RNA-dependent control of gene amplification

scientific article

RNA-dependent control of gene amplification is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2010PNAS..10722134H
P356DOI10.1073/PNAS.1009284107
P932PMC publication ID3009782
P698PubMed publication ID20974970
P5875ResearchGate publication ID47544408

P50authorWei-Jen ChangQ67219068
Hans-Joachim LippsQ123734319
P2093author name stringFranziska Jönsson
Gero Heyse
P2860cites workThe DNA of ciliated protozoaQ24634620
Telomere end-binding proteins control the formation of G-quadruplex DNA structures in vivoQ28270626
Telomeric DNA-protein interactions of Oxytricha macronuclear DNA.Q30461693
The pathway to detangle a scrambled geneQ33340248
RNA-mediated epigenetic programming of a genome-rearrangement pathwayQ34008442
Genome gymnastics: unique modes of DNA evolution and processing in ciliatesQ34185433
The amplification of ribosomal RNA genes involves a rolling circle intermediateQ34739345
Palindromic gene amplification--an evolutionarily conserved role for DNA inverted repeats in the genomeQ34943438
Evolution and assembly of an extremely scrambled geneQ35108950
Developmental gene amplification and origin regulationQ35965832
Developmental gene amplification: insights into DNA replication and gene expressionQ36056184
Multiple replication origins are used during Drosophila chorion gene amplificationQ36222998
Tetrahymena ORC contains a ribosomal RNA fragment that participates in rDNA origin recognition.Q36274726
Differential synthesis of the genes for ribosomal RNA during amphibian oögenesisQ36474795
New insights into the macronuclear development in ciliatesQ36881683
Spatial and temporal plasticity of chromatin during programmed DNA-reorganization in Stylonychia macronuclear development.Q37016166
The genome of hypotrichous ciliatesQ39588160
Gene amplification in cultured cellsQ39637617
A subtelomeric DNA sequence is required for correct processing of the macronuclear DNA sequences during macronuclear development in the hypotrichous ciliate Stylonychia lemnaeQ39728340
Faithful expression of a heterologous gene carried on an artificial macronuclear chromosome in Euplotes crassusQ39728600
Specific gene amplification in oocytes. Oocyte nuclei contain extrachromosomal replicas of the genes for ribosomal RNA.Q39969348
Early dihydrofolate reductase gene amplification events in CHO cells usually occur on the same chromosome arm as the original locusQ41759145
Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymenaQ42683656
Template-guided recombination for IES elimination and unscrambling of genes in stichotrichous ciliates.Q52105862
DNA intermediates and telomere addition during genome reorganization in Euplotes crassus.Q52266984
Differential amplification of pheromone genes of the ciliateEuplotes raikoviQ58862186
The development of the macronucleus in the ciliated protozoan Stylonychia mytilusQ67294933
Differential DNA amplification and copy number control in the hypotrichous ciliate Euplotes crassusQ67986789
Telomere proteins: specific recognition and protection of the natural termini of Oxytricha macronuclear DNAQ70308671
Timing of differential amplification of macronucleus-destined sequences during macronuclear development in the hypotrichous ciliate Euplotes crassusQ71468178
The organization and amplification of two chromosomal domains containing Drosophila chorion genesQ71585080
A micronuclear locus containing three protein-coding genes remains linked during macronuclear development in the spirotrichous ciliate HolostichaQ80440119
Exploiting nuclear duality of ciliates to analyse topological requirements for DNA replication and transcriptionQ81133769
P433issue51
P407language of work or nameEnglishQ1860
P304page(s)22134-22139
P577publication date2010-10-25
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleRNA-dependent control of gene amplification
P478volume107

Reverse relations

cites work (P2860)
Q5547235327nt-RNAs guide histone variant deposition via 'RNA-induced DNA replication interference' and thus transmit parental genome partitioning in Stylonychia.
Q35072304Analyses of alternatively processed genes in ciliates provide insights into the origins of scrambled genomes and may provide a mechanism for speciation.
Q30592478Can abundance of protists be inferred from sequence data: a case study of foraminifera
Q24300841DICER- and AGO3-dependent generation of retinoic acid-induced DR2 Alu RNAs regulates human stem cell proliferation
Q53519629Disentangling sources of variation in SSU rDNA sequences from single cell analyses of ciliates: impact of copy number variation and experimental error.
Q33946185Exploiting Oxytricha trifallax nanochromosomes to screen for non-coding RNA genes
Q52567777Genome plasticity in response to stress in Tetrahymena thermophila: selective and reversible chromosome amplification and paralogous expansion of metallothionein genes.
Q35153427Genome structure drives patterns of gene family evolution in ciliates, a case study using Chilodonella uncinata (Protista, Ciliophora, Phyllopharyngea)
Q37051931Genomes on the edge: programmed genome instability in ciliates
Q39423867Insights into transgenerational epigenetics from studies of ciliates
Q64947197Integrative rDNAomics-Importance of the Oldest Repetitive Fraction of the Eukaryote Genome.
Q34033181Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus
Q34438117Modulating somatic DNA copy number through maternal RNA
Q34022838Nanochromosome copy number does not correlate with RNA levels though patterns are conserved between strains of the ciliate morphospecies Chilodonella uncinata.
Q37471101Nuclear Noncoding RNAs and Genome Stability.
Q35780955Programmed Genome Rearrangements in the Ciliate Oxytricha
Q37908127RNA-Mediated Epigenetic Programming of Genome Rearrangements
Q58862342RNA-dependent genome processing during nuclear differentiation: the model systems of stichotrichous ciliates
Q41458798RNA-template dependent de novo telomere addition.
Q35590194Role for RNA:DNA hybrids in origin-independent replication priming in a eukaryotic system.
Q21145727The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes
Q34007303The draft assembly of the radically organized Stylonychia lemnae macronuclear genome
Q64925875Twisted Tales: Insights into Genome Diversity of Ciliates Using Single-Cell 'Omics.