60782006Interrogating the microbiome: experimental and computational considerations in support of study reproducibility
Q56525706Intestinal Dysbiosis in Autoimmune Diabetes Is Correlated With Poor Glycemic Control and Increased Interleukin-6: A Pilot Study
Q97526897Intestinal Microbiota and Immune Modulation in Zebrafish by Fucoidan From Okinawa Mozuku (Cladosiphon okamuranus)
Q35904758Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children
Q88463083Intestinal microbiome of broiler chickens after use of nanoparticles and metal salts
Q27310097Intestinal microbiota composition of interleukin-10 deficient C57BL/6J mice and susceptibility to Helicobacter hepaticus-induced colitis
Q34523299Intra- and intergenomic variation of ribosomal RNA operons in concurrent Alteromonas macleodii strains
Q99608306Invention of Artificial Rice Field Soil: A Tool to Study the Effect of Soil Components on the Activity and Community of Microorganisms Involved in Anaerobic Organic Matter Decomposition
Q104473914Investigating seafood substitution problems and consequences in Taiwan using molecular barcoding and deep microbiome profiling
Q58758984Investigation of Detection Limits and the Influence of DNA Extraction and Primer Choice on the Observed Microbial Communities in Drinking Water Samples Using 16S rRNA Gene Amplicon Sequencing
Q36060447Investigation of bacterial and archaeal communities: novel protocols using modern sequencing by Illumina MiSeq and traditional DGGE-cloning.
Q46247370Investigation of different nitrogen reduction routes and their key microbial players in wood chip-driven denitrification beds.
Q34615674Investigation of the bacterial retting community of kenaf (Hibiscus cannabinus) under different conditions using next-generation semiconductor sequencing
Q51741191Investigations on the interplays between Schistosoma mansoni, praziquantel and the gut microbiome.
Q98177633Isolation and Characterization in a Soil Conditioned With Foaming Agents of a Bacterial Consortium Able to Degrade Sodium Lauryl Ether Sulfate
Q44073048Isolation and Characterization of Pseudomonas spp. Strains That Efficiently Decompose Sodium Dodecyl Sulfate
Q99551887Isolation and characterization of a novel Sphingobium yanoikuyae strain variant that uses biohazardous saturated hydrocarbons and aromatic compounds as sole carbon sources
Q98779056Isolation and characterization of a novel bacterial strain from a Tris-Acetate-Phosphate agar medium plate of the green micro-alga Chlamydomonas reinhardtii that can utilize common environmental pollutants as a carbon source
Q89769088Isolation and characterization of vaginal Lactobacillus spp. in dromedary camels (Camelus dromedarius): in vitro evaluation of probiotic potential of selected isolates
Q47552897Isolation and identification of a cellulolytic Enterobacter from rumen of Aceh cattle
Q46306672Isotopic effects of PCE induced by organohalide-respiring bacteria
Q90324441Joining Illumina paired-end reads for classifying phylogenetic marker sequences
Q43028342Kinetics of methane production and biodegradation of linear alkylbenzene sulfonate from laundry wastewater
Q55664133Lab to Field Assessment of the Ecotoxicological Impact of Chlorpyrifos, Isoproturon, or Tebuconazole on the Diversity and Composition of the Soil Bacterial Community.
Q64086122Lack of Small Intestinal Dysbiosis Following Long-Term Selective Inhibition of Cyclooxygenase-2 by Rofecoxib in the Rat
Q92343938Lactobacillus reuteri V3401 Reduces Inflammatory Biomarkers and Modifies the Gastrointestinal Microbiome in Adults with Metabolic Syndrome: The PROSIR Study
Q37724016Land-use types and soil chemical properties influence soil microbial communities in the semiarid Loess Plateau region in China
Q36090122Latitude in sample handling and storage for infant faecal microbiota studies: the elephant in the room?
Q64089100Less biomass and intracellular glutamate in anodic biofilms lead to efficient electricity generation by microbial fuel cells
Q35858563Levan Enhances Associated Growth of Bacteroides, Escherichia, Streptococcus and Faecalibacterium in Fecal Microbiota
Q28553182Limited Bacterial Diversity within a Treatment Plant Receiving Antibiotic-Containing Waste from Bulk Drug Production
Q36849695Lingonberries alter the gut microbiota and prevent low-grade inflammation in high-fat diet fed mice
Q46594047Lingonberries reduce atherosclerosis in Apoe(-/-) mice in association with altered gut microbiota composition and improved lipid profile
Q47826509Links between seawater flooding, soil ammonia oxidiser communities and their response to changes in salinity.
Q38661293Long-Term Rock Phosphate Fertilization Impacts the Microbial Communities of Maize Rhizosphere
Q50332850Long-Term Warming Shifts the Composition of Bacterial Communities in the Phyllosphere of Galium album in a Permanent Grassland Field-Experiment.
Q36021938Long-term ferrocyanide application via deicing salts promotes the establishment of Actinomycetales assimilating ferrocyanide-derived carbon in soil
Q92151787Long-term microbial community dynamics at two full-scale biotrickling filters treating pig house exhaust air
Q40252810Longitudinal Analysis of the Intestinal Microbiota in Liver Transplantation
Q64121707Longitudinal development of the airway microbiota in infants with cystic fibrosis
Q33883909Longitudinal profiling reveals a persistent intestinal dysbiosis triggered by conventional anti-tuberculosis therapy.
Q100428084Loss of bacterial diversity in the sinuses is associated with lower smell discrimination scores
Q48262966Low amounts of dietary fibre increase in vitro production of short-chain fatty acids without changing human colonic microbiota structure.
Q55267179Low bacterial community diversity in two introduced aphid pests revealed with 16S rRNA amplicon sequencing.
Q91878943Low-diversity bacterial microbiota in Southern Ocean representatives of lanternfish genera Electrona, Protomyctophum and Gymnoscopelus (family Myctophidae)
Q99629099Low-protein/high-carbohydrate diet induces AMPK-dependent canonical and non-canonical thermogenesis in subcutaneous adipose tissue
Q36325664MIPE: A metagenome-based community structure explorer and SSU primer evaluation tool
Q47808847Macrophage depletion using clodronate liposomes decreases tumorigenesis and alters gut microbiota in the AOM/DSS mouse model of colon cancer
Q64056196Maize synthesized benzoxazinoids affect the host associated microbiome
Q62651387Man-made microbial resistances in built environments
Q90282265Manipulation of the Gut Microbiome Alters Acetaminophen Biodisposition in Mice
Q54212494Mapping and comparing bacterial microbiota in the sinonasal cavity of healthy, allergic rhinitis, and chronic rhinosinusitis subjects.
Q90096944Mapping the Segmental Microbiomes in the Human Small Bowel in Comparison with Stool: A REIMAGINE Study
Q61805652Mapping the Surface Microbiome and Metabolome of Brown Seaweed Fucus vesiculosus by Amplicon Sequencing, Integrated Metabolomics and Imaging Techniques
Q92967172Mapping the bacterial ecology on the phyllosphere of dry and post soaked grass hay for horses
Q64118892Marine Deep Biosphere Microbial Communities Assemble in Near-Surface Sediments in Aarhus Bay
Q90431771Marine cyanolichens from different littoral zones are associated with distinct bacterial communities
Q88800904Marked Succession of Cyanobacterial Communities Following Glacier Retreat in the High Arctic
Q90623902Mastiha (Pistacia lentiscus) Improves Gut Microbiota Diversity, Hepatic Steatosis, and Disease Activity in a Biopsy-Confirmed Mouse Model of Advanced Non-Alcoholic Steatohepatitis and Fibrosis
Q94545289Meal Regularity Plays a Role in Shaping the Saliva Microbiota
Q58021080Measures of reproducibility in sampling and laboratory processing methods in high-throughput microbiome analysis
Q35735614Membrane biofilm development improves COD removal in anaerobic membrane bioreactor wastewater treatment
Q33723992Meta-analysis To Define a Core Microbiota in the Swine Gut.
Q39357553Metabarcoding and metabolome analyses of copepod grazing reveal feeding preference and linkage to metabolite classes in dynamic microbial plankton communities
Q33707449Metabarcoding monitoring analysis: the pros and cons of using co-extracted environmental DNA and RNA data to assess offshore oil production impacts on benthic communities
Q35289939Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies.
