| scholarly article | Q13442814 |
| P819 | ADS bibcode | 2013PLoSO...878237A |
| P356 | DOI | 10.1371/JOURNAL.PONE.0078237 |
| P932 | PMC publication ID | 3826726 |
| P698 | PubMed publication ID | 24250794 |
| P5875 | ResearchGate publication ID | 258704154 |
| P50 | author | Jillian Banfield | Q6193127 |
| Douglas E. Rawlings | Q59187857 | ||
| Juan Pablo Cárdenas | Q84707956 | ||
| Mark Dopson | Q89274023 | ||
| David S Holmes | Q103777292 | ||
| Raquel Quatrini | Q30510942 | ||
| P2093 | author name string | Gonzalo Riadi | |
| Paulo C Covarrubias | |||
| Rodrigo Flores | |||
| Jorge Valdés | |||
| Lillian G Acuña | |||
| Amir Shmaryahu | |||
| Harold Nuñez | |||
| Juan José Haristoy | |||
| P2860 | cites work | Class II broad-spectrum mercury resistance transposons in Gram-positive bacteria from natural environments | Q48354500 |
| Sulfur metabolism in the extreme acidophile acidithiobacillus caldus | Q21131152 | ||
| Acidithiobacillus caldus sulfur oxidation model based on transcriptome analysis between the wild type and sulfur oxygenase reductase defective mutant | Q21134512 | ||
| The RAST Server: rapid annotations using subsystems technology | Q21263157 | ||
| Gene ontology: tool for the unification of biology | Q23781406 | ||
| tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence | Q24544402 | ||
| Gapped BLAST and PSI-BLAST: a new generation of protein database search programs | Q24545170 | ||
| The CGView Server: a comparative genomics tool for circular genomes | Q24646287 | ||
| Identifying bacterial genes and endosymbiont DNA with Glimmer | Q24653724 | ||
| A new look at bacteriophage lambda genetic networks | Q24675977 | ||
| Evidence of a large novel gene pool associated with prokaryotic genomic islands | Q24810754 | ||
| The PROSITE database. | Q25257913 | ||
| CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats | Q27496515 | ||
| The COG database: a tool for genome-scale analysis of protein functions and evolution | Q27936664 | ||
| A systematic method to identify genomic islands and its applications in analyzing the genomes of Corynebacterium glutamicum and Vibrio vulnificus CMCP6 chromosome I | Q28251660 | ||
| Horizontal transfer of nonconjugative plasmids in a colony biofilm of Escherichia coli. | Q51282246 | ||
| Explaining microbial population genomics through phage predation. | Q51647339 | ||
| Using MUMmer to identify similar regions in large sequence sets. | Q51888028 | ||
| The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes. | Q52422256 | ||
| Comparative analysis of CRISPR loci in lactic acid bacteria genomes. | Q52422277 | ||
| CRISPR elements in the Thermococcales: evidence for associated horizontal gene transfer in Pyrococcus furiosus. | Q52422303 | ||
| CRISPR/Cas and Cmr modules, mobility and evolution of adaptive immune systems. | Q52422353 | ||
| Bacillus subtilis CtaA and CtaB function in haem A biosynthesis. | Q54650776 | ||
| Pre-exposure to UV irradiation increases the transfer frequency of the IncJ conjugative transposon-like elements R391, R392, R705, R706, R997 and pMERPH and is recA+ dependent. | Q54682629 | ||
| Effects of ferrous sulfate, inoculum history, and anionic form on lead, zinc, and copper toxicity to Acidithiobacillus caldus strain BC13 | Q59943489 | ||
| Transposition of IST2 in Thiobacillus ferrooxidans | Q72123637 | ||
| Characteristics of attachment and growth of Thiobacillus caldus on sulphide minerals: a chemotactic response to sulphur minerals? | Q73493170 | ||
| The involvement of NAD(P)H dehydrogenase subunits, NdhD3 and NdhF3, in high-affinity CO2 uptake in Synechococcus sp. PCC7002 gives evidence for multiple NDH-1 complexes with specific roles in cyanobacteria | Q77928087 | ||
| Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter | Q44003822 | ||
| Genomic and phenotypic heterogeneity of Acidithiobacillus spp. strains isolated from diverse habitats in China | Q44267423 | ||
