Interactions of the RNA polymerase of bacteriophage T7 with its promoter during binding and initiation of transcription

scientific article published on June 1986

Interactions of the RNA polymerase of bacteriophage T7 with its promoter during binding and initiation of transcription is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode1986PNAS...83.3614I
P356DOI10.1073/PNAS.83.11.3614
P932PMC publication ID323573
P698PubMed publication ID3459146
P5875ResearchGate publication ID19697485

P2093author name stringC C Richardson
R A Ikeda
P2860cites workDNAase footprinting a simple method for the detection of protein-DNA binding specificityQ24615638
Complete nucleotide sequence of bacteriophage T7 DNA and the locations of T7 genetic elementsQ28275179
A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genesQ29547324
Initiation of DNA replication at the primary origin of bacteriophage T7 by purified proteins: requirement for T7 RNA polymeraseQ35395417
Methidiumpropyl-EDTA-Fe(II) and DNase I footprinting report different small molecule binding site sizes on DNAQ35685739
Promoter and nonspecific DNA binding by the T7 RNA polymeraseQ36095534
Cloning and expression of the gene for bacteriophage T7 RNA polymeraseQ36266166
Map of distamycin, netropsin, and actinomycin binding sites on heterogeneous DNA: DNA cleavage-inhibition patterns with methidiumpropyl-EDTA.Fe(II)Q36311672
The pathway of E. coli RNA polymerase-promoter complex formation as visualized by footprinting.Q40471491
T7 RNA polymerase: promoter structure and polymerase bindingQ41003389
Four T7 RNA polymerase promoters contain an identical 23 bp sequenceQ41674422
Kinetics of open complex formation between Escherichia coli RNA polymerase and the lac UV5 promoter. Evidence for a sequential mechanism involving three stepsQ42662435
Recognition and initiation site for four late promoters of phage T7 is a 22-base pair DNA sequenceQ47982277
Intermediates in transcription initiation from the E. coli lac UV5 promoterQ48373037
Nucleotide sequence of the gene for bacteriophage T7 RNA polymeraseQ48392427
Interpretation of monovalent and divalent cation effects on the lac repressor-operator interactionQ52805920
Characterization of T7-specific ribonucleic acid polymerase. 1. General properties of the enzymatic reaction and the template specificity of the enzyme.Q54138771
Interaction of RNA polymerase with lacUV5 promoter DNA during mRNA initiation and elongation. Footprinting, methylation, and rifampicin-sensitivity changes accompanying transcription initiation.Q54449961
New RNA Polymerase from Escherichia coli infected with Bacteriophage T7Q59052006
Cleavage of DNA with methidiumpropyl-EDTA-iron(II): reaction conditions and product analysesQ70500973
Promoter melting by T7 ribonucleic acid polymerase as detected by single-stranded endonuclease digestionQ72848531
Bacteriophage T7 DNA replication in vitro. Stimulation of DNA synthesis by T7 RNA polymeraseQ72859442
P433issue11
P407language of work or nameEnglishQ1860
P921main subjectbacteriophageQ165028
P304page(s)3614-3618
P577publication date1986-06-01
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleInteractions of the RNA polymerase of bacteriophage T7 with its promoter during binding and initiation of transcription
P478volume83

