The Rice PIPELINE: a unification tool for plant functional genomics

scientific article

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The Rice PIPELINE: a unification tool for plant functional genomics is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/nar/YazakiKSKK04
P356DOI10.1093/NAR/GKH001
P932PMC publication ID308736
P698PubMed publication ID14681439
P5875ResearchGate publication ID8955025

P2093author name stringShoshi Kikuchi
Naoki Kishimoto
Keiichi Kojima
Junshi Yazaki
Kouji Suzuki
P2860cites workWormBase: a cross-species database for comparative genomicsQ35158576
Large-scale EST sequencing in riceQ36881909
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica riceQ42603925
cDNA microarray analysis of gene expression during Fe-deficiency stress in barley suggests that polar transport of vesicles is implicated in phytosiderophore secretion in Fe-deficient barley rootsQ43967578
The genome sequence and structure of rice chromosome 1.Q48272325
Sequence and analysis of rice chromosome 4.Q52945943
Embarking on rice functional genomics via cDNA microarray: use of 3' UTR probes for specific gene expression analysisQ73531094
A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)Q22065834
A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)Q22065835
Rice gibberellin-insensitive dwarf mutant gene Dwarf 1 encodes the alpha-subunit of GTP-binding proteinQ24679597
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAsQ28131821
Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel ostatc geneQ28359930
INE: a rice genome database with an integrated map viewQ30825757
A large scale analysis of cDNA in Arabidopsis thaliana: generation of 12,028 non-redundant expressed sequence tags from normalized and size-selected cDNA librariesQ30887231
A comprehensive rice transcript map containing 6591 expressed sequence tag sitesQ31044528
Functional annotation of a full-length Arabidopsis cDNA collectionQ31044563
A High-Density Rice Genetic Linkage Map with 2275 Markers Using a Single F2 PopulationQ32113249
Genetic and molecular dissection of naturally occurring variationQ34168024
Plant cis-acting regulatory DNA elements (PLACE) database: 1999Q34691479
P433issueDatabase issue
P407language of work or nameEnglishQ1860
P921main subjectgenomicsQ222046
functional genomicsQ1068690
P304page(s)D383-7
P577publication date2004-01-01
P1433published inNucleic Acids ResearchQ135122
P1476titleThe Rice PIPELINE: a unification tool for plant functional genomics
P478volume32

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cites work (P2860)
Q43300265BRASSINOSTEROID UPREGULATED1, encoding a helix-loop-helix protein, is a novel gene involved in brassinosteroid signaling and controls bending of the lamina joint in rice
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Q37170844Comparative analysis of the small heat shock proteins in three angiosperm genomes identifies new subfamilies and reveals diverse evolutionary patterns
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Q33324165Generation of a 3D indexed Petunia insertion database for reverse genetics
Q42022134Genome-wide introgression lines and their use in genetic and molecular dissection of complex phenotypes in rice (Oryza sativa L.).
Q39396509Identification of Fe-excess-induced genes in rice shoots reveals a WRKY transcription factor responsive to Fe, drought and senescence
Q33495608Identification of up-regulated genes in flag leaves during rice grain filling and characterization of OsNAC5, a new ABA-dependent transcription factor
Q28661778Increase in cellulose accumulation and improvement of saccharification by overexpression of arabinofuranosidase in rice
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Q37280361Literature mining in support of drug discovery
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Q50128598Munich information center for protein sequences plant genome resources: a framework for integrative and comparative analyses 1(W).
Q48378161On the hierarchical classification of G protein-coupled receptors
Q35036831Plasmodesmal receptor-like kinases identified through analysis of rice cell wall extracted proteins
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Q36402764The genomic view of genes responsive to the antagonistic phytohormones, abscisic acid, and gibberellin
Q46381955Transcriptome Profiling Analysis Using Rice Oligonucleotide Microarrays
Q38519423Transcriptome analysis of salinity stress responses in common wheat using a 22k oligo-DNA microarray

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