Glycolysis for Microbiome Generation

scientific article published on June 2015

Glycolysis for Microbiome Generation is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/MICROBIOLSPEC.MBP-0014-2014
P932PMC publication ID4507297
P698PubMed publication ID26185089

P2093author name stringAlan J Wolfe
P2860cites workPurification and properties of two fructose-6-phosphate phosphoketolases in BifidobacteriumQ66886756
Crabtree effect in some bacterial culturesQ71213849
Glucose is essential for proliferation and the glycolytic enzyme induction that provokes a transition to glycolytic energy productionQ72878728
Development of the acetylation problem, a personal accountQ73672810
Regulation of RssB-dependent proteolysis in Escherichia coli: a role for acetyl phosphate in a response regulator-controlled processQ74355686
Consequences of biofilm and sessile growth in the large intestineQ74387145
EnvZ-independent phosphotransfer signaling pathway of the OmpR-mediated osmoregulatory expression of OmpC and OmpF in Escherichia coliQ77229892
The chemotaxis response regulator CheY can catalyze its own acetylationQ83186324
Acetyl phosphate-sensitive regulation of flagellar biogenesis and capsular biosynthesis depends on the Rcs phosphorelayQ83999384
From 'reactive C2 units' to acetyl coenzyme A: a long trail with an acetyl phosphate detour.Q53520450
Acetyl phosphate and the activation of two-component response regulators.Q54622233
What's for dinner?: Entner-Doudoroff metabolism in Escherichia coliQ24521218
The carbohydrate metabolism of certain pathological overgrowthsQ24534388
Understanding vaginal microbiome complexity from an ecological perspectiveQ26852265
Intestinal microbiota in health and disease: role of bifidobacteria in gut homeostasisQ27001712
Lactic acid bacteria contribution to gut microbiota complexity: lights and shadowsQ27011331
Structural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylationQ27683517
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Microbial production of 1,3-propanediolQ28146029
The Sir2 family of protein deacetylasesQ28266179
Vaginal microbiome of reproductive-age womenQ28284755
Structure and functions of the GNAT superfamily of acetyltransferasesQ28296840
Acetyladenylate plays a role in controlling the direction of flagellar rotationQ28360082
Role of acetyl-phosphate in activation of the Rrp2-RpoN-RpoS pathway in Borrelia burgdorferiQ28475520
Redox balance is key to explaining full vs. partial switching to low-yield metabolismQ29304928
THE METABOLISM OF TUMORS IN THE BODYQ29616202
The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and menQ29619117
Temporal dynamics of the human vaginal microbiotaQ30541808
Sir2-dependent activation of acetyl-CoA synthetase by deacetylation of active lysineQ30876890
Identification of the protein acetyltransferase (Pat) enzyme that acetylates acetyl-CoA synthetase in Salmonella entericaQ31088928
Acetylation of the chemotaxis response regulator CheY by acetyl-CoA synthetase purified from Escherichia coliQ31108083
Dynamics and associations of microbial community types across the human bodyQ31158807
The prevalence of species and strains in the human microbiome: a resource for experimental effortsQ33610082
Both acetate kinase and acetyl coenzyme A synthetase are involved in acetate-stimulated change in the direction of flagellar rotation in Escherichia coli.Q33724684
The acetate switchQ33755202
Physiologically relevant small phosphodonors link metabolism to signal transductionQ33762035
The Entner-Doudoroff pathway: history, physiology and molecular biologyQ33970790
Involvement of carbon source and acetyl phosphate in the external-pH-dependent expression of porin genes in Escherichia coliQ33993453
Colonic health: fermentation and short chain fatty acidsQ33995272
Phosphorylated CpxR restricts production of the RovA global regulator in Yersinia pseudotuberculosisQ34005457
Bacterial protein acetylation: the dawning of a new age.Q34009079
Evidence of uncultivated bacteria in the adult female bladder.Q34030420
Bacteria, colonic fermentation, and gastrointestinal healthQ34031323