Q59939029Metabolic Capability and Phylogenetic Diversity of Mono Lake during a Bloom of the Eukaryotic Phototroph Picocystis sp. Strain ML
Q37028146Metabolic Capability of a Predominant Halanaerobium sp. in Hydraulically Fractured Gas Wells and Its Implication in Pipeline Corrosion
Q64103374Metabolic potential of uncultured bacteria and archaea associated with petroleum seepage in deep-sea sediments
Q90425831Metabolome and microbiome profiling of a stress-sensitive rat model of gut-brain axis dysfunction
Q28817867Metabolomic and Metagenomic Analysis of Two Crude Oil Production Pipelines Experiencing Differential Rates of Corrosion
Q57471398Metagenome Analysis as a Tool to Study Bacterial Infection Associated with Acute Surgical Abdomen
Q35152247Metagenome of a microbial community inhabiting a metal-rich tropical stream sediment
Q28662044Metagenome survey of a multispecies and alga-associated biofilm revealed key elements of bacterial-algal interactions in photobioreactors
Q94554516Metagenomic 16S rDNA amplicon data on bacterial diversity profiling and its predicted metabolic functions of varillales in Allpahuayo-Mishana National Reserve
Q37833997Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States
Q58711688Metagenomic Approaches for Understanding New Concepts in Microbial Science
Q35939986Metagenomic Characterisation of the Viral Community of Lough Neagh, the Largest Freshwater Lake in Ireland.
Q98465459Metagenomic Insights Into the Diversity of Halophilic Microorganisms Indigenous to the Karak Salt Mine, Pakistan
Q99238204Metagenomic Profiling and Microbial Metabolic Potential of Perdido Fold Belt (NW) and Campeche Knolls (SE) in the Gulf of Mexico
Q64089717Metagenomic analysis of isolation methods of a targeted microbe, Campylobacter jejuni, from chicken feces with high microbial contamination
Q66678814Metagenomic analysis of the effects of toll-like receptors on bacterial infection in the peritoneal cavity following cecum ligation and puncture in mice
Q38936680Metagenomic applications in environmental monitoring and bioremediation.
Q39423659Metagenomic insights into effects of spent engine oil perturbation on the microbial community composition and function in a tropical agricultural soil.
Q46297431Metagenomic insights into zooplankton-associated bacterial communities
Q36950250Metagenomic sequencing reveals the relationship between microbiota composition and quality of Chinese Rice Wine
Q35779146Metagenomics for the development of new biocatalysts to advance lignocellulose saccharification for bioeconomic development
Q36332990Metagenomics study of endophytic bacteria in Aloe vera using next-generation technology
Q46403610Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
Q46242073Metagenomics-guided analysis of microbial chemolithoautotrophic phosphite oxidation yields evidence of a seventh natural CO2 fixation pathway
Q30953199Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies
Q92602737Metataxonomic analyses reveal differences in aquifer bacterial community as a function of creosote contamination and its potential for contaminant remediation
Q36773761Metataxonomic and Metagenomic Approaches vs. Culture-Based Techniques for Clinical Pathology
Q33783256Metataxonomic profiling and prediction of functional behaviour of wheat straw degrading microbial consortia
Q36287063Metataxonomics reveal vultures as a reservoir for Clostridium perfringens.
Q91666256Methane-fuelled biofilms predominantly composed of methanotrophic ANME-1 in Arctic gas hydrate-related sediments
Q48343059Methanogenic and Sulfate-Reducing Activities in a Hypersaline Microbial Mat and Associated Microbial Diversity.
Q33849162Method for preparing DNA from feces in guanidine thiocyanate solution affects 16S rRNA-based profiling of human microbiota diversity.
Q54249582Methodology challenges in studying human gut microbiota - effects of collection, storage, DNA extraction and next generation sequencing technologies.
Q57550357Microbes influence the biogeochemical and optical properties of maritime Antarctic snow
Q57073747Microbial Communities Associated With Indigo Fermentation That Thrive in Anaerobic Alkaline Environments
Q92239111Microbial Communities in a Flow-Through Fish Farm for Lumpfish (Cyclopterus lumpus L.) During Healthy Rearing Conditions
Q99711485Microbial Communities of the Shallow-Water Hydrothermal Vent Near Naples, Italy, and Chemosynthetic Symbionts Associated With a Free-Living Marine Nematode
Q39143579Microbial Community Analysis of Colored Snow from an Alpine Snowfield in Northern Japan Reveals the Prevalence of Betaproteobacteria with Snow Algae.
Q40422560Microbial Community Analysis with Ribosomal Gene Fragments from Shotgun Metagenomes
Q90295774Microbial Community Composition Reveals Spatial Variation and Distinctive Core Microbiome of the Weaver Ant Oecophylla smaragdina in Malaysia
Q88886828Microbial Community Composition and Putative Biogeochemical Functions in the Sediment and Water of Tropical Granite Quarry Lakes
Q39373960Microbial Community Dynamics and Response to Plant Growth-Promoting Microorganisms in the Rhizosphere of Four Common Food Crops Cultivated in Hydroponics.
Q58580506Microbial Community Dynamics in Mother's Milk and Infant's Mouth and Gut in Moderately Preterm Infants
Q28553104Microbial Community Evolution Is Significantly Impacted by the Use of Calcium Isosaccharinic Acid as an Analogue for the Products of Alkaline Cellulose Degradation
Q55715527Microbial Community Shifts in Response to Acid Mine Drainage Pollution Within a Natural Wetland Ecosystem.
Q41785888Microbial Community Structure and Functions in Ethanol-Fed Sulfate Removal Bioreactors for Treatment of Mine Water
Q90383573Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing
Q64063266Microbial Diversity and Connectivity in Deep-Sea Sediments of the South Atlantic Polar Front
Q53685301Microbial Diversity and Toxin Risk in Tropical Freshwater Reservoirs of Cape Verde.
Q54939387Microbial Diversity in Commercial Bee Pollen from Europe, Chile, and Mexico, Based on 16S rRNA Gene Amplicon Metagenome Sequencing.
Q64928349Microbial Population Changes in Decaying Ascophyllum nodosum Result in Macroalgal-Polysaccharide-Degrading Bacteria with Potential Applicability in Enzyme-Assisted Extraction Technologies.
Q60931257Microbial and inflammatory-based salivary biomarkers of head and neck squamous cell carcinoma
Q61797632Microbial basis of Fusarium wilt suppression by Allium cultivation
Q42192604Microbial changes linked to the accelerated degradation of the herbicide atrazine in a range of temperate soils
Q41028858Microbial communities associated with the anthropogenic, highly alkaline environment of a saline soda lime, Poland.
Q100525994Microbial communities associated with the camel tick, Hyalomma dromedarii: 16S rRNA gene-based analysis
Q91033395Microbial communities controlling methane and nutrient cycling in leach field soils
Q40075845Microbial communities in the reef water at Kham Island, lower Gulf of Thailand.
Q36307164Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data
Q90342115Microbial communities of the Mediterranean rocky shore: ecology and biotechnological potential of the sea-land transition
Q90548209Microbial community composition and diversity in rice straw digestion bioreactors with and without dairy manure
Q35514904Microbial community composition and ultrastructure of granules from a full-scale anammox reactor.
Q40276485Microbial community composition is related to soil biological and chemical properties and bacterial wilt outbreak
Q90137608Microbial community dynamics during aerobic granulation in a sequencing batch reactor (SBR)
Q35965046Microbial community dynamics in replicate anaerobic digesters exposed sequentially to increasing organic loading rate, acidosis, and process recovery.
Q47720976Microbial community of a gasworks aquifer and identification of nitrate-reducing Azoarcus and Georgfuchsia as key players in BTEX degradation.
Q31148132Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics
Q57472300Microbial community structure and functional potential of lava-formed Gotjawal soils in Jeju, Korea
Q92768657Microbial composition of Kombucha determined using amplicon sequencing and shotgun metagenomics
Q55411501Microbial diversity and community composition of caecal microbiota in commercial and indigenous Indian chickens determined using 16s rDNA amplicon sequencing.
Q34708519Microbial diversity and community structure across environmental gradients in Bransfield Strait, Western Antarctic Peninsula
Q42840109Microbial diversity and methanogenic activity of Antrim Shale formation waters from recently fractured wells
Q91917609Microbial diversity and mineral composition of weathered serpentine rock of the Khalilovsky massif
Q38946880Microbial diversity of a full-scale UASB reactor applied to poultry slaughterhouse wastewater treatment: integration of 16S rRNA gene amplicon and shotgun metagenomic sequencing.
Q88227713Microbial diversity of thermophiles with biomass deconstruction potential in a foliage-rich hot spring
Q41109097Microbial ecology of watery kimchi
Q38626273Microbial ecology-based engineering of Microbial Electrochemical Technologies.
