A decade of pollen transcriptomics.

scientific article published on 12 March 2015

A decade of pollen transcriptomics. is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

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P356DOI10.1007/S00497-015-0261-7
P932PMC publication ID4432081
P698PubMed publication ID25761645
P5875ResearchGate publication ID273467926

P50authorNicholas RutleyQ86907095
P2093author name stringDavid Twell
P2860cites workAuxin regulates Arabidopsis anther dehiscence, pollen maturation, and filament elongationQ44970852
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Pollen-specific, but not sperm-specific, genes show stronger purifying selection and higher rates of positive selection than sporophytic genes in Capsella grandifloraQ45112863
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Arabidopsis DUO POLLEN3 is a key regulator of male germline development and embryogenesisQ48068938
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Phosphorylation of a WRKY transcription factor by MAPKs is required for pollen development and function in ArabidopsisQ28538835
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De novo sequencing and analysis of the lily pollen transcriptome: an open access data source for an orphan plant speciesQ30487369
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Pollen tubes lacking a pair of K+ transporters fail to target ovules in Arabidopsis.Q50528420
POLLEN GERMINATION AND TUBE GROWTH.Q50993318
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ANXUR1 and 2, sister genes to FERONIA/SIRENE, are male factors for coordinated fertilization.Q51623147
MicroRNA profiles and their control of male gametophyte development in rice.Q51806075
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Integrating membrane transport with male gametophyte development and function through transcriptomics.Q52021070
SETH1 and SETH2, two components of the glycosylphosphatidylinositol anchor biosynthetic pathway, are required for pollen germination and tube growth in Arabidopsis.Q52096360
Expression of the cell cycle in sperm of Arabidopsis: implications for understanding patterns of gametogenesis and fertilization in plants and other eukaryotes.Q52180011
The SIDECAR POLLEN gene encodes a microspore-specific LOB/AS2 domain protein required for the correct timing and orientation of asymmetric cell division.Q53287503
Small RNA pathways are present and functional in the angiosperm male gametophyte.Q53365871
A novel class of MYB factors controls sperm-cell formation in plants.Q54682098
Expression patterns of a novel AtCHX gene family highlight potential roles in osmotic adjustment and K+ homeostasis in pollen development.Q54703133
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Pollen Development, a Genetic and Transcriptomic ViewQ57558740
Utility of RNA Sequencing for Analysis of Maize Reproductive TranscriptomesQ59240982
Profiling of translatomes of in vivo-grown pollen tubes reveals genes with roles in micropylar guidance during pollination in ArabidopsisQ59767894
Arabidopsis HAP2 (GCS1) is a sperm-specific gene required for pollen tube guidance and fertilizationQ60130304
Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptomeQ61679982
Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesisQ73200862
Comparative analysis of the Arabidopsis pollen transcriptomeQ73522003
The Arabidopsis thaliana gametophytic mutation gemini pollen1 disrupts microspore polarity, division asymmetry and pollen cell fateQ77208776
Stamen structure and functionQ80060200
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Genomic profiling of rice sperm cell transcripts reveals conserved and distinct elements in the flowering plant male germ lineageQ84420265
Pollen transcriptome analysis of Solanum tuberosum (2n = 4x = 48), S. demissum (2n = 6x = 72), and their reciprocal F1 hybridsQ86182057
Evaluation of rice promoters conferring pollen-specific expression in a heterologous system, ArabidopsisQ38441273
Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisQ38512636
Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation.Q38520376
A conversation across generations: soma-germ cell crosstalk in plants.Q38565918
