Map of open and closed chromatin domains in Drosophila genome

scientific article

Map of open and closed chromatin domains in Drosophila genome is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1046903415
P356DOI10.1186/1471-2164-15-988
P932PMC publication ID4289254
P698PubMed publication ID25407537
P5875ResearchGate publication ID268787444

P50authorAmol C ShettyQ58578170
Todd CreasyQ77545357
P2093author name stringWeizhong Chang
Dmitry Nurminsky
Anup Mahurkar
Yezhou Sun
Amol Shetty
Beatrice Milon
Maria Nurminskaya
P2860cites workDNase-seq: a high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cellsQ24633746
TopHat: discovering splice junctions with RNA-SeqQ24655505
Regulated chromatin domain comprising cluster of co-expressed genes in Drosophila melanogasterQ24795549
Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cellsQ24811229
Discovery and characterization of chromatin states for systematic annotation of the human genomeQ29614411
Identification of functional elements and regulatory circuits by Drosophila modENCODEQ29617551
Refined DNase-seq protocol and data analysis reveals intrinsic bias in transcription factor footprint identificationQ30710808
An integrated software system for analyzing ChIP-chip and ChIP-seq dataQ33382059
Reprogramming the male gamete genome: a window to successful gene therapyQ33678674
The insulator protein SU(HW) fine-tunes nuclear lamina interactions of the Drosophila genomeQ33760885
Analyzing the global chromatin structure of keratinocytes by MNase-seqQ34040362
A lot about a little dot - lessons learned from Drosophila melanogaster chromosome 4.Q34179494
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome positionQ34375601
Comprehensive analysis of the chromatin landscape in Drosophila melanogasterQ35030499
A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locusQ35161605
Epigenetics: judge, jury and executioner of stem cell fate.Q36187815
The B-type lamin is required for somatic repression of testis-specific gene clustersQ37117525
The evolution and functional significance of nested gene structures in Drosophila melanogasterQ37270789
Core histone hyperacetylation co-maps with generalized DNase I sensitivity in the chicken beta-globin chromosomal domain.Q37631005
The nuclear lamina as a gene-silencing hub.Q37906984
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification.Q48522151
Large clusters of co-expressed genes in the Drosophila genome.Q52111333
A haploid expressed gene cluster exists as a single chromatin domain in human sperm.Q52509860
P407language of work or nameEnglishQ1860
P921main subjectDrosophilaQ312154
P304page(s)988
P577publication date2014-11-18
P1433published inBMC GenomicsQ15765854
P1476titleMap of open and closed chromatin domains in Drosophila genome
P478volume15

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cites work (P2860)
Q388613813D genomics imposes evolution of the domain model of eukaryotic genome organization
Q88738926Border Structure of Intercalary Heterochromatin Bands of Drosophila melanogaster Polytene Chromosomes
Q36051843Chromatin Heterogeneity and Distribution of Regulatory Elements in the Late-Replicating Intercalary Heterochromatin Domains of Drosophila melanogaster Chromosomes
Q38557052Coming to terms with chromatin structure
Q33362872Drosophila polytene chromosome bands formed by gene introns
Q36833441High-resolution mapping of H4K16 and H3K23 acetylation reveals conserved and unique distribution patterns in Arabidopsis and rice
Q64905820Molecular and genetic organization of bands and interbands in the dot chromosome of Drosophila melanogaster.
Q64104480Nuclear lamina integrity is required for proper spatial organization of chromatin in Drosophila
Q53833394Polytene Chromosomes - A Portrait of Functional Organization of the Drosophila Genome.
Q52586071Similarity in replication timing between polytene and diploid cells is associated with the organization of the Drosophila genome.
Q52613283Tethering of CHROMATOR and dCTCF proteins results in decompaction of condensed bands in the Drosophila melanogaster polytene chromosomes but does not affect their transcription and replication timing.

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