GenDecoder: genetic code prediction for metazoan mitochondria

scientific article

GenDecoder: genetic code prediction for metazoan mitochondria is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/nar/AbascalZP06
P356DOI10.1093/NAR/GKL044
P932PMC publication ID1538875
P698PubMed publication ID16845034
P5875ResearchGate publication ID6940852

P50authorDavid PosadaQ30512250
Rafael ZardoyaQ37384424
P2093author name stringFederico Abascal
P2860cites workParallel evolution of the genetic code in arthropod mitochondrial genomes.Q21146058
Rewiring the keyboard: evolvability of the genetic codeQ22122388
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceQ24286950
The Bioperl toolkit: Perl modules for the life sciencesQ24682183
The Jalview Java alignment editorQ27861026
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzeesQ27861060
GenBank: updateQ29615400
Changes in mitochondrial genetic codes as phylogenetic characters: two examples from the flatwormsQ30658233
A different genetic code in human mitochondriaQ34280642
The mitochondrial genome of the sea anemone Metridium senile (Cnidaria): introns, a paucity of tRNA genes, and a near-standard genetic code.Q34603529
Scoring residue conservationQ34733455
Recovering evolutionary trees under a more realistic model of sequence evolutionQ34977609
The origin of the genetic code: theories and their relationships, a reviewQ36095059
First sequenced mitochondrial genome from the phylum Acanthocephala (Leptorhynchoides thecatus) and its phylogenetic position within Metazoa.Q42657337
How Mitochondria Redefine the CodeQ56999492
Position-based sequence weightsQ72819629
P433issueWeb Server issue
P407language of work or nameEnglishQ1860
P921main subjectmitochondrionQ39572
P304page(s)W389-93
P577publication date2006-07-01
P1433published inNucleic Acids ResearchQ135122
P1476titleGenDecoder: genetic code prediction for metazoan mitochondria
P478volume34

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cites work (P2860)
Q28757558A thirty million year-old inherited heteroplasmy
Q33506537A unique genetic code change in the mitochondrial genome of the parasitic nematode Radopholus similis
Q56878335Automatic Prediction of the Genetic Code
Q92719167Coding palindromes in mitochondrial genes of Nematomorpha
Q35200209Comparative mitogenomics of plant bugs (Hemiptera: Miridae): identifying the AGG codon reassignments between serine and lysine
Q38430231CoreTracker: accurate codon reassignment prediction, applied to mitochondrial genomes
Q36023240Cytonuclear Interactions in the Evolution of Animal Mitochondrial tRNA Metabolism
Q35582295Evolutionary analysis of mitogenomes from parasitic and free-living flatworms
Q55262289Extensive mitochondrial gene rearrangements in Ctenophora: insights from benthic Platyctenida.
Q24598011FACIL: Fast and Accurate Genetic Code Inference and Logo
Q34034694Mitochondrial DNA of Clathrina clathrus (Calcarea, Calcinea): six linear chromosomes, fragmented rRNAs, tRNA editing, and a novel genetic code.
Q28597273Mitochondrial Genomes of Kinorhyncha: trnM Duplication and New Gene Orders within Animals
Q60949421Mitogenomics Reveals a Novel Genetic Code in Hemichordata
Q64916718Rapid Genetic Code Evolution in Green Algal Mitochondrial Genomes.
Q57258723Synthetic Genetic Codes as the Basis of Synthetic Life
Q24607940The enigmatic mitochondrial genome of Rhabdopleura compacta (Pterobranchia) reveals insights into selection of an efficient tRNA system and supports monophyly of Ambulacraria
Q34187450The evolution of the mitochondrial genetic code in arthropods revisited
Q34008832The mitochondrial DNA of Xenoturbella bocki: genomic architecture and phylogenetic analysis
Q33898398The mitochondrial genome of the ascalaphid owlfly Libelloides macaronius and comparative evolutionary mitochondriomics of neuropterid insects.

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