Q43359822Microbial fouling and corrosion of carbon steel in deep anoxic alkaline groundwater
Q33817486Microbial inhibitors of the fungus Pseudogymnoascus destructans, the causal agent of white-nose syndrome in bats
Q99207687Microbial interactions in the mosquito gut determine Serratia colonization and blood-feeding propensity
Q46250521Microbial life on a sand grain: from bulk sediment to single grains
Q44484167Microbial lipids reveal carbon assimilation patterns on hydrothermal sulfide chimneys
Q38659105Microbial planktonic communities in the Red Sea: high levels of spatial and temporal variability shaped by nutrient availability and turbulence
Q35910399Microbial profiles at baseline and not the use of antibiotics determine the clinical outcome of the treatment of chronic periodontitis
Q33639321Microbial profiles of a drinking water resource based on different 16S rRNA V regions during a heavy cyanobacterial bloom in Lake Taihu, China.
Q91236011Microbial succession during wheat bran fermentation and colonisation by human faecal microbiota as a result of niche diversification
Q34541011Microbial sulfur transformations in sediments from Subglacial Lake Whillans
Q37628872Microbiological Contamination at Workplaces in a Combined Heat and Power (CHP) Station Processing Plant Biomass
Q89976124Microbiological and Immunological Markers in Milk and Infant Feces for Common Gastrointestinal Disorders: A Pilot Study
Q47168127Microbiological and Physicochemical Changes in Natural Green Heat-Shocked Aloreña de Málaga Table Olives.
Q64068070Microbiology and Nitrogen Cycle in the Benthic Sediments of a Glacial Oligotrophic Deep Andean Lake as Analog of Ancient Martian Lake-Beds
Q90465797Microbiome Analyses for Toxicological Studies
Q57898135Microbiome Analysis Across a Natural Copper Gradient at a Proposed Northern Canadian Mine Site
Q58754104Microbiome Interaction Networks and Community Structure From Laboratory-Reared and Field-Collected , , and Mosquito Vectors
Q46494276Microbiome changes through ontogeny of a tick pathogen vector
Q58696351Microbiome composition within a sympatric species complex of intertidal isopods (Jaera albifrons)
Q58602838Microbiome shifts with onset and progression of Sea Star Wasting Disease revealed through time course sampling
Q90504773Microbiomes in the insectivorous bat species Mops condylurus rapidly converge in captivity
Q90345125Microbiota Composition and Evenness Predict Survival Rate of Oysters Confronted to Pacific Oyster Mortality Syndrome
Q58769235Microbiota dysbiosis and its pathophysiological significance in bowel obstruction
Q33821872Microbiota in anorexia nervosa: The triangle between bacterial species, metabolites and psychological tests
Q95319295Microbiota in vitro modulated with polyphenols shows decreased colonization resistance against Clostridioides difficile but can neutralize cytotoxicity
Q92642541Microbiota of human precolostrum and its potential role as a source of bacteria to the infant mouth
Q91904061Microbiota of the Oropharynx and Endoscope Compared to the Esophagus
Q91990093Microbiota profiling with long amplicons using Nanopore sequencing: full-length 16S rRNA gene and the 16S-ITS-23S of the  rrn operon
Q47218414Microbiota-based analysis reveals specific bacterial traits and a novel strategy for the diagnosis of infectious infertility.
Q93136262Microflora composition in the gastrointestinal tract in patients with Barrett's esophagus
Q89965223Milk Microbiota: What Are We Exactly Talking About?
Q34049867Minimization of chloroplast contamination in 16S rRNA gene pyrosequencing of insect herbivore bacterial communities
Q36153085Mining gut microbiome oligopeptides by functional metaproteome display
Q91868325Minor Effect of Antibiotic Pre-treatment on the Engraftment of Donor Microbiota in Fecal Transplantation in Mice
Q57196737Minor impacts of reduced pH on bacterial biofilms on settlement tiles along natural pH gradients at two CO2seeps in Papua New Guinea
Q38467123Mitigation of Biofilm Formation on Corrugated Cardboard Fresh Produce Packaging Surfaces Using a Novel Thiazolidinedione Derivative Integrated in Acrylic Emulsion Polymers
Q90024438Mixed mucosal-parenteral immunizations with the broadly conserved pathogenic Escherichia coli antigen SslE induce a robust mucosal and systemic immunity without affecting the murine intestinal microbiota
Q98177641Mobility of β-Lactam Resistance Under Bacterial Co-infection and Ampicillin Treatment in a Mouse Model
Q42706625Modified RNA-seq method for microbial community and diversity analysis using rRNA in different types of environmental samples
Q39357927Modified niche optima and breadths explain the historical contingency of bacterial community responses to eutrophication in coastal sediments.
Q34677228Modulation of gut microbiota dysbioses in type 2 diabetic patients by macrobiotic Ma-Pi 2 diet
Q59793654Modulation of intestinal microbiota, morphology and mucin composition by dietary insect meal inclusion in free-range chickens
Q90640979Modulatory Effect of Protein and Carotene Dietary Levels on Pig gut Microbiota
Q90699647Molecular Analysis of Selected Resistance Determinants in Diarrheal Fecal Samples Collected From Kolkata, India Reveals an Abundance of Resistance Genes and the Potential Role of the Microbiota in Its Dissemination
Q36055503Molecular Properties of Guar Gum and Pectin Modify Cecal Bile Acids, Microbiota, and Plasma Lipopolysaccharide-Binding Protein in Rats
Q64070006Molecular Techniques Complement Culture-Based Assessment of Bacteria Composition in Mixed Biofilms of Urinary Tract Catheter-Related Samples
Q35117356Molecular analysis of the microbiota in hard feces from healthy rabbits (Oryctolagus cuniculus) medicated with long term oral meloxicam
Q36505349Molecular diversity of bacteria in commercially available "Spirulina" food supplements
Q92982587Molecular microbial ecology of stable versus failing rice straw anaerobic digesters
Q91411114Molecular techniques and their limitations shape our view of the holobiont
Q41073410Monitoring the dynamics of syntrophic β-oxidizing bacteria during anaerobic degradation of oleic acid by quantitative PCR.
Q89528113Monitoring, assessment, and prediction of microbial shifts in coupled catalysis and biodegradation of 1,4-dioxane and co-contaminants
Q40614217Moraxella catarrhalis Might Be More Common than Expected in Acute Otitis Media in Young Finnish Children
Q42201137Morphotypes of virus-like particles in two hydrothermal vent fields on the East Scotia Ridge, Antarctica
Q40473353Mosquitoes host communities of bacteria that are essential for development but vary greatly between local habitats.
Q35867610Mucosal Barrier Depletion and Loss of Bacterial Diversity are Primary Abnormalities in Paediatric Ulcerative Colitis
Q36399403Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinIONTM portable nanopore sequencer.
Q28597587Multi-marker metabarcoding of coral skeletons reveals a rich microbiome and diverse evolutionary origins of endolithic algae
Q33640903Multi-omics approaches to disease
Q115463763Multi-omics profiling of Earth’s biomes reveals patterns of diversity and co-occurrence in microbial and metabolite composition across environments
Q93024058Multipartner Symbiosis across Biological Domains: Looking at the Eukaryotic Associations from a Microbial Perspective
Q49552744Multiple Acquisitions of Pathogen-Derived Francisella Endosymbionts in Soft Ticks.
Q60046924Multiple Strategies for Light-Harvesting, Photoprotection, and Carbon Flow in High Latitude Microbial Mats
Q28834525Municipal Solid Waste Landfills Harbor Distinct Microbiomes
Q67212780Mycobiome diversity: high-throughput sequencing and identification of fungi
Q35885109N2 Gas Flushing Alleviates the Loss of Bacterial Diversity and Inhibits Psychrotrophic Pseudomonas during the Cold Storage of Bovine Raw Milk
Q91788120Natural limestone discolouration triggered by microbial activity-a contribution
Q36605415New Insights into the Microbiota of the Svalbard Reindeer Rangifer tarandus platyrhynchus
Q48146041New barcoded primers for efficient retrieval of cercozoan sequences in high-throughput environmental diversity surveys, with emphasis on worldwide biological soil crusts
Q61443048New insights into culture negative endophthalmitis by unbiased next generation sequencing
Q90604257Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment
Q52365739Next generation sequencing for gut microbiome characterization in rainbow trout (Oncorhynchus mykiss) fed animal by-product meals as an alternative to fishmeal protein sources.