Wide-scale screening of T-DNA lines for transcription factor genes affecting male gametophyte development in ArabidopsisQ39684934
The grapevine expression atlas reveals a deep transcriptome shift driving the entire plant into a maturation programQ42773393
RNA-seq of Arabidopsis pollen uncovers novel transcription and alternative splicingQ42773717
MOR1/GEM1 has an essential role in the plant-specific cytokinetic phragmoplast.Q42949963
Functional conservation of MIKC*-Type MADS box genes in Arabidopsis and rice pollen maturationQ43738562
Gamete attachment requires GEX2 for successful fertilization in Arabidopsis.Q43871554
Artificial microRNAs reveal cell-specific differences in small RNA activity in pollen.Q44597338
Isolation and expression of an anther-specific gene from tomatoQ44703838
The MYB80 transcription factor is required for pollen development and the regulation of tapetal programmed cell death in Arabidopsis thalianaQ44720779
Development and evaluation of an Arabidopsis whole genome Affymetrix probe arrayQ44846241
The ubiquitin-specific protease subfamily UBP3/UBP4 is essential for pollen development and transmission in ArabidopsisQ44932706
Analysis and visualization of RNA-Seq expression data using RStudio, Bioconductor, and Integrated Genome BrowserQ30908206
A genome-wide characterization of microRNA genes in maizeQ30912253
High-throughput sequencing of small RNAs from pollen and silk and characterization of miRNAs as candidate factors involved in pollen-silk interactions in maizeQ31133373
Sperm cells of Zea mays have a complex complement of mRNAs.Q31144708
Use of serial analysis of gene expression technology to reveal changes in gene expression in Arabidopsis pollen undergoing cold stressQ31146206
GENERATIVE CELL SPECIFIC 1 is essential for angiosperm fertilizationQ33230325
Expressed sequence tag analysis of Lilium longiflorum generative cellsQ33237961
Distinct short-range ovule signals attract or repel Arabidopsis thaliana pollen tubes in vitroQ33238904
Genes expressed in the male gametophyte of flowering plants and their isolationQ33241849
Identification of microspore-active promoters that allow targeted manipulation of gene expression at early stages of microgametogenesis in ArabidopsisQ33267391
Comparative transcriptomics of Arabidopsis sperm cells.Q33356346
Floral Transcriptomes in Woodland Strawberry Uncover Developing Receptacle and Anther Gene Networks.Q33358444
Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of riceQ33362291
Separated transcriptomes of male gametophyte and tapetum in rice: validity of a laser microdissection (LM) microarray.Q33364670
Various spatiotemporal expression profiles of anther-expressed genes in rice.Q33367485
Genomic expression profiling of mature soybean (Glycine max) pollenQ33415391
The Arabidopsis thaliana F-box protein FBL17 is essential for progression through the second mitosis during pollen developmentQ33416768
A plant germline-specific integrator of sperm specification and cell cycle progressionQ33419842
Gene expression in the dimorphic sperm cells of Plumbago zeylanica: transcript profiling, diversity, and relationship to cell type.Q33461773
Penetration of the stigma and style elicits a novel transcriptome in pollen tubes, pointing to genes critical for growth in a pistilQ33497907
Three MYB transcription factors control pollen tube differentiation required for sperm releaseQ33564581
Genome-scale analysis and comparison of gene expression profiles in developing and germinated pollen in Oryza sativaQ33589545
The meiotic transcriptome architecture of plants.Q33714255
Expressed sequence-tag analysis of tobacco sperm cells reveals a unique transcriptional profile and selective persistence of paternal transcripts after fertilization.Q33730400
Chasing the dream: plant EST microarraysQ33860616
Small RNAs in angiosperm gametophytes: from epigenetics to gamete developmentQ33885663
Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarraysQ34064362
Male gametophyte-specific WRKY34 transcription factor mediates cold sensitivity of mature pollen in ArabidopsisQ34112267
Origins, evolution, and phenotypic impact of new genes.Q34153587
Comprehensive analysis of tobacco pollen transcriptome unveils common pathways in polar cell expansion and underlying heterochronic shift during spermatogenesisQ34160607
