Inflammation-sensitive super enhancers form domains of coordinately regulated enhancer RNAs

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Inflammation-sensitive super enhancers form domains of coordinately regulated enhancer RNAs is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2015PNAS..112E.297H
P356DOI10.1073/PNAS.1424028112
P932PMC publication ID4311831
P698PubMed publication ID25564661
P5875ResearchGate publication ID270661295

P50authorRonald M. EvansQ969420
P2093author name stringRuth T Yu
Michael Downes
Nasun Hah
Chris Benner
Ling-Wa Chong
P2860cites workHighly conserved non-coding sequences are associated with vertebrate developmentQ21092819
A large fraction of extragenic RNA pol II transcription sites overlap enhancersQ21145794
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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identitiesQ24617969
Histone H3K27ac separates active from poised enhancers and predicts developmental stateQ24628758
The Mediator complex: a master coordinator of transcription and cell lineage developmentQ26859539
Enhancer RNAs and regulated transcriptional programsQ26865277
Fast gapped-read alignment with Bowtie 2Q27860699
Topological domains in mammalian genomes identified by analysis of chromatin interactionsQ28264221
Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promotersQ28302903
Super-enhancers in the control of cell identity and diseaseQ28661442
A long noncoding RNA maintains active chromatin to coordinate homeotic gene expressionQ29614326
A unique chromatin signature uncovers early developmental enhancers in humansQ29614327
Widespread transcription at neuronal activity-regulated enhancersQ29614330
Master transcription factors and mediator establish super-enhancers at key cell identity genesQ29618062
Anti-diabetic rosiglitazone remodels the adipocyte transcriptome by redistributing transcription to PPARγ-driven enhancersQ33600223
Discovery and characterization of super-enhancer-associated dependencies in diffuse large B cell lymphoma.Q33601156
Enhancer RNAs participate in androgen receptor-driven looping that selectively enhances gene activationQ33665345
lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs.Q33666551
Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytesQ33770661
The active enhancer network operated by liganded RXR supports angiogenic activity in macrophages.Q33917441
Enhancer function: new insights into the regulation of tissue-specific gene expressionQ34025898
Transcriptional regulation and its misregulation in disease.Q34036033
Transient estrogen receptor binding and p300 redistribution support a squelching mechanism for estradiol-repressed genesQ34131693
Reprogramming transcription by distinct classes of enhancers functionally defined by eRNAQ34185076
Noncoding transcription at enhancers: general principles and functional modelsQ34294940
eRNAs are required for p53-dependent enhancer activity and gene transcriptionQ34319965
Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activationQ34348069
Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variantsQ34377776
Transcription factor cooperativity in early adipogenic hotspots and super-enhancers.Q34421229
Long non-coding RNAs and enhancersQ34627040
Epigenetic signatures distinguish multiple classes of enhancers with distinct cellular functionsQ35145499
Functional and mechanistic diversity of distal transcription enhancersQ37091409
Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription.Q37340291
The emerging roles of eRNAs in transcriptional regulatory networks.Q37681034
Selective transcription in response to an inflammatory stimulusQ37715321
Enhancer RNAs: the new molecules of transcriptionQ38183529
A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cellsQ39546838
Bcl-6 and NF-kappaB cistromes mediate opposing regulation of the innate immune response.Q41193370
NF-κB directs dynamic super enhancer formation in inflammation and atherogenesisQ41971115
Enhancer transcripts mark active estrogen receptor binding sitesQ42597586
Remodeling of the enhancer landscape during macrophage activation is coupled to enhancer transcription.Q42972194
Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.Q43141233
NF-κB is 25.Q46097461
Seq-ing LPS-induced enhancersQ46153218
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectinflammationQ101991
P304page(s)E297-302
P577publication date2015-01-06
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleInflammation-sensitive super enhancers form domains of coordinately regulated enhancer RNAs
P478volume112

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