Q37717097Next-Generation Sequencing Combined with Specific PCR Assays To Determine the Bacterial 16S rRNA Gene Profiles of Middle Ear Fluid Collected from Children with Acute Otitis Media
Q92658634Next-generation sequencing analysis of bacterial flora in bovine protothecal mastitic milk and feces
Q92621212Next-generation sequencing for the detection of microorganisms present in human donor corneal preservation medium
Q90589408Niche-based assembly of bacterial consortia on the diatom Thalassiosira rotula is stable and reproducible
Q40490500Nitrifier-induced denitrification is an important source of soil nitrous oxide and can be inhibited by a nitrification inhibitor 3,4-dimethylpyrazole phosphate.
Q89714149Nitrogen removal as nitrous oxide for energy recovery: Increased process stability and high nitrous yields at short hydraulic residence times
Q35608317NoDe: a fast error-correction algorithm for pyrosequencing amplicon reads
Q37163306Non-absorbable apple procyanidins prevent obesity associated with gut microbial and metabolomic changes
Q94564598Non-invasive Assessment of Fecal Stress Biomarkers in Hunting Dogs During Exercise and at Rest
Q100416019Non-specific amplification of human DNA is a major challenge for 16S rRNA gene sequence analysis
Q57093512Nontuberculous mycobacteria in the environment of Hranice Abyss, the world's deepest flooded cave (Hranice karst, Czech Republic)
Q35510324Normalization of environmental metagenomic DNA enhances the discovery of under-represented microbial community members.
Q36258742Novel Primer Sets for Next Generation Sequencing-Based Analyses of Water Quality
Q57208516Novel Wolbachia strains in Anopheles malaria vectors from Sub-Saharan Africa
Q41327492Novel arsenic-transforming bacteria and the diversity of their arsenic-related genes and enzymes arising from arsenic-polluted freshwater sediment
Q91657920Novel copper-containing membrane monooxygenases (CuMMOs) encoded by alkane-utilizing Betaproteobacteria
Q90488271Novel facultative Methylocella strains are active methane consumers at terrestrial natural gas seeps
Q92157088Novel insights into plant-associated archaea and their functioning in arugula (Eruca sativa Mill.).
Q35718216Novel molecular markers for the detection of methanogens and phylogenetic analyses of methanogenic communities.
Q99584895Nutrient Capture from Aqueous Waste and Photocontrolled Fertilizer Delivery to Tomato Plants Using Fe(III)-Polysaccharide Hydrogels
Q38726875Nutrient Stoichiometry Shapes Microbial Community Structure in an Evaporitic Shallow Pond
Q46304624Nutrient and acetate amendment leads to acetoclastic methane production and microbial community change in a non-producing Australian coal well.
Q51149070Nutrient-Dependent Impact of Microbes on Drosophila suzukii Development.
Q33817022Nutritional Correlates of Human Oral Microbiome
Q90062165Nutritional Therapy Modulates Intestinal Microbiota and Reduces Serum Levels of Total and Free Indoxyl Sulfate and P-Cresyl Sulfate in Chronic Kidney Disease (Medika Study)
Q58797611Oil type and temperature dependent biodegradation dynamics - Combining chemical and microbial community data through multivariate analysis
Q92571890Oligosaccharides Modulate Rotavirus-Associated Dysbiosis and TLR Gene Expression in Neonatal Rats
Q64066247On resolving ambiguities in microbial community analysis of partial nitritation anammox reactors
Q91928883On-Site Analysis of Bacterial Communities of the Ultraoligotrophic South Pacific Gyre
Q36320795Opportunistic Sampling of Roadkill as an Entry Point to Accessing Natural Products Assembled by Bacteria Associated with Non-anthropoidal Mammalian Microbiomes.
Q35110563Optimal eukaryotic 18S and universal 16S/18S ribosomal RNA primers and their application in a study of symbiosis
Q36256376Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
Q37633687Optimization of DNA extraction for advancing coral microbiota investigations.
Q38597549Optimization of a metatranscriptomic approach to study the lignocellulolytic potential of the higher termite gut microbiome.
Q54112171Optimized genotyping method for identification of bacterial contaminants in pharmaceutical industry.
Q58795823Optimizing PCR primers targeting the bacterial 16S ribosomal RNA gene
Q89554883Oral and Gut Microbial Diversity and Immune Regulation in Patients with HIV on Antiretroviral Therapy
Q98238189Oral and vaginal microbiota in selected field mice of the genus Apodemus: a wild population study
Q90543060Oral biofilms exposure to chlorhexidine results in altered microbial composition and metabolic profile
Q89095173Oral microbiome development during childhood: an ecological succession influenced by postnatal factors and associated with tooth decay
Q36158407Oral supplementation of healthy adults with 2'-O-fucosyllactose and lacto-N-neotetraose is well tolerated and shifts the intestinal microbiota
Q46251417Organic Amendments in a Long-term Field Trial-Consequences for the Bulk Soil Bacterial Community as Revealed by Network Analysis
Q90280747Organic Soils Control Beetle Survival While Competitors Limit Aphid Population Growth
Q64252937Overall Dietary Quality Relates to Gut Microbiota Diversity and Abundance
Q59807799Oxidative stress in the oral cavity is driven by individual-specific bacterial communities
Q41870928Particle-Associated Differ from Free-Living Bacteria in Surface Waters of the Baltic Sea.
Q89220136Pathogen colonization of the gastrointestinal microbiome at intensive care unit admission and risk for subsequent death or infection
Q36152418Paucibacterial Microbiome and Resident DNA Virome of the Healthy Conjunctiva
Q36896837Performance of 16s rDNA Primer Pairs in the Study of Rhizosphere and Endosphere Bacterial Microbiomes in Metabarcoding Studies
Q33791192Performing Skin Microbiome Research: A Method to the Madness
Q39000729Permeability shapes bacterial communities in sublittoral surface sediments.
Q96302437Persistence of plastic debris and its colonization by bacterial communities after two decades on the abyssal seafloor
Q46458855Personal microbiomes and next-generation sequencing for laboratory-based education.
Q46500148Phylogenetic Analyses Support Validity of Genus Eodinium (Ciliophora, Entodiniomorphida, Ophryoscolecidae).
Q36681355Phylogenetic Diversity, Distribution, and Cophylogeny of Giant Bacteria (Epulopiscium) with their Surgeonfish Hosts in the Red Sea
Q50129748Phylogenetic clustering of small low nucleic acid-content bacteria across diverse freshwater ecosystems.
Q92026451Phylotypic Characterization of Mycobionts and Photobionts of Rock Tripe Lichen in East Antarctica
Q55031068Pig Farmers' Homes Harbor More Diverse Airborne Bacterial Communities Than Pig Stables or Suburban Homes.
Q36031725Piglet nasal microbiota at weaning may influence the development of Glässer's disease during the rearing period
Q92734890Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences
Q61882776Plankton community assessment in anthropogenic-impacted oligotrophic coastal regions
Q90401048Plant Identity Shaped Rhizospheric Microbial Communities More Strongly Than Bacterial Bioaugmentation in Petroleum Hydrocarbon-Polluted Sediments
Q56888044Poisoning with Soman, an Organophosphorus Nerve Agent, Alters Fecal Bacterial Biota and Urine Metabolites: a case for Novel Signatures for Asymptomatic Nerve Agent Exposure
Q36262229Population expansion and individual age affect endoparasite richness and diversity in a recolonising large carnivore population
Q36605367Postoperative Changes in Fecal Bacterial Communities and Fermentation Products in Obese Patients Undergoing Bilio-Intestinal Bypass
Q99635155Potential Associations Among Alteration of Salivary miRNAs, Saliva Microbiome Structure, and Cognitive Impairments in Autistic Children
Q34444192Potential for biogeochemical cycling of sulfur, iron and carbon within massive sulfide deposits below the seafloor
Q88585186Potential forensic biogeographic application of diatom colony consistency analysis employing pyrosequencing profiles of the 18S rDNA V7 region
Q37031988Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier
Q100633925Prebiotic effects of yeast mannan, which selectively promotes Bacteroides thetaiotaomicron and Bacteroides ovatus in a human colonic microbiota model
Q34796497Preliminary assessment of microbiome changes following blood-feeding and survivorship in the Amblyomma americanum nymph-to-adult transition using semiconductor sequencing
Q91951154Prenatal and postnatal determinants in shaping offspring's microbiome in the first 1000 days: study protocol and preliminary results at one month of life
Q89522508Preparation and characterization of site-specific dechlorinating microbial inocula capable of complete dechlorination enriched in anaerobic microcosms amended with clay mineral
Q98158742Presence of Acanthamoeba and diversified bacterial flora in poorly maintained contact lens cases
Q98157803Prevalence and abundance of selected genes conferring macrolide resistance genes in COPD patients during maintenance treatment with azithromycin
Q40614261Primer and platform effects on 16S rRNA tag sequencing
Q43019055Primer evaluation and adaption for cost-efficient SYBR Green-based qPCR and its applicability for specific quantification of methanogens
Q51148587Primer selection impacts specific population abundances but not community dynamics in a monthly time-series 16S rRNA gene amplicon analysis of coastal marine bacterioplankton.
