| review article | Q7318358 |
| scholarly article | Q13442814 |
| P356 | DOI | 10.1016/S0301-4622(02)00293-4 |
| P8608 | Fatcat ID | release_pu7cpj7qdnhsxp6kpwwoz26tz4 |
| P698 | PubMed publication ID | 12646378 |
| P50 | author | Martin Karplus | Q903471 |
| P2093 | author name string | Themis Lazaridis | |
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| Contribution of the hydrophobic effect to protein stability: analysis based on simulations of the Ile-96----Ala mutation in barnase | Q37637250 | ||
| Electrostatic interactions in macromolecules: theory and applications | Q37938174 | ||
| Experimental and Theoretical Aspects of Protein Folding | Q38112424 | ||
| Free energy via molecular simulation: applications to chemical and biomolecular systems | Q38648060 | ||
| Excluded volume approximation to protein-solvent interaction. The solvent contact model | Q39628335 | ||
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| Kinetics versus thermodynamics in protein folding | Q40661337 | ||
| Aspects of protein energetics and dynamics | Q40840878 | ||
| Additivity principles in biochemistry | Q41313884 | ||
| Modeling the effects of mutations on the denatured states of proteins | Q42024876 | ||
| THE EQUILIBRIUM BETWEEN ACTIVE NATIVE TRYPSIN AND INACTIVE DENATURED TRYPSIN. | Q42839960 | ||
| Energetics of complementary side-chain packing in a protein hydrophobic core | Q43985354 | ||
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| Simulations of the structural and dynamical properties of denatured proteins: the "molten coil" state of bovine pancreatic trypsin inhibitor | Q47625640 | ||
| Molecular recognition in proteins. Simulation analysis of substrate binding by a tyrosyl-tRNA synthetase mutant. | Q50150501 | ||
| Decomposition of interaction free energies in proteins and other complex systems. | Q52323588 | ||
| "New view" of protein folding reconciled with the old through multiple unfolding simulations. | Q52528318 | ||
| Use of binding energy in catalysis analyzed by mutagenesis of the tyrosyl-tRNA synthetase. | Q52642673 | ||
| CHARMM: A program for macromolecular energy, minimization, and dynamics calculations | Q53340989 | ||
| The meaning of component analysis: decomposition of the free energy in terms of specific interactions. | Q53633827 | ||
| Semianalytical treatment of solvation for molecular mechanics and dynamics | Q56866446 | ||
| Metastable states and folding free energy barriers | Q56999466 | ||
| Thermodynamics of protein-peptide interactions in the ribonuclease-S system studied by molecular dynamics and free energy calculations | Q57000524 | ||
| Decomposition of the Free Energy of a System in Terms of Specific Interactions | Q57204738 | ||
| An Efficient Mean Solvation Force Model for Use in Molecular Dynamics Simulations of Proteins in Aqueous Solution | Q57950560 | ||
| Stereochemistry of Cooperative Effects in Haemoglobin: Haem–Haem Interaction and the Problem of Allostery | Q59054576 | ||
| Studies on Denaturation of Proteins XIII. A Theory of Denaturation† | Q59509108 | ||
| Contribution of hydrogen bonding to the conformational stability of ribonuclease T1 | Q67731991 | ||
| Protein hydration in aqueous solution | Q68053669 | ||
| Relationships between apparent binding energies measured in site-directed mutagenesis experiments and energetics of binding and catalysis | Q68343033 | ||
| Heat capacity of proteins. I. Partial molar heat capacity of individual amino acid residues in aqueous solution: hydration effect | Q68790242 | ||
| A mathematical model for structure-function relations in hemoglobin | Q69405790 | ||
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| The heat capacity of proteins | Q71537055 | ||
| Acid and thermal denaturation of barnase investigated by molecular dynamics simulations | Q71751634 | ||
| On the decomposition of free energies | Q71768484 | ||
| Modeling compact denatured states of proteins | Q72453389 | ||
| Circular dichroism of denatured barstar suggests residual structure, | Q73561300 | ||
| A metastable state in folding simulations of a protein model | Q74313144 | ||
| P433 | issue | 1-3 | |
| P921 | main subject | thermodynamics | Q11473 |
| protein folding | Q847556 | ||
| P304 | page(s) | 367-395 | |
| P577 | publication date | 2003-01-01 | |
| P1433 | published in | Biophysical Chemistry | Q15760978 |
| P1476 | title | Thermodynamics of protein folding: a microscopic view | |
| P478 | volume | 100 |
| Q30343994 | A flexible approach for understanding protein stability. |
| Q90643615 | A protein interaction free energy model based on amino acid residue contributions: Assessment of point mutation stability of T4 lysozyme |
| Q30371132 | Amino acid distribution rules predict protein fold: protein grammar for beta-strand sandwich-like structures |
| Q51896516 | An integral equation theory for inhomogeneous molecular fluids: the reference interaction site model approach. |
| Q38071408 | Approaches to efficiently estimate solvation and explicit water energetics in ligand binding: the use of WaterMap |
| Q41839089 | CXC and CC chemokines form mixed heterodimers: association free energies from molecular dynamics simulations and experimental correlations |
| Q27330867 | Conserved quantitative stability/flexibility relationships (QSFR) in an orthologous RNase H pair |
| Q37091967 | Dependence of interaction free energy between solutes on an external electrostatic field |
| Q42701435 | Drug-Like Protein-Protein Interaction Modulators: Challenges and Opportunities for Drug Discovery and Chemical Biology |
| Q51868032 | Dynamics of alpha helix formation in the CSAW model. |
| Q54969157 | Examining a Thermodynamic Order Parameter of Protein Folding. |
| Q93089162 | Explicit Characterization of the Free Energy Landscape of pKID-KIX Coupled Folding and Binding |
| Q37855889 | Finding order within disorder: elucidating the structure of proteins associated with neurodegenerative disease |
| Q47567885 | Finding the needle in the haystack: towards solving the protein-folding problem computationally. |
| Q90781762 | Folding Free Energy Landscape of Ordered and Intrinsically Disordered Proteins |
| Q40795430 | Incorporating excluded solvent volume and physical dipoles for computing solvation free energy |
| Q51151014 | Incorporating the excluded solvent volume and surface charges for computing solvation free energy. |
| Q56903593 | Introduction to protein folding for physicists |
| Q30159951 | Local-structural diversity and protein folding: application to all-beta off-lattice protein models |
| Q36472758 | Molecular dynamics: survey of methods for simulating the activity of proteins |
| Q37088583 | NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers |
| Q28068775 | Protein stability: a crystallographer's perspective |
| Q30352261 | Protein structure evaluation using an all-atom energy based empirical scoring function. |
| Q28829212 | Proteomic indicators of oxidation and hydration state in colorectal cancer |
| Q33893521 | Relative Binding Enthalpies from Molecular Dynamics Simulations Using a Direct Method |
| Q35606668 | Sequence-specific solvent accessibilities of protein residues in unfolded protein ensembles. |
| Q30158026 | Stability of a protein tethered to a surface |
| Q34120049 | Thermodynamic analysis of water molecules at the surface of proteins and applications to binding site prediction and characterization |
| Q34984722 | Toward an accurate theoretical framework for describing ensembles for proteins under strongly denaturing conditions |
| Q37534252 | Ultrafast hydration dynamics in protein unfolding: human serum albumin |
| Q46783879 | Volumetric properties of the glycyl group of proteins in aqueous solution at high pressures |
| Q36715297 | Water at biomolecular binding interfaces |
| Q30393822 | Ways and means of coping with uncertainties of the relationship of the genetic blue print to protein structure and function in the cell |
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