Urine is not sterile: use of enhanced urine culture techniques to detect resident bacterial flora in the adult female bladder.Q34039459
The contribution of the large intestine to energy supplies in manQ34055329
The female urinary microbiome: a comparison of women with and without urgency urinary incontinence.Q34165475
Pentose fermentation by Lactobacillus plantarum. I. The cleavage of xylulose 5-phosphate by phosphoketolaseQ34243628
Vaginal microbiome: rethinking health and diseaseQ34285005
Short-chain fatty acids and human colonic function: roles of resistant starch and nonstarch polysaccharidesQ34294058
Why, when, and how did yeast evolve alcoholic fermentation?Q34419865
The metabolic enzyme AdhE controls the virulence of Escherichia coli O157:H7Q34598830
The Warburg and Crabtree effects: On the origin of cancer cell energy metabolism and of yeast glucose repressionQ34622979
Molecular dialogue between the human gut microbiota and the host: a Lactobacillus and Bifidobacterium perspectiveQ34629039
Acetoin metabolism in bacteriaQ34635937
Colonic bacterial metabolites and human healthQ34654550
The gut microbiome in health and in diseaseQ34907651
The role of short-chain fatty acids in health and disease.Q35081696
Biological significance of short-chain fatty acid metabolism by the intestinal microbiomeQ35081850
Post-translational modification of LipL32 during Leptospira interrogans infectionQ35377257
CheY's acetylation sites responsible for generating clockwise flagellar rotation in Escherichia coliQ35591644
A specificity determinant for phosphorylation in a response regulator prevents in vivo cross-talk and modification by acetyl phosphateQ35647593
Acetylation at Lys-92 enhances signaling by the chemotaxis response regulator protein CheY.Q36059913
Inhibition of acetyl phosphate-dependent transcription by an acetylatable lysine on RNA polymeraseQ36234801
Integrated next-generation sequencing of 16S rDNA and metaproteomics differentiate the healthy urine microbiome from asymptomatic bacteriuria in neuropathic bladder associated with spinal cord injury.Q36437217
Variations in the energy metabolism of biotechnologically relevant heterofermentative lactic acid bacteria during growth on sugars and organic acidsQ36529855
The Human Microbiome Project strategy for comprehensive sampling of the human microbiome and why it mattersQ36615138
Histone deacetylases--an important class of cellular regulators with a variety of functionsQ36766483
Phosphorylation of bacterial response regulator proteins by low molecular weight phospho-donorsQ36796339
Spectrum of bacterial colonization associated with urothelial cells from patients with chronic lower urinary tract symptomsQ36971016
Colonization of the streptomycin-treated mouse large intestine by a human fecal Escherichia coli strain: role of growth in mucusQ37003402
Acetylation of the response regulator RcsB controls transcription from a small RNA promoterQ37125410
Sirtuin/Sir2 phylogeny, evolutionary considerations and structural conservationQ37638325
Daily temporal dynamics of vaginal microbiota before, during and after episodes of bacterial vaginosisQ37669929
Involvement of protein acetylation in glucose-induced transcription of a stress-responsive promoterQ38570214
Glycolysis and Flux ControlQ38600987
CpxP, a stress-combative member of the Cpx regulon.Q39564596
OmpR regulates the stationary-phase acid tolerance response of Salmonella enterica serovar typhimuriumQ39587145
The central metabolic pathways of Escherichia coli: relationship between flux and control at a branch point, efficiency of conversion to biomass, and excretion of acetateQ39592386
Expression of the xylulose 5-phosphate phosphoketolase gene, xpkA, from Lactobacillus pentosus MD363 is induced by sugars that are fermented via the phosphoketolase pathway and is repressed by glucose mediated by CcpA and the mannose phosphoenolpyruQ39649973
Modulation of flagellar expression in Escherichia coli by acetyl phosphate and the osmoregulator OmpR.Q39837971
The Pasteur effect and the relations between respiration and fermentationQ39886463
Role of phosphorylated metabolic intermediates in the regulation of glutamine synthetase synthesis in Escherichia coliQ39940693