Q43802287Pro-Inflammatory versus Immunomodulatory Effects of Silver Nanoparticles in the Lung: The Critical Role of Dose, Size and Surface Modification.
Q92442433Probiotic Supplementation in a Clostridium difficile-Infected Gastrointestinal Model Is Associated with Restoring Metabolic Function of Microbiota
Q54958970Probiotic supplementation and associated infant gut microbiome and health: a cautionary retrospective clinical comparison.
Q38755972Probiotic yogurt and acidified milk similarly reduce postprandial inflammation and both alter the gut microbiota of healthy, young men.
Q60303723Profiling mycobacterial communities in pulmonary nontuberculous mycobacterial disease
Q43169525Prokaryotes in Subsoil-Evidence for a Strong Spatial Separation of Different Phyla by Analysing Co-occurrence Networks.
Q46276367Prokaryotic community profiling of local algae wastewaters using advanced 16S rRNA gene sequencing
Q90136557Prolonged high-fat-diet feeding promotes non-alcoholic fatty liver disease and alters gut microbiota in mice
Q49908853Properties of bacterial communities attached to artificial substrates in a hypereutrophic urban river.
Q64971590Propionate-Producing Consortium Restores Antibiotic-Induced Dysbiosis in a Dynamic in vitro Model of the Human Intestinal Microbial Ecosystem.
Q41557420Protected sampling is preferable in bronchoscopic studies of the airway microbiome
Q55654769Proteomic and metagenomic insights into prehistoric Spanish Levantine Rock Art.
Q97522385Pseudomonas aeruginosa Biofilm Removal from Two Kinds of Granite Commonly Found in Catering Kitchen
Q36790624Quantification of the effects of ocean acidification on sediment microbial communities in the environment: the importance of ecosystem approaches
Q28828929Quantifying the biases in metagenome mining for realistic assessment of microbial ecology of naturally fermented foods
Q35212018RNA shotgun metagenomic sequencing of northern California (USA) mosquitoes uncovers viruses, bacteria, and fungi
Q38733126RNA-Based Amplicon Sequencing Reveals Microbiota Development during Ripening of Artisanal versus Industrial Lard d'Arnad
Q41817457RNA-Based Stable Isotope Probing Suggests Allobaculum spp. as Particularly Active Glucose Assimilators in a Complex Murine Microbiota Cultured In Vitro
Q92335235RORγt+ Treg to Th17 ratios correlate with susceptibility to Giardia infection
Q98237791Randomised, double-blind, placebo-controlled trial of oral probiotic Streptococcus salivarius M18 on head and neck cancer patients post-radiotherapy: a pilot study
Q88930460Rapid Microbial Community Changes During Initial Stages of Pine Litter Decomposition
Q90184120Rapid analysis of bacterial composition in prosthetic joint infection by 16S rRNA metagenomic sequencing
Q60303043Rapid increases in soil pH solubilise organic matter, dramatically increase denitrification potential and strongly stimulate microorganisms from the phylum
Q101476605Rapid pathogen detection by metagenomic next-generation sequencing of infected body fluids
Q36293175Raw meat based diet influences faecal microbiome and end products of fermentation in healthy dogs.
Q42315672Reactivation of Deep Subsurface Microbial Community in Response to Methane or Methanol Amendment.
Q21146690Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
Q58572857Reduced Chlorine in Drinking Water Distribution Systems Impacts Bacterial Biodiversity in Biofilms
Q58091840Reduced diversity of gut microbiota in two Aedes mosquitoes species in areas of recent invasion
Q37631109Reduction of Abeta amyloid pathology in APPPS1 transgenic mice in the absence of gut microbiota
Q40085659Regulation of life span by the gut microbiota in the short-lived African turquoise killifish
Q90105463Removal of microorganisms and antibiotic resistance genes from treated urban wastewater: A comparison between aluminium sulphate and tannin coagulants
Q46244021Removal of the cecum affects intestinal fermentation, enteric bacterial community structure, and acute colitis in mice.
Q89579251Repeated inoculation with fresh rumen fluid before or during weaning modulates the microbiota composition and co-occurrence of the rumen and colon of lambs
Q57025293Reproducibility and repeatability of six high-throughput 16S rDNA sequencing protocols for microbiota profiling
Q57025346Reproducibility and repeatability of six high-throughput 16S rDNA sequencing protocols for microbiota profiling
Q26797508Republished: Respiratory microbiota: addressing clinical questions, informing clinical practice
Q39306133Resilience of the prokaryotic microbial community of Acropora digitifera to elevated temperature
Q28818823Resilient microorganisms in dust samples of the International Space Station-survival of the adaptation specialists
Q64084680Resistance and Resilience of Sulfidogenic Communities in the Face of the Specific Inhibitor Perchlorate
Q52691303Resistance and resilience of small-scale recirculating aquaculture systems (RAS) with or without algae to pH perturbation.
Q50291508Respiratory Disease following Viral Lung Infection Alters the Murine Gut Microbiota.
Q89766941Respiratory Viral Infection Alters the Gut Microbiota by Inducing Inappetence
Q34818539Respiratory microbiota: addressing clinical questions, informing clinical practice
Q93008737Response and recovery of microbial communities subjected to oxidative and biological treatments of 1,4-dioxane and co-contaminants
Q36305682Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments
Q57020921Response of the anaerobic methanotroph ' Methanoperedens nitroreducens' to oxygen stress
Q36332787Response of the rhizosphere prokaryotic community of barley (Hordeum vulgare L.) to elevated atmospheric CO2 concentration in open-top chambers
Q90622340Responses of Rhizospheric Microbial Communities of Native and Alien Plant Species to Cuscuta Parasitism
Q98463819Responses of active soil microorganisms facing to a soil biostimulant input compared to plant legacy effects
Q48326250Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias.
Q36273975Rett Syndrome: A Focus on Gut Microbiota
Q92663651Revegetation on abandoned salt ponds relieves the seasonal fluctuation of soil microbiomes
Q91818410Review: The application of omics to rumen microbiota function
Q60949747Rhizosphere Microenvironments of Eight Common Deciduous Fruit Trees Were Shaped by Microbes in Northern China
Q35204209Rhizosphere heterogeneity shapes abundance and activity of sulfur-oxidizing bacteria in vegetated salt marsh sediments
Q38656634Rhizospheric Microbiome Profiling of Capsicum annuum L. Cultivated in Amended Soils by 16S and Internal Transcribed Spacer 2 rRNA Amplicon Metagenome Sequencing
Q92963674Robust Archaeal and Bacterial Communities Inhabit Shallow Subsurface Sediments of the Bonneville Salt Flats
Q37728695Robust, high-productivity phototrophic carbon capture at high pH and alkalinity using natural microbial communities
Q64245369Root-Associated Endophytic Bacterial Community Composition of from Four Representative Provinces in China
Q55328069Rumen Biohydrogenation and Microbial Community Changes Upon Early Life Supplementation of 22:6n-3 Enriched Microalgae to Goats.
Q92290451Rumen and Fecal Microbial Community Structure of Holstein and Jersey Dairy Cows as Affected by Breed, Diet, and Residual Feed Intake
Q60049125Rumen microbiome in dairy calves fed copper and grape-pomace dietary supplementations: Composition and predicted functional profile
Q64228252SELfies and CELLfies: Whole Genome Sequencing and Annotation of Five Antibiotic Resistant Bacteria Isolated from the Surfaces of Smartphones, An Inquiry Based Laboratory Exercise in a Genomics Undergraduate Course at the Rochester Institute of Techno
Q102152213Salivary microbiome composition changes after bariatric surgery
Q60930581Sample storage conditions induce post-collection biases in microbiome profiles
Q64056865Scalp bacterial shift in Alopecia areata
Q57204827Schistosoma mansoni infection is associated with quantitative and qualitative modifications of the mammalian intestinal microbiota
Q89820502Schistosomiasis Vector Snails and Their Microbiota Display a Phylosymbiosis Pattern
Q35844680Seasonal and spatial patterns of microbial diversity along a trophic gradient in the interconnected lakes of the Osterseen Lake District, Bavaria
Q93188952Seasonal dynamics of microbial diversity in the rhizosphere of Ulmus pumila L. var. sabulosa in a steppe desert area of Northern China
Q46373096Seasonal variation in the copepod gut microbiome in the subtropical North Atlantic Ocean.