| Unraveling the Acidithiobacillus caldus complete genome and its central metabolisms for carbon assimilation. | Q45899193 | ||
| The novel virulence-related gene nlxA in the lipopolysaccharide cluster of Xanthomonas citri ssp. citri is involved in the production of lipopolysaccharide and extracellular polysaccharide, motility, biofilm formation and stress resistance | Q46124987 | ||
| TnpPred: A Web Service for the Robust Prediction of Prokaryotic Transposases | Q28710519 | ||
| CRISPR/cas loci of type II Propionibacterium acnes confer immunity against acquisition of mobile elements present in type I P. acnes | Q28730827 | ||
| Regulation of a Bacillus subtilis mobile genetic element by intercellular signaling and the global DNA damage response | Q28769513 | ||
| Mauve: multiple alignment of conserved genomic sequence with rearrangements | Q29547292 | ||
| CRITICA: coding region identification tool invoking comparative analysis | Q29614364 | ||
| Prokaryotic toxin-antitoxin stress response loci | Q29615335 | ||
| ACT: the Artemis Comparison Tool | Q29616601 | ||
| Ribonucleotide reductases | Q29620027 | ||
| Viewing and editing assembled sequences using Consed | Q29950572 | ||
| The colicin Ia receptor, Cir, is also the translocator for colicin Ia. | Q30157053 | ||
| Gas channels for NH(3): proteins from hyperthermophiles complement an Escherichia coli mutant | Q30453254 | ||
| Acidithiobacillus ferridurans sp. nov., an acidophilic iron-, sulfur- and hydrogen-metabolizing chemolithotrophic gammaproteobacterium | Q30633696 | ||
| The association of virulence factors with genomic islands | Q30942143 | ||
| The microbiology of biomining: development and optimization of mineral-oxidizing microbial consortia | Q33270642 | ||
| Microbial iron management mechanisms in extremely acidic environments: comparative genomics evidence for diversity and versatility | Q33386252 | ||
| Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications | Q33392439 | ||
| A novel endo-hydrogenase activity recycles hydrogen produced by nitrogen fixation | Q33416757 | ||
| A toxin-antitoxin system promotes the maintenance of an integrative conjugative element | Q33422974 | ||
| Selection and evaluation of reference genes for improved interrogation of microbial transcriptomes: case study with the extremophile Acidithiobacillus ferrooxidans | Q33474603 | ||
| Draft genome sequence of the extremely acidophilic bacterium Acidithiobacillus caldus ATCC 51756 reveals metabolic versatility in the genus Acidithiobacillus | Q33484077 | ||
| Acidithiobacillus ferrivorans, sp. nov.; facultatively anaerobic, psychrotolerant iron-, and sulfur-oxidizing acidophiles isolated from metal mine-impacted environments. | Q33507311 | ||
| Deciphering chemotaxis pathways using cross species comparisons | Q33523188 | ||
| MicrobesOnline: an integrated portal for comparative and functional genomics | Q33600574 | ||
| Properties of a copper-containing cytochrome ba3: a second terminal oxidase from the extreme thermophile Thermus thermophilus | Q33637933 | ||
| Genome comparison and context analysis reveals putative mobile forms of restriction-modification systems and related rearrangements | Q33783220 | ||
| Characterization of phenotypic changes in Pseudomonas putida in response to surface-associated growth | Q33996997 | ||
| CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats | Q34004457 | ||
| CRISPI: a CRISPR interactive database | Q34019852 | ||
| SOS response promotes horizontal dissemination of antibiotic resistance genes | Q34285480 | ||
| Characterization of Thiobacillus caldus sp. nov., a moderately thermophilic acidophile | Q34293418 | ||
| Patterns and architecture of genomic islands in marine bacteria | Q34354634 | ||
| Phase variable O antigen biosynthetic genes control expression of the major protective antigen and bacteriophage receptor in Vibrio cholerae O1 | Q34426457 | ||
| Type II restriction endonucleases: structure and mechanism | Q34555997 | ||
