A fast EM algorithm for BayesA-like prediction of genomic breeding values

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A fast EM algorithm for BayesA-like prediction of genomic breeding values is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2012PLoSO...749157S
P356DOI10.1371/JOURNAL.PONE.0049157
P932PMC publication ID3494698
P698PubMed publication ID23152868
P5875ResearchGate publication ID233419451

P50authorDorian GarrickQ55545290
P2093author name stringJack C M Dekkers
Rohan L Fernando
Xiaochen Sun
Long Qu
P2860cites workIncreased accuracy of artificial selection by using the realized relationship matrix.Q51851627
Genomic selection using different marker types and densities.Q53036865
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EM algorithm for Bayesian estimation of genomic breeding valuesQ33525714
Genomic selection and complex trait prediction using a fast EM algorithm applied to genome-wide markersQ33726255
The impact of genetic relationship information on genomic breeding values in German Holstein cattleQ33728499
Extension of the bayesian alphabet for genomic selectionQ33909148
Genomic breeding value prediction and QTL mapping of QTLMAS2010 data using Bayesian MethodsQ33915755
The impact of genetic architecture on genome-wide evaluation methodsQ34007836
Best linear unbiased prediction of genomic breeding values using a trait-specific marker-derived relationship matrixQ34115303
Breeding value prediction for production traits in layer chickens using pedigree or genomic relationships in a reduced animal model.Q34564266
Genomic evaluations with many more genotypesQ34668271
Genomic selection: prediction of accuracy and maximisation of long term responseQ34809133
Invited review: Genomic selection in dairy cattle: progress and challengesQ34928306
The impact of genetic relationship information on genome-assisted breeding valuesQ36416180
Hierarchical generalized linear models for multiple quantitative trait locus mappingQ37117018
Predicting quantitative traits with regression models for dense molecular markers and pedigreeQ37173407
Accuracy of breeding values of 'unrelated' individuals predicted by dense SNP genotypingQ37255591
Additive genetic variability and the Bayesian alphabetQ37351831
Invited review: reliability of genomic predictions for North American Holstein bulls.Q37358437
The accuracy of Genomic Selection in Norwegian red cattle assessed by cross-validationQ37424969
Accuracy of genomic breeding values in multi-breed dairy cattle populationsQ37470193
A fast algorithm for BayesB type of prediction of genome-wide estimates of genetic valueQ42023694
Technical note: Derivation of equivalent computing algorithms for genomic predictions and reliabilities of animal merit.Q43549374
A relationship matrix including full pedigree and genomic informationQ43806098
Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic informationQ46334132
Efficient methods to compute genomic predictionsQ46643131
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue11
P407language of work or nameEnglishQ1860
P304page(s)e49157
P577publication date2012-11-09
P1433published inPLOS OneQ564954
P1476titleA fast EM algorithm for BayesA-like prediction of genomic breeding values
P478volume7

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cites work (P2860)
Q35555858A computationally efficient algorithm for genomic prediction using a Bayesian model
Q36139740A hybrid expectation maximisation and MCMC sampling algorithm to implement Bayesian mixture model based genomic prediction and QTL mapping
Q52644947A nested mixture model for genomic prediction using whole-genome SNP genotypes.
Q59281375An Integrated Approach to Empirical Bayesian Whole Genome Prediction Modeling
Q37331196Contributions of linkage disequilibrium and co-segregation information to the accuracy of genomic prediction
Q51020823Exploring the areas of applicability of whole-genome prediction methods for Asian rice (Oryza sativa L.).
Q30652854Fast genomic predictions via Bayesian G-BLUP and multilocus models of threshold traits including censored Gaussian data.
Q47793360Genome-Wide Association Analyses Based on Broadly Different Specifications for Prior Distributions, Genomic Windows, and Estimation Methods
Q33658640Genome-wide association mapping including phenotypes from relatives without genotypes in a single-step (ssGWAS) for 6-week body weight in broiler chickens.
Q41146997Incorporation of causative quantitative trait nucleotides in single-step GBLUP.
Q36677246Inexpensive Computation of the Inverse of the Genomic Relationship Matrix in Populations with Small Effective Population Size
Q39015085Invited review: efficient computation strategies in genomic selection
Q36972191Priors in whole-genome regression: the bayesian alphabet returns

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