Q42639689Seawater transfer alters the intestinal microbiota profiles of Atlantic salmon (Salmo salar L.).
Q42378260Sediment microbial taxonomic and functional diversity in a natural salinity gradient challenge Remane's "species minimum" concept
Q99346598Sediment-associated bacterial community and predictive functionalities are influenced by choice of 16S ribosomal RNA hypervariable region(s): An amplicon-based diversity study
Q59799075Selection of fast and slow growing bacteria from fecal microbiota using continuous culture with changing dilution rate
Q55512203Selection of validated hypervariable regions is crucial in 16S-based microbiota studies of the female genital tract.
Q90371192Selfish, sharing and scavenging bacteria in the Atlantic Ocean: a biogeographical study of bacterial substrate utilisation
Q46309117Sensitive community responses of microbiota to copper in sediment toxicity test
Q34519249Sensitivity and correlation of hypervariable regions in 16S rRNA genes in phylogenetic analysis
Q94663991Sex-dependent associations between addiction-related behaviors and the microbiome in outbred rats
Q61806027Shift in Bacterial Community Structure Drives Different Atrazine-Degrading Efficiencies
Q98177116Shifts in the microbiota associated with male mosquitoes (Aedes aegypti) exposed to an obligate gut fungal symbiont (Zancudomyces culisetae)
Q41094367Short-chain fatty acids and inulin, but not guar gum, prevent diet-induced obesity and insulin resistance through differential mechanisms in mice
Q57472713Showcasing the role of seawater in bacteria recruitment and microbiome stability in sponges
Q90162685Siboglinidae Tubes as an Additional Niche for Microbial Communities in the Gulf of Cádiz-A Microscopical Appraisal
Q37284962Significant loss of sensitivity and specificity in the taxonomic classification occurs when short 16S rRNA gene sequences are used
Q92096211Simultaneous detection and comprehensive analysis of HPV and microbiome status of a cervical liquid-based cytology sample using Nanopore MinION sequencing
Q64904396Single Core Genome Sequencing for Detection of both Borrelia burgdorferi Sensu Lato and Relapsing Fever Borrelia Species.
Q97653058Size resolved characteristics of urban and suburban bacterial bioaerosols in Japan as assessed by 16S rRNA amplicon sequencing
Q92993989Skin microbiome modulation induced by probiotic solutions
Q55284539Small tropical islands with dense human population: differences in water quality of near-shore waters are associated with distinct bacterial communities.
Q35839254So close, so different: geothermal flux shapes divergent soil microbial communities at neighbouring sites
Q104509600Social isolation alters behavior, the gut-immune-brain axis, and neurochemical circuits in male and female prairie voles
Q43030207Soda pans of the Pannonian steppe harbor unique bacterial communities adapted to multiple extreme conditions
Q46280266Sodium butyrate improved performance while modulating the cecal microbiota and regulating the expression of intestinal immune-related genes of broiler chickens
Q96576379Sodium butyrate inhibits high cholesterol-induced neuronal amyloidogenesis by modulating NRF2 stabilization-mediated ROS levels: involvement of NOX2 and SOD1
Q98465536Soil Fungal Communities Investigated by Metabarcoding Within Simulated Forensic Burial Contexts
Q91788150Soil bacterial communities of Sahara and Gibson deserts: Physiological and taxonomical characteristics
Q28535305Soil bacterial community shifts after chitin enrichment: an integrative metagenomic approach
Q103804033Soil bacterial community structures in relation to different oil palm management practices
Q98159239Soil microbial communities associated with giant sequoia: How does the world's largest tree affect some of the world's smallest organisms?
Q47557723Soil prokaryotic communities in Chernobyl waste disposal trench T22 are modulated by organic matter and radionuclide contamination.
Q100455082Soil-microorganism-mediated invasional meltdown in plants
Q64263821Source Environments of the Microbiome in Perennially Ice-Covered Lake Untersee, Antarctica
Q93133383Space Station conditions are selective but do not alter microbial characteristics relevant to human health
Q64118395Spatial Variability of Antarctic Surface Snow Bacterial Communities
Q92770641Spatial and temporal turnover of soil microbial communities is not linked to function in a primary tropical forest
Q46324114Spatiotemporal dynamics of the bacterial microbiota on lacustrine Cladophora glomerata (Chlorophyta).
Q57798629Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes
Q34511333Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer.
Q40124414Specific Signatures of the Gut Microbiota and Increased Levels of Butyrate in Children Treated with Fermented Cow's Milk Containing Heat-Killed Lactobacillus paracasei CBA L74.
Q60924611Specific recruitment of soil bacteria and fungi decomposers following a biostimulant application increased crop residues mineralization
Q90050529Sponges and Their Microbiomes Show Similar Community Metrics Across Impacted and Well-Preserved Reefs
Q35783391Stable Associations Masked by Temporal Variability in the Marine Copepod Microbiome
Q89571042Stable Isotope and Metagenomic Profiling of a Methanogenic Naphthalene-Degrading Enrichment Culture
Q89976824Standardization of Plant Microbiome Studies: Which Proportion of the Microbiota is Really Harvested?
Q90288169Stool sampling and DNA isolation kits affect DNA quality and bacterial composition following 16S rRNA gene sequencing using MiSeq Illumina platform
Q33612034Strategies and Methodologies for Developing Microbial Detoxification Systems to Mitigate Mycotoxins
Q46726960Stratification of Diversity and Activity of Methanogenic and Methanotrophic Microorganisms in a Nitrogen-Fertilized Italian Paddy Soil
Q35142841Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics.
Q89532054Structural and functional differentiation of bacterial communities in post-coal mining reclamation soils of South Africa: bioindicators of soil ecosystem restoration
Q50143214Structural and functional variability in root-associated bacterial microbiomes of Cd/Zn hyperaccumulator Sedum alfredii.
Q97595754Structure and co-occurrence patterns of bacterial communities associated with white faeces disease outbreaks in Pacific white-leg shrimp Penaeus vannamei aquaculture
Q35185946Structure and function of the bacterial root microbiota in wild and domesticated barley.
Q51146477Studying microbial functionality within the gut ecosystem by systems biology.
Q30392209Studying the microbiology of the indoor environment
Q38961009Succession and dynamics of Pristionchus nematodes and their microbiome during decomposition of Oryctes borbonicus on La Réunion Island
Q64960027Succession of embryonic and the intestinal bacterial communities of Atlantic salmon (Salmo salar) reveals stage-specific microbial signatures.
Q35923440Succession of lignocellulolytic bacterial consortia bred anaerobically from lake sediment
Q39557051Summer holidays as break-point in shaping a tannery sludge microbial community around a stable core microbiota.
Q40406129Sybr Green- and TaqMan-Based Quantitative PCR Approaches Allow Assessment of the Abundance and Relative Distribution of Frankia Clusters in Soils
Q35155204Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia
Q36084768Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies
Q47725450TREM-1 Inhibition Restores Impaired Autophagy Activity and Reduces Colitis in Mice
Q92163578Tailings microbial community profile and prediction of its functionality in basins of tungsten mine
Q46242290Tales from the tomb: the microbial ecology of exposed rock surfaces.
Q52689492Tapering Courses of Oral Vancomycin Induce Persistent Disruption of the Microbiota That Provide Colonization Resistance to Clostridium difficile and Vancomycin-Resistant Enterococci in Mice.
Q98465430Targeted Cell Sorting Combined With Single Cell Genomics Captures Low Abundant Microbial Dark Matter With Higher Sensitivity Than Metagenomics
Q90460075Targeted High-Throughput Sequencing Identifies Predominantly Fungal Pathogens in Patients with Clinically Infectious, Culture-Negative Endophthalmitis in South India
Q89633542Targeted-Release Organic Acids and Essential Oils Improve Performance and Digestive Function in Broilers Under a Necrotic Enteritis Challenge
Q33897850Taurine does not affect the composition, diversity, or metabolism of human colonic microbiota simulated in a single-batch fermentation system
Q57194466TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution
Q48130454Taxonomy of anaerobic digestion microbiome reveals biases associated with the applied high throughput sequencing strategies
Q41061698Temporal Microbial Community Dynamics in Microbial Electrolysis Cells - Influence of Acetate and Propionate Concentration
Q37625977Temporal Stability and the Effect of Transgenerational Transfer on Fecal Microbiota Structure in a Long Distance Migratory Bird
Q36071294Temporal and Spatial Variation of Soil Bacteria Richness, Composition, and Function in a Neotropical Rainforest
Q90353966Temporal shifts in the collective dermatologic microbiome of military trainees
Q89882397Tendentious effects of automated and manual metagenomic DNA purification protocols on broiler gut microbiome taxonomic profiling
Q37242884The Arctic Soil Bacterial Communities in the Vicinity of a Little Auk Colony
Q47720308The Biogeographical Distribution of Benthic Roseobacter Group Members along a Pacific Transect Is Structured by Nutrient Availability within the Sediments and Primary Production in Different Oceanic Provinces.