| A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes | Q34580339 | ||
| Regulation of flagellar assembly | Q34588853 | ||
| FepA- and TonB-dependent bacteriophage H8: receptor binding and genomic sequence | Q34631733 | ||
| Regulation of a novel Acidithiobacillus caldus gene cluster involved in metabolism of reduced inorganic sulfur compounds | Q34688171 | ||
| Occurrence, classification, and biological function of hydrogenases: an overview. | Q34699989 | ||
| InterPro and InterProScan: tools for protein sequence classification and comparison | Q34715447 | ||
| The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates | Q34803749 | ||
| Growth in sulfidic mineral environments: metal resistance mechanisms in acidophilic micro-organisms | Q35194636 | ||
| Porphyromonas gingivalis galE is involved in lipopolysaccharide O-antigen synthesis and biofilm formation | Q35217619 | ||
| Interstrain transfer of the large pathogenicity island (PAPI-1) of Pseudomonas aeruginosa | Q35544327 | ||
| The phn Island: A New Genomic Island Encoding Catabolism of Polynuclear Aromatic Hydrocarbons | Q35866984 | ||
| Pseudomonas putida Strains Which Constitutively Overexpress Mercury Resistance for Biodetoxification of Organomercurial Pollutants. | Q36051030 | ||
| The evolution of pTF-FC2 and pTC-F14, two related plasmids of the IncQ-family. | Q36057474 | ||
| Genomes of surface isolates of Alteromonas macleodii: the life of a widespread marine opportunistic copiotroph | Q36279581 | ||
| Presence of a family of plasmids (29 to 65 kilobases) with a 26-kilobase common region in different strains of the sulfur-oxidizing bacterium Acidithiobacillus caldus | Q36804159 | ||
| Carbonic anhydrases--an overview | Q37108500 | ||
| Is the pan-genome also a pan-selectome? | Q37195740 | ||
| Cytoplasmic pH measurement and homeostasis in bacteria and archaea | Q37539166 | ||
| The KdpFABC complex from Escherichia coli: a chimeric K+ transporter merging ion pumps with ion channels | Q37891528 | ||
| Quorum sensing and bacterial social interactions in biofilms | Q38021990 | ||
| Molecular genetic and protein chemical characterization of the cytochrome ba3 from Thermus thermophilus HB8. | Q38292043 | ||
| Potential role of thiobacillus caldus in arsenopyrite bioleaching | Q39479843 | ||
| Characterization of Vibrio cholerae O1 El tor galU and galE mutants: influence on lipopolysaccharide structure, colonization, and biofilm formation | Q39517916 | ||
| An unusual Tn21-like transposon containing an ars operon is present in highly arsenic-resistant strains of the biomining bacterium Acidithiobacillus caldus. | Q39536998 | ||
| Genes required for plasmid R64 thin-pilus biogenesis: identification and localization of products of the pilK, pilM, pilO, pilP, pilR, and pilT genes | Q39694629 | ||
| Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon | Q41484647 | ||
| Complete genome sequence of temperate bacteriophage AcaML1 from the extreme acidophile Acidithiobacillus caldus ATCC 51756 | Q41574244 | ||
| Derepression of excision of integrative and potentially conjugative elements from Streptococcus thermophilus by DNA damage response: implication of a cI-related repressor | Q41783033 | ||
| Haem O can replace haem A in the active site of cytochromecoxidase from thermophilic bacterium PS3 | Q41837362 | ||
| Mycobacterial Biofilms Facilitate Horizontal DNA Transfer between Strains ofMycobacterium smegmatis | Q41864608 | ||
| The ability of flagellum-specific Proteus vulgaris bacteriophage PV22 to interact with Campylobacter jejuni flagella in culture | Q42134551 | ||
| Cloning and characterization of the chromosomal arsenic resistance genes from Acidithiobacillus caldus and enhanced arsenic resistance on conjugal transfer of ars genes located on transposon TnAtcArs | Q42605814 | ||
| The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar-contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer | Q42621657 | ||
| A 12-cistron Escherichia coli operon (hyf) encoding a putative proton-translocating formate hydrogenlyase system | Q42668439 | ||
