HIV-1 modulates the tRNA pool to improve translation efficiency

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HIV-1 modulates the tRNA pool to improve translation efficiency is …
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scholarly articleQ13442814

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P356DOI10.1093/MOLBEV/MSR005
P724Internet Archive IDpubmed-PMC3098512
P932PMC publication ID3098512
P698PubMed publication ID21216840
P5875ResearchGate publication ID49738889

P50authorManon Ragonnet-CroninQ56842456
Erinija PranckevicieneQ58210255
Lawrence KleimanQ39700268
Xuhua XiaQ46395189
P2093author name stringAnna van Weringh
Mariana Pavon-Eternod
P2860cites workCodon and amino acid usage in retroviral genomes is consistent with virus-specific nucleotide pressureQ24498128
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Codon usage tabulated from international DNA sequence databases: status for the year 2000Q24498251
The tendency of lentiviral open reading frames to become A-rich: constraints imposed by viral genome organization and cellular tRNA availabilityQ24498471
The extent of codon usage bias in human RNA viruses and its evolutionary originQ24498571
Codon usage limitation in the expression of HIV-1 envelope glycoproteinQ24498729
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The interaction between HIV-1 Gag and human lysyl-tRNA synthetase during viral assemblyQ28205104
The selective packaging and annealing of primer tRNALys3 in HIV-1Q28255952
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The tRNALys packaging complex in HIV-1Q28265494
Functional replacement of the HIV-1 rev protein by the HTLV-1 rex protein.Q55242417
Unusual codon usage of HIVQ59098991
Sequences within Pr160gag-pol affecting the selective packaging of primer tRNA(Lys3) into HIV-1Q73910219
APOBEC3B and APOBEC3C are potent inhibitors of simian immunodeficiency virus replicationQ28286241
Role of Pr160gag-pol in mediating the selective incorporation of tRNA(Lys) into human immunodeficiency virus type 1 particlesQ28646824
Identification of tRNAs incorporated into wild-type and mutant human immunodeficiency virus type 1Q28646853
Maximizing transcription efficiency causes codon usage biasQ28769433
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Quantitative effect of suboptimal codon usage on translational efficiency of mRNA encoding HIV-1 gag in intact T cellsQ33340267
The SARS Coronavirus 3a protein causes endoplasmic reticulum stress and induces ligand-independent downregulation of the type 1 interferon receptorQ33519556
tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genesQ33945645
Characterization of the alpha interferon-induced postentry block to HIV-1 infection in primary human macrophages and T cellsQ34120302
Discovery of HTLV-1, the first human retrovirus, its unique regulatory mechanisms, and insights into pathogenesisQ34450086
Orchestrating the unfolded protein response in health and diseaseQ35001604
Cellular distribution of Lysyl-tRNA synthetase and its interaction with Gag during human immunodeficiency virus type 1 assemblyQ35123403
Hypermutagenesis of RNA using human immunodeficiency virus type 1 reverse transcriptase and biased dNTP concentrationsQ35938679
CORRELATION BETWEEN BASE COMPOSITION OF DEOXYRIBONUCLEIC ACID AND AMINO ACID COMPOSITION OF PROTEIN.Q36439662
Retrovirus translation initiation: Issues and hypotheses derived from study of HIV-1Q36447124
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High viral load in lymph nodes and latent human immunodeficiency virus (HIV) in peripheral blood cells of HIV-1-infected chimpanzees.Q36655355
Regulation of HIV‐1 gene expressionQ36661744
The A-rich RNA sequences of HIV-1 pol are important for the synthesis of viral cDNA.Q37108399
Phosphorylation of eukaryotic translation initiation factor 2alpha coordinates rRNA transcription and translation inhibition during endoplasmic reticulum stressQ37275199
Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferencesQ37425283
Formation of the tRNALys packaging complex in HIV-1.Q37633035
Effects of hepatitis C virus envelope glycoprotein unfolded protein response activation on translation and transcription.Q39797992
tRNAs as primer of reverse transcriptasesQ40402097
GtRNAdb: a database of transfer RNA genes detected in genomic sequenceQ41789848
Coxsackievirus B3 infection activates the unfolded protein response and induces apoptosis through downregulation of p58IPK and activation of CHOP and SREBP1.Q41847508
An improved implementation of codon adaptation indexQ41922658
The low evolutionary rate of human T-cell lymphotropic virus type-1 confirmed by analysis of vertical transmission chains.Q42617889
Profiling non-lysyl tRNAs in HIV-1.Q42930396
Coevolution of codon usage and transfer RNA abundanceQ43851327
Sustained G-->A hypermutation during reverse transcription of an entire human immunodeficiency virus type 1 strain Vau group O genomeQ45733232
What can AIDS virus codon usage tell us?Q45830236
A large variation in the rates of synonymous substitution for RNA viruses and its relationship to a diversity of viral infection and transmission modesQ47968450
P275copyright licenseCreative Commons Attribution-NonCommercial 2.5 GenericQ19113746
P6216copyright statuscopyrightedQ50423863
P433issue6
P407language of work or nameEnglishQ1860
P304page(s)1827-1834
P577publication date2011-01-07
P1433published inMolecular Biology and EvolutionQ1992656
P1476titleHIV-1 modulates the tRNA pool to improve translation efficiency
P478volume28