Genetic mapping of legume orthologs reveals high conservation of synteny between lentil species and the sequenced genomes of Medicago and chickpea

scientific article

Genetic mapping of legume orthologs reveals high conservation of synteny between lentil species and the sequenced genomes of Medicago and chickpea is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.3389/FPLS.2014.00676
P932PMC publication ID4256995
P698PubMed publication ID25538716
P5875ResearchGate publication ID270054720

P50authorNoelia Carrasquilla-GarciaQ119944105
P2093author name stringDouglas R Cook
R Varma Penmetsa
Andrew D Farmer
Albert Vandenberg
Kirstin E Bett
Neha Gujaria-Verma
Sally L Vail
P2860cites workNew insight into the history of domesticated apple: secondary contribution of the European wild apple to the genome of cultivated varietiesQ21092418
The Medicago genome provides insight into the evolution of rhizobial symbiosesQ22122164
Versatile and open software for comparing large genomesQ24807126
Sequencing technologies - the next generationQ27860568
CAP3: A DNA sequence assembly programQ27860964
A sequencing method based on real-time pyrophosphateQ28279786
Next-generation DNA sequencing methodsQ28285066
Three sequenced legume genomes and many crop species: rich opportunities for translational genomicsQ28750277
Circos: an information aesthetic for comparative genomicsQ29547653
GMAP: a genomic mapping and alignment program for mRNA and EST sequencesQ29616836
Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiaryQ29618553
A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs.Q30438197
Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plantsQ30837046
Comparative map and trait viewer (CMTV): an integrated bioinformatic tool to construct consensus maps and compare QTL and functional genomics data across genomes and experimentsQ30978696
A genetic linkage map of Lens sp. based on microsatellite and AFLP markers and the localization of fusarium vascular wilt resistanceQ33210873
Genomic diversity and introgression in O. sativa reveal the impact of domestication and breeding on the rice genomeQ33592868
Highly-multiplexed SNP genotyping for genetic mapping and germplasm diversity studies in pea.Q33654691
Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discoveryQ33910547
Genetic patterns of domestication in pigeonpea (Cajanus cajan (L.) Millsp.) and wild Cajanus relatives.Q34321552
The genomic signature of crop-wild introgression in maizeQ34344526
Allelic dosage analysis with genotyping microarrays.Q34429361
Genome mapping in capsicum and the evolution of genome structure in the solanaceae.Q34607169
Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoidsQ34607671
Ancient orphan crop joins modern era: gene-based SNP discovery and mapping in lentilQ34626411
A sequence-based genetic map of Medicago truncatula and comparison of marker colinearity with M. sativaQ34643883
Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.).Q34852560
Linkages between restriction fragment length, isozyme, and morphological markers in lentilQ35043127
Variability for restriction fragment lengths and phylogenies in lentilQ35043169
Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomesQ35052103
Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varietiesQ35214712
Functional markers in plantsQ35579567
Bridging model and crop legumes through comparative genomicsQ36095557
Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumesQ36302052
High-throughput SNP discovery and genotyping for constructing a saturated linkage map of chickpea (Cicer arietinum L.).Q36323655
Large-scale development of cost-effective single-nucleotide polymorphism marker assays for genetic mapping in pigeonpea and comparative mapping in legumesQ36446823
Estimating genome conservation between crop and model legume speciesQ37593183
Molecular plant breeding: methodology and achievementsQ39554685
MapChart: software for the graphical presentation of linkage maps and QTLsQ39605798
Extensive macrosynteny between Medicago truncatula and Lens culinaris ssp. culinaris.Q40267716
High density molecular linkage maps of the tomato and potato genomesQ41863986
Comparative visualization of genetic and physical maps with Strudel.Q42717066
EST-SNP discovery and dense genetic mapping in lentil (Lens culinaris Medik.) enable candidate gene selection for boron toleranceQ43457852
Leveraging genomic resources of model species for the assessment of diversity and phylogeny in wild and domesticated lentilQ43749201
Distribution of highly repeated DNA sequences in species of the genus Lens MillerQ43768171
A high-throughput SNP marker system for parental polymorphism screening, and diversity analysis in common bean (Phaseolus vulgaris L.).Q43991420
Development of nuclear gene-derived molecular markers linked to legume genetic maps.Q45996054
Genetic mapping of an ancient translocation in the genus LensQ47397866
High-throughput SNP genotyping with the GoldenGate assay in maizeQ57245716
The Medicago truncatula reference accession A17 has an aberrant chromosomal configurationQ59203195
High-throughput genotyping with the GoldenGate assay in the complex genome of soybeanQ62857416
Single-nucleotide polymorphism analysis by pyrosequencingQ73775865
BeadArray technology: enabling an accurate, cost-effective approach to high-throughput genotypingQ74359341
High-throughput polymorphism screening and genotyping with high-density oligonucleotide arraysQ74618474
Comparative mapping between Medicago sativa and Pisum sativumQ80514336
Construction of intersubspecific molecular genetic map of lentil based on ISSR, RAPD and SSR markersQ85798400
Hybridization in the genus Lens by means of embryo cultureQ86800393
P4510describes a project that usesMUMmerQ6719063
P304page(s)676
P577publication date2014-12-05
P1433published inFrontiers in Plant ScienceQ27723840
P1476titleGenetic mapping of legume orthologs reveals high conservation of synteny between lentil species and the sequenced genomes of Medicago and chickpea
P478volume5

Reverse relations

cites work (P2860)
Q92072668A Bioinformatics Approach to Explore MicroRNAs as Tools to Bridge Pathways Between Plants and Animals. Is DNA Damage Response (DDR) a Potential Target Process?
Q92539175A Snapshot of the Trehalose Pathway During Seed Imbibition in Medicago truncatula Reveals Temporal- and Stress-Dependent Shifts in Gene Expression Patterns Associated With Metabolite Changes
Q37191176A gene-based map of the Nod factor-independent Aeschynomene evenia sheds new light on the evolution of nodulation and legume genomes.
Q60153746Capturing variation in (Fabaceae): Development and utility of an exome capture array for lentil
Q64114954Construction of a high-density interspecific (Lens culinaris x L. odemensis) genetic map based on functional markers for mapping morphological and agronomical traits, and QTLs affecting resistance to Ascochyta in lentil
Q35958366Gene-based SNP discovery in tepary bean (Phaseolus acutifolius) and common bean (P. vulgaris) for diversity analysis and comparative mapping.
Q40033737Genome-Wide Analysis of the AP2/ERF Superfamily Genes and their Responses to Abiotic Stress in Medicago truncatula.
Q38657920Molecular Breeding for Ascochyta Blight Resistance in Lentil: Current Progress and Future Directions
Q33789493QTL mapping reveals genetic determinants of fungal disease resistance in the wild lentil species Lens ervoides
Q39182013SNP-Based Linkage Mapping for Validation of QTLs for Resistance to Ascochyta Blight in Lentil

Search more.