Reverse relations

cites work (P2860)
Q47742775A Mechanism for RecA-Promoted Sequence Homology Recognition and Strand Exchange Between Single-Stranded DNA and Duplex DNA, via Triple-Helical Intermediates
Q33770901A mutation in T7 RNA polymerase that facilitates promoter clearance
Q35867121Abortive initiation by bacteriophage T3 and T7 RNA polymerases under conditions of limiting substrate
Q67702502Abortive products as initiating nucleotides during transcription by T7 RNA polymerase
Q36109917Bacteriophage T7 RNA polymerase travels far ahead of ribosomes in vivo
Q36005550Bacteriophage T7 late promoters with point mutations: quantitative footprinting and in vivo expression
Q78290869Characterization of T7 RNA polymerase transcription complexes assembled on nucleic acid scaffolds
Q44300413Characterization of an unusual, sequence-specific termination signal for T7 RNA polymerase
Q35779519Characterization of elongating T7 and SP6 RNA polymerases and their response to a roadblock generated by a site-specific DNA binding protein
Q36182580Computer-Aided Design of RNA Origami Structures
Q34689847Construction of bacteriophage T7 late promoters with point mutations and characterization by in vitro transcription properties
Q83784847Control of enzyme reaction by a designed metal-ion-dependent α-helical coiled-coil protein
Q88727240Correlating Transcription Initiation and Conformational Changes by a Single-Subunit RNA Polymerase with Near Base-Pair Resolution
Q45013821Cross-linking of promoter DNA to T7 RNA polymerase does not prevent formation of a stable elongation complex
Q27729914Crystal structure of bacteriophage T7 RNA polymerase at 3.3 Å resolution
Q35600937Design, synthesis, and application of Spinach molecular beacons triggered by strand displacement.
Q42660541Differential scanning calorimetric approach to study the effect of melting region upon transcription initiation by T7 RNA polymerase and role of high affinity GTP binding
Q35173342Direct tests of the energetic basis of abortive cycling in transcription
Q36727773Displacement of Xenopus transcription factor IIIA from a 5S rRNA gene by a transcribing RNA polymerase
Q35665266Effects of saturation mutagenesis of the phage SP6 promoter on transcription activity, presented by activity logos
Q43647429Extended upstream A-T sequence increases T7 promoter strength
Q36129355Gene 5.5 protein of bacteriophage T7 inhibits the nucleoid protein H-NS of Escherichia coli
Q42634619Initial bubble collapse plays a key role in the transition to elongation in T7 RNA polymerase
Q67738058Initiation of transcription by T7 RNA polymerase as its natural promoters
Q33840780Insights into transcription: structure and function of single-subunit DNA-dependent RNA polymerases
Q36074967Interaction of psoralen-derivatized oligodeoxyribonucleoside methylphosphonates with synthetic DNA containing a promoter for T7 RNA polymerase
Q42277344Lighting up individual DNA binding proteins with quantum dots
Q74628096Major conformational changes occur during the transition from an initiation complex to an elongation complex by T7 RNA polymerase
Q54462885Mechanism of instability in abortive cycling by T7 RNA polymerase.
Q36668878Mechanism of promoter repression by Lac repressor-DNA loops
Q41093282Mitochondrial RNA polymerase of Saccharomyces cerevisiae: composition and mechanism of promoter recognition
Q40927779Mitochondrial transcription initiation: promoter structures and RNA polymerases
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Q43789249Promoter clearance by T7 RNA polymerase. Initial bubble collapse and transcript dissociation monitored by base analog fluorescence
Q35738777Promoter specificity determinants of T7 RNA polymerase
Q44413073Quantitative footprinting analysis of drug-DNA interactions: Fe(III) methidium-propyl-EDTA as a probe
Q40555929RNA polymerase induces DNA bending at yeast mitochondrial promoters
Q33564189Real-time observation of the transition from transcription initiation to elongation of the RNA polymerase
Q77746227Recent studies of T7 RNA polymerase mechanism
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Q33715519Sequential multiple functions of the conserved sequence in sequence-specific termination by T7 RNA polymerase
Q34525854Signaling of transcriptional chemistry in the on-line detection format
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Q44084686Structural transitions mediating transcription initiation by T7 RNA polymerase
Q28272398Structure and function in promoter escape by T7 RNA polymerase
Q33889142Structure of T7 RNA polymerase complexed to the transcriptional inhibitor T7 lysozyme
Q27639929Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution
Q40565671Studies on SP6 promoter using a new plasmid vector that allows gene insertion at the transcription initiation site
Q28189719T7 RNA polymerase
Q35838892T7 RNA polymerases backed up by covalently trapped proteins catalyze highly error prone transcription
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Q39646247T7 promoter release mediated by DNA scrunching
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Q74465518Template strand switching by T7 RNA polymerase
Q35835024The specificity loop of T7 RNA polymerase interacts first with the promoter and then with the elongating transcript, suggesting a mechanism for promoter clearance
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Q43665025Two site contact of elongating transcripts to phage T7 RNA polymerase at C-terminal regions
Q36070897Visualization and quantitative analysis of complex formation between E. coli RNA polymerase and an rRNA promoter in vitro

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