Identification of genes specifically or preferentially expressed in maize silk reveals similarity and diversity in transcript abundance of different dry stigmasQ34322507
A transcriptional dynamic network during Arabidopsis thaliana pollen developmentQ34333587
Comparison of RNA-Seq and microarray in transcriptome profiling of activated T cellsQ34399620
The making of gametes in higher plantsQ34442482
"Out of pollen" hypothesis for origin of new genes in flowering plants: study from Arabidopsis thalianaQ34472529
A comparative study of the Arabidopsis thaliana guard-cell transcriptome and its modulation by sucroseQ34490309
Expression-based and co-localization detection of arabinogalactan protein 6 and arabinogalactan protein 11 interactors in Arabidopsis pollen and pollen tubesQ34538989
Transcriptional profiling of Arabidopsis root hairs and pollen defines an apical cell growth signature.Q34539081
Transcript profile analyses of maize silks reveal effective activation of genes involved in microtubule-based movement, ubiquitin-dependent protein degradation, and transport in the pollination processQ34542547
Arabidopsis hapless mutations define essential gametophytic functions.Q34569898
Selection of T-DNA-tagged male and female gametophytic mutants by segregation distortion in Arabidopsis.Q34604466
Five gametophytic mutations affecting pollen development and pollen tube growth in Arabidopsis thaliana.Q34613136
Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene lossQ34651956
Discovery of novel transcripts and gametophytic functions via RNA-seq analysis of maize gametophytic transcriptomes.Q35023386
MYB97, MYB101 and MYB120 function as male factors that control pollen tube-synergid interaction in Arabidopsis thaliana fertilizationQ35053062
Transcriptome dynamics through alternative polyadenylation in developmental and environmental responses in plants revealed by deep sequencing.Q35195969
Pollen gene expression: molecular evidenceQ35536082
Transcriptome profiling of male gametophyte development in Nicotiana tabacumQ35950202
Identification of putative Arabidopsis DEMETER target genes by GeneChip analysisQ36267242
De novo post-pollen mitosis II tobacco pollen tube transcriptomeQ36328160
MADS-complexes regulate transcriptome dynamics during pollen maturationQ36482041
Ensuring Reproduction at High Temperatures: The Heat Stress Response during Anther and Pollen Development.Q36833832
Reprogramming of DNA methylation in pollen guides epigenetic inheritance via small RNAQ36970371
Male reproductive development: gene expression profiling of maize anther and pollen ontogeny.Q37105957
Epigenetic reprogramming and small RNA silencing of transposable elements in pollenQ37142129
Epigenetic memory transmission through mitosis and meiosis in plants.Q37245506
How many genes are needed to make a pollen tube? Lessons from transcriptomics.Q37380801
RNA-seq differential expression studies: more sequence or more replication?Q37523925
Proteomics Advances in the Understanding of Pollen-Pistil InteractionsQ37636369
Male gametogenesis and germline specification in flowering plantsQ37811972
Epigenetic regulation and reprogramming during gamete formation in plantsQ37842924
MicroRNA activity in the Arabidopsis male germline.Q37847799
Pathfinding in angiosperm reproduction: pollen tube guidance by pistils ensures successful double fertilization.Q38117121
Perspectives on deciphering mechanisms underlying plant heat stress response and thermotoleranceQ38132392
Epigenetic reprogramming in plant sexual reproduction.Q38232403
The ARID-HMG DNA-binding protein AtHMGB15 is required for pollen tube growth in Arabidopsis thalianaQ38306432
Immunopurification of polyribosomal complexes of Arabidopsis for global analysis of gene expressionQ38324961
The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis.Q38337620
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue2
P921main subjectRNA sequencingQ2542347
pollenQ79932
transcriptomeQ252857
plant structureQ20011319
plant proteinsQ74708517
P304page(s)73-89
P577publication date2015-03-12
2015-06-01
P1433published inPlant ReproductionQ26842066
P1476titleA decade of pollen transcriptomics
P478volume28