Q64892804The CURE for Cultivating Fastidious Microbes.
Q59795707The Composition of Midgut Bacteria in Aedes aegypti (Diptera: Culicidae) That Are Naturally Susceptible or Refractory to Dengue Viruses
Q38633035The Cyanobacteria-Dominated Sponge Dactylospongia elegans in the South China Sea: Prokaryotic Community and Metagenomic Insights
Q33735408The Effects of Cropping Regimes on Fungal and Bacterial Communities of Wheat and Faba Bean in a Greenhouse Pot Experiment Differ between Plant Species and Compartment
Q33854449The Gut Microbiota of Healthy Chilean Subjects Reveals a High Abundance of the Phylum Verrucomicrobia
Q92397431The Honeybee Gut Microbiota Is Altered after Chronic Exposure to Different Families of Insecticides and Infection by Nosema ceranae
Q34402752The Hospital Microbiome Project: Meeting report for the 2nd Hospital Microbiome Project, Chicago, USA, January 15(th), 2013.
Q64900396The Human Mesenteric Lymph Node Microbiome Differentiates Between Crohn's Disease and Ulcerative Colitis.
Q52356918The Impact of Alkaliphilic Biofilm Formation on the Release and Retention of Carbon Isotopes from Nuclear Reactor Graphite.
Q92811996The Impact of Primer Design on Amplicon-Based Metagenomic Profiling Accuracy: Detailed Insights into Bifidobacterial Community Structure
Q92815897The Influence of Modernization and Disease on the Gastric Microbiome of Orang Asli, Myanmars and Modern Malaysians
Q43268583The Low-Diversity Fecal Microbiota of the Critically Endangered Kākāpō Is Robust to Anthropogenic Dietary and Geographic Influences
Q60912244The Metabolic Response to a Low Amino Acid Diet is Independent of Diet-Induced Shifts in the Composition of the Gut Microbiome
Q47548278The Mexican bean beetle (Epilachna varivestis) regurgitome and insights into beetle-borne virus specificity.
Q90345138The Microbial Diversity of Cabbage Pest Delia radicum Across Multiple Life Stages
Q38682462The Microbiome in Posttraumatic Stress Disorder and Trauma-Exposed Controls: An Exploratory Study
Q35890206The Microbiome of Ehrlichia-Infected and Uninfected Lone Star Ticks (Amblyomma americanum)
Q33829911The Microbiome of Endophytic, Wood Colonizing Bacteria from Pine Trees as Affected by Pine Wilt Disease
Q64935217The Microbiome of the Maculinea-Myrmica Host-Parasite Interaction.
Q40499019The Monoclonal Antitoxin Antibodies (Actoxumab-Bezlotoxumab) Treatment Facilitates Normalization of the Gut Microbiota of Mice with Clostridium difficile Infection.
Q92982886The Pacific harbor seal gut microbiota in Mexico: Its relationship with diet and functional inferences
Q51736365The Pancreatic Cancer Microbiome Promotes Oncogenesis by Induction of Innate and Adaptive Immune Suppression.
Q64098165The Plastisphere - Uncovering tightly attached plastic "specific" microorganisms
Q36151378The Potential of Class II Bacteriocins to Modify Gut Microbiota to Improve Host Health
Q97644506The Respiratory Microbiome in Cystic Fibrosis: Compartment Patterns and Clinical Relationships in Early Stage Disease
Q89820532The Role of Microbial Mats in the Removal of Hexavalent Chromium and Associated Shifts in Their Bacterial Community Composition
Q35982880The Typhoid Toxin Promotes Host Survival and the Establishment of a Persistent Asymptomatic Infection
Q46580891The Urinary Microbiome Differs Significantly Between Patients With Chronic Prostatitis/Chronic Pelvic Pain Syndrome and Controls as Well as Between Patients With Different Clinical Phenotypes.
Q58789994The Use of a Mini-Bioreactor Fermentation System as a Reproducible, High-Throughput Batch Model of the Distal Colon
Q55331885The active microbial community more accurately reflects the anaerobic digestion process: 16S rRNA (gene) sequencing as a predictive tool.
Q58753007The all-intracellular order Legionellales is unexpectedly diverse, globally distributed and lowly abundant
Q33748729The bias associated with amplicon sequencing does not affect the quantitative assessment of bacterial community dynamics
Q35951507The bottlenose dolphin (Tursiops truncatus) faecal microbiota
Q90730921The capacity of wastewater treatment plants drives bacterial community structure and its assembly
Q93059689The characteristics of gut microbiota and commensal Enterobacteriaceae isolates in tree shrew (Tupaia belangeri)
Q35009432The choice of PCR primers has great impact on assessments of bacterial community diversity and dynamics in a wastewater treatment plant
Q36285260The choice of the DNA extraction method may influence the outcome of the soil microbial community structure analysis
Q92460456The core microbiome of sessile ciliate Stentor coeruleus is not shaped by the environment
Q61799560The effect of 16S rRNA region choice on bacterial community metabarcoding results
Q92055427The effect of diet and radiation on the bacterial symbiome of the melon fly, Zeugodacus cucurbitae (Coquillett)
Q91870798The effect of diet on the structure of gut bacterial community of sympatric pair of whitefishes (Coregonus lavaretus): one story more
Q34970982The effect of primer choice and short read sequences on the outcome of 16S rRNA gene based diversity studies
Q46381818The effect of reconstruction works on planktonic bacterial diversity of a unique thermal lake revealed by cultivation, molecular cloning and next generation sequencing.
Q55282714The effects of Bifidobacterium animalis ssp. lactis B94 on gastrointestinal wellness in adults with Prader-Willi syndrome: study protocol for a randomized controlled trial.
Q54997389The effects of sequencing platforms on phylogenetic resolution in 16 S rRNA gene profiling of human feces.
Q54940220The fallopian tube microbiome: implications for reproductive health.
Q55081979The fecal bacterial microbiota of bats; Slovenia.
Q33723118The fecal microbiota of semi-free-ranging wood bison (Bison bison athabascae).
Q89687144The global Microcystis interactome
Q57112600The gut microbiota drives the impact of bile acids and fat source in diet on mouse metabolism
Q58740602The gut microbiota promotes hepatic fatty acid desaturation and elongation in mice
Q33909384The human jejunum has an endogenous microbiota that differs from those in the oral cavity and colon
Q38274423The human microbiome: opportunities and challenges for clinical care
Q46695673The human salivary microbiome exhibits temporal stability in bacterial diversity.
Q55267086The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster.
Q37501505The impact of zinc oxide nanoparticles on the bacterial microbiome of activated sludge systems
Q56437623The influence of invasive jellyfish blooms on the aquatic microbiome in a coastal lagoon (Varano, SE Italy) detected by an Illumina-based deep sequencing strategy
Q55196534The influence of oxygen and methane on nitrogen fixation in subarctic Sphagnum mosses.
Q92425067The influence of timing of Maternal administration of Antibiotics during cesarean section on the intestinal Microbial colonization in Infants (MAMI-trial): study protocol for a randomised controlled trial
Q35975582The intestinal microbiota of piglets fed with wheat bran variants as characterised by 16S rRNA next-generation amplicon sequencing
Q48743597The liver-gut microbiota axis modulates hepatotoxicity of tacrine in the rat.
Q47693431The lung microbiome in health and disease.
Q46248528The lung microbiome in patients with pneumocystosis
Q47259241The metagenomic approach to characterization of the microbial community shift during the long-term cultivation of anammox-enriched granular sludge.
Q49868272The microbiome in PTEN hamartoma tumor syndrome.
Q39303192The microbiome of the octocoral Lobophytum pauciflorum: minor differences between sexes and resilience to short-term stress.
Q64064282The microbiome profiling of fungivorous black tinder fungus beetle reveals the insight into bacterial communities associated with larvae and adults
Q92006799The microbiota composition of the offspring of patients with gestational diabetes mellitus (GDM)
Q94547455The neovaginal microbiome of transgender women post-gender reassignment surgery
Q57021179The palatine tonsil bacteriome, but not the mycobiome, is altered in HIV infection
Q35578734The perinatal microbiome and pregnancy: moving beyond the vaginal microbiome
Q92024671The pitfalls of biodiversity proxies: Differences in richness patterns of birds, trees and understudied diversity across Amazonia
Q64097633The potential probiotic Lactobacillus rhamnosus CNCM I-3690 strain protects the intestinal barrier by stimulating both mucus production and cytoprotective response
Q64965504The preparation and clinical application of diagnostic DNA microarray for the detection of pathogens in intracranial bacterial and fungal infections.