| ICE Afe 1, an actively excising genetic element from the biomining bacterium Acidithiobacillus ferrooxidans. | Q42691621 | ||
| Metabolic changes of Acidithiobacillus caldus under Cu²(+) stress | Q42820487 | ||
| Localization, purification and properties of a tetrathionate hydrolase from Acidithiobacillus caldus | Q43014643 | ||
| A new type of NADH dehydrogenase specific for nitrate respiration in the extreme thermophile Thermus thermophilus | Q43016188 | ||
| Extreme zinc tolerance in acidophilic microorganisms from the bacterial and archaeal domains. | Q43016962 | ||
| Construction of conjugative gene transfer system between E. coli and moderately thermophilic, extremely acidophilic Acidithiobacillus caldus MTH-04. | Q43023747 | ||
| Chromosomally encoded arsenical resistance of the moderately thermophilic acidophile Acidithiobacillus caldus | Q43029208 | ||
| ATP generation during reduced inorganic sulfur compound oxidation by Acidithiobacillus caldus is exclusively due to electron transport phosphorylation | Q43030379 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P4510 | describes a project that uses | MUMmer | Q6719063 |
| P433 | issue | 11 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Acidithiobacillus caldus | Q18350075 |
| P304 | page(s) | e78237 | |
| P577 | publication date | 2013-11-08 | |
| P1433 | published in | PLOS One | Q564954 |
| P1476 | title | Architecture and gene repertoire of the flexible genome of the extreme acidophile Acidithiobacillus caldus | |
| P478 | volume | 8 |
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| Q37532855 | Bioinformatic Analyses of Unique (Orphan) Core Genes of the Genus Acidithiobacillus: Functional Inferences and Use As Molecular Probes for Genomic and Metagenomic/Transcriptomic Interrogation |
| Q53685417 | Codon usage bias reveals genomic adaptations to environmental conditions in an acidophilic consortium. |
| Q33639521 | Comparative Genomics Unravels the Functional Roles of Co-occurring Acidophilic Bacteria in Bioleaching Heaps |
| Q28828755 | Comparative Genomics of the Extreme Acidophile Acidithiobacillus thiooxidans Reveals Intraspecific Divergence and Niche Adaptation |
| Q58546778 | Comparative genomics of the Komagataeibacter strains-Efficient bionanocellulose producers |
| Q43185517 | Correction: Architecture and gene repertoire of the flexible genome of the extreme acidophile Acidithiobacillus caldus |
| Q46236995 | Draft genome sequence of the type strain of the sulfur-oxidizing acidophile, Acidithiobacillus albertensis (DSM 14366). |
| Q46335943 | Functionality of tRNAs encoded in a mobile genetic element from an acidophilic bacterium |
| Q36052601 | Gene Loss and Horizontal Gene Transfer Contributed to the Genome Evolution of the Extreme Acidophile "Ferrovum". |
| Q37475453 | Gene Turnover Contributes to the Evolutionary Adaptation of Acidithiobacillus caldus: Insights from Comparative Genomics |
| Q58459075 | Involvement of β-Carbonic Anhydrase Genes in Bacterial Genomic Islands and Their Horizontal Transfer to Protists |
| Q38237975 | Metal resistance in acidophilic microorganisms and its significance for biotechnologies |
| Q28818820 | Molecular Systematics of the Genus Acidithiobacillus: Insights into the Phylogenetic Structure and Diversification of the Taxon |
| Q64120783 | Nucleotide Second Messenger-Based Signaling in Extreme Acidophiles of the Species Complex: Partition Between the Core and Variable Gene Complements |
| Q52595188 | Pan-Genome Analysis Links the Hereditary Variation of Leptospirillum ferriphilum With Its Evolutionary Adaptation. |
| Q64898162 | Phylogeny, Divergent Evolution, and Speciation of Sulfur-Oxidizing Acidithiobacillus Populations. |
| Q60919982 | Sequence analysis and confirmation of the type IV pili-associated proteins PilY1, PilW and PilV in Acidithiobacillus thiooxidans |
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