Alternative pathways of carbohydrate utilization in pseudomonadsQ40191389
Intestinal short-chain fatty acids alter Salmonella typhimurium invasion gene expression and virulence through BarA/SirA.Q40687509
CobB regulates Escherichia coli chemotaxis by deacetylating the response regulator CheY.Q40960311
Short-chain fatty acids in the human colon: relation to gastrointestinal health and disease.Q41049595
Enteric bacteria: friend or foe?Q41110440
Physiology of pyruvate metabolism in Lactococcus lactisQ41174230
Flux analysis and control of the central metabolic pathways in Escherichia coliQ41299282
Acetylation reduces the ability of CheY to undergo autophosphorylationQ42279826
Comparison of growth, acetate production, and acetate inhibition of Escherichia coli strains in batch and fed-batch fermentationsQ42927797
σ(N) -dependent control of acid resistance and the locus of enterocyte effacement in enterohemorrhagic Escherichia coli is activated by acetyl phosphate in a manner requiring flagellar regulator FlhDC and the σ(S) antagonist FliZ.Q43096103
Acetylation represses the binding of CheY to its target proteinsQ43096475
Acetylation of the response regulator, CheY, is involved in bacterial chemotaxisQ43612719
Dynamics of pyruvate metabolism in Lactococcus lactisQ43643727
Co-regulation of acetylation and phosphorylation of CheY, a response regulator in chemotaxis of Escherichia coliQ45029345
The Pta-AckA pathway controlling acetyl phosphate levels and the phosphorylation state of the DegU orphan response regulator both play a role in regulating Listeria monocytogenes motility and chemotaxisQ46238407
Mitochondrial oxidative phosphorylation is regulated by fructose 1,6-bisphosphate. A possible role in Crabtree effect induction?Q46444354
The gene encoding xylulose-5-phosphate/fructose-6-phosphate phosphoketolase (xfp) is conserved among Bifidobacterium species within a more variable region of the genome and both are useful for strain identificationQ46495263
Cloning and characterization of the gene encoding phosphoketolase in Leuconostoc mesenteroides isolated from kimchiQ46639641
In vivo acetylation of CheY, a response regulator in chemotaxis of Escherichia coliQ46782816
Acetyl phosphate and the phosphorylation of OmpR are involved in the regulation of the cell division rate in Escherichia coliQ47768383
Hexose/Pentose and Hexitol/Pentitol MetabolismQ50086013
Acetyladenylate or its derivative acetylates the chemotaxis protein CheY in vitro and increases its activity at the flagellar switchQ50171720
Characterization of fructose 6 phosphate phosphoketolases purified from Bifidobacterium species.Q50760183
Acetyl-phosphate is a critical determinant of lysine acetylation in E. coli.Q50855757
P433issue3
P921main subjectmicrobiomeQ1330402
P577publication date2015-06-01
P1433published inMicrobiology SpectrumQ27725717
P1476titleGlycolysis for Microbiome Generation
P478volume3

Reverse relations

cites work (P2860)
Q38667629Bacterial protein acetylation: new discoveries unanswered questions
Q91161460Biotransformation of organic micropollutants by anaerobic sludge enzymes
Q59339980Large-scale conformational changes and redistribution of surface negative charge upon sugar binding dictate the fidelity of phosphorylation in Vibrio cholerae fructokinase
Q64064341Mechanisms, Detection, and Relevance of Protein Acetylation in Prokaryotes
Q88596221Metabolic Reprogramming of Vibrio cholerae Impaired in Respiratory NADH Oxidation Is Accompanied by Increased Copper Sensitivity
Q90701788Metabolomics Study of the Synergistic Killing of Polymyxin B in Combination with Amikacin against Polymyxin-Susceptible and -Resistant Pseudomonas aeruginosa
Q63512989Passing the Baton: Substrate Channelling in Respiratory Metabolism
Q38628916Phylogenetically conserved resource partitioning in the coastal microbial loop.
Q90680930Supply of Methionine During Late-Pregnancy Alters Fecal Microbiota and Metabolome in Neonatal Dairy Calves Without Changes in Daily Feed Intake
Q57897824The Enzymatic Conversion of Major Algal and Cyanobacterial Carbohydrates to Bioethanol

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