Q21131079The presence of hydrogenotrophic methanogens in the inoculum improves methane gas production in microbial electrolysis cells
Q50060815The relationships between faecal egg counts and gut microbial composition in UK Thoroughbreds infected by cyathostomins.
Q36254351The respiratory microbiome in bronchial mucosa and secretions from severe IgE-mediated asthma patients
Q64264825The role of fungi in heterogeneous sediment microbial networks
Q98386038The role of seagrass vegetation and local environmental conditions in shaping benthic bacterial and macroinvertebrate communities in a tropical coastal lagoon
Q64247319The significance of microbiome in personalized medicine
Q97530037The sources and transmission routes of microbial populations throughout a meat processing facility
Q64064548The sponge microbiome within the greater coral reef microbial metacommunity
Q89984790The structure of microbial populations in Nelore GIT reveals inter-dependency of methanogens in feces and rumen
Q91605889The urinary microbiome shows different bacterial genera in renal transplant recipients and non-transplant patients at time of acute kidney injury - a pilot study
Q40462185The use of PCR-DGGE to determine bacterial fingerprints for poultry and red meat abattoir effluent.
Q35824726The vaginal microbiome is stable in prepubertal and sexually mature Ellegaard Göttingen Minipigs throughout an estrous cycle
Q100504036The wasted chewing gum bacteriome
Q92999757The water depth-dependent co-occurrence patterns of marine bacteria in shallow and dynamic Southern Coast, Korea
Q49795406Thermal regime and host clade, rather than geography, drive Symbiodinium and bacterial assemblages in the scleractinian coral Pocillopora damicornis sensu lato.
Q102141462Thermogenic hydrocarbon biodegradation by diverse depth-stratified microbial populations at a Scotian Basin cold seep
Q57085099Thermophilic endospores associated with migrated thermogenic hydrocarbons in deep Gulf of Mexico marine sediments
Q47707758Time Course-Dependent Methanogenic Crude Oil Biodegradation: Dynamics of Fumarate Addition Metabolites, Biodegradative Genes, and Microbial Community Composition
Q46242692Timing of food intake impacts daily rhythms of human salivary microbiota: a randomized, crossover study.
Q37486656Tissue-Associated Bacterial Alterations in Rectal Carcinoma Patients Revealed by 16S rRNA Community Profiling
Q91564833Tomato plants rather than fertilizers drive microbial community structure in horticultural growing media
Q38895030Top-down control of carbon sequestration: grazing affects microbial structure and function in salt marsh soils.
Q41815381Total rRNA-Seq Analysis Gives Insight into Bacterial, Fungal, Protozoal and Archaeal Communities in the Rumen Using an Optimized RNA Isolation Method
Q57242994Towards the unification of sequence-based classification and sequence-based identification of host-associated microorganisms
Q46824992Transformation of monothioarsenate by haloalkaliphilic, anoxygenic photosynthetic purple sulfur bacteria
Q50057867Transient influence of blood meal and natural environment on blacklegged tick bacterial communities.
Q35902896Transition from freshwater to seawater reshapes the skin-associated microbiota of Atlantic salmon
Q51740065Treatment With High-Hydrostatic Pressure, Activated Film Packaging With Thymol Plus Enterocin AS-48, and Its Combination Modify the Bacterial Communities of Refrigerated Sea Bream (Sparus aurata) Fillets.
Q41143677Tumour-associated and non-tumour-associated microbiota in colorectal cancer
Q36916603Ubiquitous Gammaproteobacteria dominate dark carbon fixation in coastal sediments.
Q55138937Ugly ducklings-the dark side of plastic materials in contact with potable water.
Q64906082Ultra-small microorganisms in the polyextreme conditions of the Dallol volcano, Northern Afar, Ethiopia.
Q36131283Uncovering Trophic Interactions in Arthropod Predators through DNA Shotgun-Sequencing of Gut Contents.
Q64106707Uncovering the hidden marine sponge microbiome by applying a multi-primer approach
Q90197094Understanding pseudo-albinism in sole (Solea senegalensis): a transcriptomics and metagenomics approach
Q33774730Unexpected Dominance of Elusive Acidobacteria in Early Industrial Soft Coal Slags
Q41911619Unexplored Archaeal Diversity in the Great Ape Gut Microbiome.
Q43972647Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
Q64109838Unprecedented bacterial community richness in soybean nodules vary with cultivar and water status
Q96304688Unraveling the Complexity of Soil Microbiomes in a Large-Scale Study Subjected to Different Agricultural Management in Styria
Q38602984Unraveling the gut microbiome of the long-lived naked mole-rat
Q30755503Unraveling the outcome of 16S rDNA-based taxonomy analysis through mock data and simulations
Q101121060Unravelling the gut bacteriome of Ips (Coleoptera: Curculionidae: Scolytinae): identifying core bacterial assemblage and their ecological relevance
Q42357582Unusual Butane- and Pentanetriol-Based Tetraether Lipids in Methanomassiliicoccus luminyensis, a Representative of the Seventh Order of Methanogens
Q92282966Unveiled feather microcosm: feather microbiota of passerine birds is closely associated with host species identity and bacteriocin-producing bacteria
Q30838784Urea uptake and carbon fixation by marine pelagic bacteria and archaea during the Arctic summer and winter seasons
Q35058071Use of 16S rRNA gene for identification of a broad range of clinically relevant bacterial pathogens
Q89967426Use of Changestat for Growth Rate Studies of Gut Microbiota
Q59811551Use of next generation sequencing to investigate the microbiota of experimentally induced wounds and the effect of bandaging in horses
Q90122598Using Mothur to Determine Bacterial Community Composition and Structure in 16S Ribosomal RNA Datasets
Q33853145Variation between the oral and faecal microbiota in a free-living passerine bird, the great tit (Parus major).
Q38911800Variation in Biological Soil Crust Bacterial Abundance and Diversity as a Function of Climate in Cold Steppe Ecosystems in the Intermountain West, USA.
Q89514348Variations in association of nasal microbiota with virulent and non-virulent strains of Glaesserella (Haemophilus) parasuis in weaning piglets
Q46253595Vertical vs. horizontal transmission of the microbiome in a key disease vector, Ixodes pacificus.
Q40198897Viable bacteria persist on antibiotic spacers following two-stage revision for periprosthetic joint infection
Q94464348Vibrio and Bacterial Communities Across a Pollution Gradient in the Bay of Bengal: Unraveling Their Biogeochemical Drivers
Q34542971Virus-mediated archaeal hecatomb in the deep seafloor
Q92011987Volatile Fatty Acids Production from Microalgae Biomass: Anaerobic Digester Performance and Population Dynamics during Stable Conditions, Starvation, and Process Recovery
Q57151588Wastewater treatment plant resistomes are shaped by bacterial composition, genetic exchange, and upregulated expression in the effluent microbiomes
Q55235034Water Masses and Depth Structure Prokaryotic and T4-Like Viral Communities Around Hydrothermal Systems of the Nordic Seas.
Q91410763Whole metagenome sequencing of cecum microbiomes in Ethiopian indigenous chickens from two different altitudes reveals antibiotic resistance genes
Q28553295Year-Long Monitoring of Physico-Chemical and Biological Variables Provide a Comparative Baseline of Coral Reef Functioning in the Central Red Sea
Q33742399You Are What You Eat: A Genomic Analysis of the Gut Microbiome of Captive and Wild Octopus vulgaris Paralarvae and Their Zooplankton Prey
Q96816931Zebrafish (Danio rerio) physiological and behavioural responses to insect-based diets: a multidisciplinary approach
Q37349196mdRNA-Seq analysis of marine microbial communities from the northern Red Sea.
Q36434855probeBase--an online resource for rRNA-targeted oligonucleotide probes and primers: new features 2016
Q33578966β-Klotho deficiency protects against obesity through a crosstalk between liver, microbiota, and brown adipose tissue.
Q28585266Reconstruction of the Metabolic Potential of Acidophilic Sideroxydans Strains from the Metagenome of an Microaerophilic Enrichment Culture of Acidophilic Iron-Oxidizing Bacteria from a Pilot Plant for the Treatment of Acid Mine Drainage Reveals Meta

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