SDG2-mediated H3K4 methylation is required for proper Arabidopsis root growth and development

scientific article

SDG2-mediated H3K4 methylation is required for proper Arabidopsis root growth and development is …
instance of (P31):
scholarly articleQ13442814

External links are
P819ADS bibcode2013PLoSO...856537Y
P356DOI10.1371/JOURNAL.PONE.0056537
P932PMC publication ID3585709
P698PubMed publication ID23483879
P5875ResearchGate publication ID236040180

P50authorWen-Hui ShenQ57557904
Haiyang FengQ59702952
P2093author name stringYu Yu
Aiwu Dong
Xiaozhen Yao
P2860cites workRBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3Q28289886
Genome regulation by polycomb and trithorax proteinsQ28289984
Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modificationsQ30448690
An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis rootQ33179270
FASCIATA genes for chromatin assembly factor-1 in arabidopsis maintain the cellular organization of apical meristemsQ33335316
AtPIN4 mediates sink-driven auxin gradients and root patterning in ArabidopsisQ33336995
Auxin-mediated cell cycle activation during early lateral root initiationQ33337778
SCARECROW is involved in positioning the stem cell niche in the Arabidopsis root meristemQ33338030
High-resolution whole-mount imaging of three-dimensional tissue organization and gene expression enables the study of Phloem development and structure in ArabidopsisQ33340209
Chromatin organization and cell fate switch respond to positional information in ArabidopsisQ33341936
Auxin-dependent regulation of lateral root positioning in the basal meristem of ArabidopsisQ33343590
Overexpression of the non-canonical Aux/IAA genes causes auxin-related aberrant phenotypes in ArabidopsisQ33345251
Auxin acts as a local morphogenetic trigger to specify lateral root founder cells.Q33345686
Hypersensitivity to DNA damage in plant stem cell nichesQ33348230
Auxin regulates distal stem cell differentiation in Arabidopsis rootsQ33349236
A novel aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identityQ33349879
Brassinosteroid perception in the epidermis controls root meristem sizeQ33350527
Brassinosteroids control meristem size by promoting cell cycle progression in Arabidopsis rootsQ33350530
The CHD3 chromatin remodeler PICKLE and polycomb group proteins antagonistically regulate meristem activity in the Arabidopsis rootQ33350885
Growth and development of the root apical meristemQ33352512
Auxin and epigenetic regulation of SKP2B, an F-box that represses lateral root formationQ33354013
Cellular organisation of the Arabidopsis thaliana rootQ33367389
Organization and cell differentiation in lateral roots of Arabidopsis thalianaQ33367959
Short-range control of cell differentiation in the Arabidopsis root meristemQ33368367
Methylated H3K4, a Transcription-Associated Histone Modification, Is Involved in the DNA Damage Response PathwayQ33701701
Arabidopsis IWS1 interacts with transcription factor BES1 and is involved in plant steroid hormone brassinosteroid regulated gene expressionQ33734638
A simple method for gene expression and chromatin profiling of individual cell types within a tissueQ34000729
Double-strand break-induced transcriptional silencing is associated with loss of tri-methylation at H3K4.Q34045935
Histone acetylation affects expression of cellular patterning genes in the Arabidopsis root epidermisQ34063461
Trithorax group proteins: switching genes on and keeping them activeQ34235226
SET DOMAIN GROUP2 is the major histone H3 lysine 4 trimethyltransferase in ArabidopsisQ34276454
Local, efflux-dependent auxin gradients as a common module for plant organ formation.Q34280509
IAA8 involved in lateral root formation interacts with the TIR1 auxin receptor and ARF transcription factors in ArabidopsisQ34389598
Increased frequency of homologous recombination and T-DNA integration in Arabidopsis CAF-1 mutantsQ35191098
Arabidopsis trithorax-related3/SET domain GROUP2 is required for the winter-annual habit of Arabidopsis thaliana.Q35937234
Regulation of cell identity by plant Polycomb and trithorax group proteinsQ37777748
Context, Specificity, and Self-Organization in Auxin ResponseQ37806865
Histone modifications in transcriptional activation during plant developmentQ37903460
Histone H2AX phosphorylation: a marker for DNA damageQ39286636
AtPIN2 defines a locus of Arabidopsis for root gravitropism controlQ41877199
Efflux-dependent auxin gradients establish the apical-basal axis of ArabidopsisQ42452628
The PLETHORA genes mediate patterning of the Arabidopsis root stem cell nicheQ42468459
SET DOMAIN GROUP25 encodes a histone methyltransferase and is involved in FLOWERING LOCUS C activation and repression of flowering.Q42632596
Arabidopsis SET DOMAIN GROUP2 is required for H3K4 trimethylation and is crucial for both sporophyte and gametophyte development.Q42841363
Dysfunction of chromatin assembly factor 1 induces shortening of telomeres and loss of 45S rDNA in Arabidopsis thalianaQ42941299
ARABIDOPSIS TRITHORAX-RELATED7 is required for methylation of lysine 4 of histone H3 and for transcriptional activation of FLOWERING LOCUS C.Q43255379
ATX-1, an Arabidopsis homolog of trithorax, activates flower homeotic genesQ44406298
Molecular and reverse genetic characterization of NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) genes unravels their function in transcription and nucleotide excision repair in Arabidopsis thalianaQ46116758
The highly similar Arabidopsis homologs of trithorax ATX1 and ATX2 encode proteins with divergent biochemical functionsQ46674693
ARABIDOPSIS TRITHORAX1 dynamically regulates FLOWERING LOCUS C activation via histone 3 lysine 4 trimethylationQ46674697
Technical advance: spatio-temporal analysis of mitotic activity with a labile cyclin-GUS fusion proteinQ47898913
Members of the GCN5 histone acetyltransferase complex regulate PLETHORA-mediated root stem cell niche maintenance and transit amplifying cell proliferation in ArabidopsisQ47985264
Changes in auxin response from mutations in an AUX/IAA geneQ48039627
A chromatin link that couples cell division to root epidermis patterning in Arabidopsis.Q48080016
Developmental expression of the arabidopsis cyclin gene cyc1AtQ49167855
Domain II mutations in CRANE/IAA18 suppress lateral root formation and affect shoot development in Arabidopsis thaliana.Q51956296
MASSUGU2 encodes Aux/IAA19, an auxin-regulated protein that functions together with the transcriptional activator NPH4/ARF7 to regulate differential growth responses of hypocotyl and formation of lateral roots in Arabidopsis thaliana.Q52094867
Arabidopsis homologues of the histone chaperone ASF1 are crucial for chromatin replication and cell proliferation in plant development.Q53273719
Auxin transport is sufficient to generate a maximum and gradient guiding root growth.Q53520095
Auxin, actin and growth of the Arabidopsis thaliana primary root.Q53560521
Arabidopsis NRP1 and NRP2 encode histone chaperones and are required for maintaining postembryonic root growth.Q53586883
Functional Genomic Analysis of CAF-1 Mutants inArabidopsis thalianaQ57831528
The RETINOBLASTOMA-RELATED Gene Regulates Stem Cell Maintenance in Arabidopsis RootsQ58832988
Lateral root formation is blocked by a gain-of-function mutation in the SOLITARY-ROOT/IAA14 gene of ArabidopsisQ77683162
Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 geneQ77814752
NAP1 family histone chaperones are required for somatic homologous recombination in ArabidopsisQ83993222
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue2
P407language of work or nameEnglishQ1860
P304page(s)e56537
P577publication date2013-02-19
P1433published inPLOS OneQ564954
P1476titleSDG2-mediated H3K4 methylation is required for proper Arabidopsis root growth and development
P478volume8

