Folding, misfolding, and amyloid protofibril formation of WW domain FBP28.

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Folding, misfolding, and amyloid protofibril formation of WW domain FBP28. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1529/BIOPHYSJ.105.076406
P932PMC publication ID1459504
P698PubMed publication ID16533840
P5875ResearchGate publication ID7244423

P2093author name stringLars Nordenskiöld
Yuguang Mu
James P Tam
P2860cites workThe transcription elongation factor CA150 interacts with RNA polymerase II and the pre-mRNA splicing factor SF1Q24548273
Ultrafast folding of WW domains without structured aromatic clusters in the denatured stateQ24555106
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Solution structure of a Nedd4 WW domain-ENaC peptide complexQ27631393
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Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfoldingQ29620340
Experiment and theory highlight role of native state topology in SH3 foldingQ30175284
The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved.Q30175285
The free energy landscape for beta hairpin folding in explicit waterQ30667299
Comparative structural and energetic analysis of WW domain-peptide interactionsQ30842464
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Testing protein-folding simulations by experiment: B domain of protein A.Q33781752
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Can a continuum solvent model reproduce the free energy landscape of a beta -hairpin folding in water?Q34189756
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The protein folding 'speed limit'.Q34315486
Context-dependent contributions of backbone hydrogen bonding to beta-sheet folding energeticsQ34330563
The structural basis for biphasic kinetics in the folding of the WW domain from a formin-binding protein: lessons for protein design?Q34919441
Peptide folding simulationsQ35119726
Measuring the rate of intramolecular contact formation in polypeptidesQ35155346
Rapid amyloid fiber formation from the fast-folding WW domain FBP28.Q35813622
Folding dynamics and mechanism of beta-hairpin formationQ36890665
Integrating folding kinetics and protein function: biphasic kinetics and dual binding specificity in a WW domainQ37073450
Folding simulations of a three-stranded antiparallel beta -sheet peptideQ37260196
Folding cooperativity in a three-stranded beta-sheet modelQ39409726
Structure of Met-enkephalin in explicit aqueous solution using replica exchange molecular dynamicsQ43864571
The influence of different treatments of electrostatic interactions on the thermodynamics of folding of peptides.Q45992079
Structure and energy landscape of a photoswitchable peptide: a replica exchange molecular dynamics studyQ46565537
Reproducible polypeptide folding and structure prediction using molecular dynamics simulations.Q51961941
Evolutionary conservation in protein folding kinetics.Q52079876
Capturing intermediate structures of Alzheimer's beta-amyloid, Abeta(1-40), by solid-state NMR spectroscopyQ57187682
A consistent potential energy parameter set for lipids: dipalmitoylphosphatidylcholine as a benchmark of the GROMOS96 45A3 force fieldQ58005581
Interpreting the folding kinetics of helical proteinsQ58041751
The folding mechanism of a beta-sheet: the WW domainQ74291804
Folding-unfolding thermodynamics of a beta-heptapeptide from equilibrium simulationsQ74452346
Energy landscape of a small peptide revealed by dihedral angle principal component analysisQ80947716
Toward assessing the position-dependent contributions of backbone hydrogen bonding to beta-sheet folding thermodynamics employing amide-to-ester perturbationsQ81183236
P433issue11
P407language of work or nameEnglishQ1860
P1104number of pages10
P304page(s)3983-3992
P577publication date2006-03-13
P1433published inBiophysical JournalQ2032955
P1476titleFolding, misfolding, and amyloid protofibril formation of WW domain FBP28.
P478volume90

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cites work (P2860)
Q41999559(Un)Folding mechanisms of the FBP28 WW domain in explicit solvent revealed by multiple rare event simulation methods.
Q34553763A study of the influence of charged residues on β-hairpin formation by nuclear magnetic resonance and molecular dynamics
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Q36651989Effects of mutation, truncation, and temperature on the folding kinetics of a WW domain
Q34793243Folding kinetics of WW domains with the united residue force field for bridging microscopic motions and experimental measurements.
Q37001294Folding mechanisms of individual beta-hairpins in a Go model of Pin1 WW domain by all-atom molecular dynamics simulations
Q35225705Intrinsic determinants of Aβ(12-24) pH-dependent self-assembly revealed by combined computational and experimental studies.
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Q37055450Local vs global motions in protein folding
Q47704249Parallel folding pathways of Fip35 WW domain explained by infrared spectra and their computer simulation
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Q42238431Probing Medin Monomer Structure and its Amyloid Nucleation Using 13C-Direct Detection NMR in Combination with Structural Bioinformatics
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Q35889802The Role of Electrostatic Interactions in Folding of β-Proteins
Q42732147The ensemble folding kinetics of the FBP28 WW domain revealed by an all-atom Monte Carlo simulation in a knowledge-based potential
Q34119805WW domain folding complexity revealed by infrared spectroscopy
Q84659681pH-Dependent Interactions of Human Islet Amyloid Polypeptide Segments with Insulin Studied by Replica Exchange Molecular Dynamics Simulations

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