Reverse relations

cites work (P2860)
Q39091760AhDGR2, an amaranth abiotic stress-induced DUF642 protein gene, modifies cell wall structure and composition and causes salt and ABA hyper-sensibility in transgenic Arabidopsis
Q37404356An efficient immunodetection method for histone modifications in plants.
Q64271548Arabidopsis S2Lb links AtCOMPASS-like and SDG2 activity in H3K4me3 independently from histone H2B monoubiquitination
Q33359074Arabidopsis homolog of trithorax1 (ATX1) is required for cell production, patterning, and morphogenesis in root development.
Q33924133Asymmetric cell division in plants: mechanisms of symmetry breaking and cell fate determination
Q58554295Chromatin-Based Regulation of Plant Root Development
Q39113151Circadian expression profiles of chromatin remodeling factor genes in Arabidopsis
Q30062103Diversification and evolution of the SDG gene family in Brassica rapa after the whole genome triplication
Q90266119Dynamic Changes in Genome-Wide Histone3 Lysine27 Trimethylation and Gene Expression of Soybean Roots in Response to Salt Stress
Q50536825Emerging Trends in Epigenetic Regulation of Nutrient Deficiency Response in Plants.
Q26770647Epigenetic Control of Cell Division and Cell Differentiation in the Root Apex
Q38203164Gene activation and cell fate control in plants: a chromatin perspective
Q35867024Identification of regulatory network hubs that control lipid metabolism in Chlamydomonas reinhardtii
Q50592566MORF-RELATED GENE702, a Reader Protein of Trimethylated Histone H3 Lysine 4 and Histone H3 Lysine 36, Is Involved in Brassinosteroid-Regulated Growth and Flowering Time Control in Rice.
Q52768662Monoubiquitination of histone 2B at the disease resistance gene locus regulates its expression and impacts immune responses in Arabidopsis.
Q53643830Polycomb-group histone methyltransferase CLF is required for proper somatic recombination in Arabidopsis.
Q35248040Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression
Q91741513Reprogramming of Cell Fate During Root Regeneration by Transcriptional and Epigenetic Networks
Q48216993SDG2-Mediated H3K4me3 Is Crucial for Chromatin Condensation and Mitotic Division during Male Gametogenesis in Arabidopsis
Q45941036State of the Art: trxG Factor Regulation of Post-embryonic Plant Development.
Q27015078Sustainable harvest: managing plasticity for resilient crops
Q64226678The Sin3-HDAC Complex Facilitates Temporal Histone Deacetylation at the and Loci for Robust Circadian Oscillation
Q90063142The function of histone lysine methylation related SET domain group proteins in plants
Q38736060The transcript elongation factor SPT4/SPT5 is involved in auxin-related gene expression in Arabidopsis
Q26801623The use of comet assay in plant toxicology: recent advances
Q50542124[Reciprocity between active transcription and histone methylation].

Search more.