scholarly article | Q13442814 |
P50 | author | John P. Bowman | Q41680751 |
Kari S Gobius | Q50731049 | ||
Chawalit Kocharunchitt | Q59696067 | ||
Tom Ross | Q74210862 | ||
P2093 | author name string | Thea King | |
P2860 | cites work | Conserved and variable functions of the sigmaE stress response in related genomes | Q24811266 |
T-profiler: scoring the activity of predefined groups of genes using gene expression data | Q24813372 | ||
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products | Q27860842 | ||
Exploration, normalization, and summaries of high density oligonucleotide array probe level data | Q27861098 | ||
Correlation between protein and mRNA abundance in yeast | Q28137554 | ||
A statistical model for identifying proteins by tandem mass spectrometry | Q28186251 | ||
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search | Q28211385 | ||
Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress | Q28250175 | ||
Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks | Q28471595 | ||
The Proteomics Identifications database: 2010 update | Q28749244 | ||
Java Treeview--extensible visualization of microarray data | Q29547226 | ||
A model for random sampling and estimation of relative protein abundance in shotgun proteomics | Q29547316 | ||
Open source clustering software | Q29547702 | ||
TANDEM: matching proteins with tandem mass spectra | Q29615238 | ||
Integrated genomic and proteomic analyses of a systematically perturbed metabolic network | Q29616021 | ||
Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments | Q31028802 | ||
Discordant protein and mRNA expression in lung adenocarcinomas | Q32148037 | ||
Proteome response of Escherichia coli fed-batch culture to temperature downshift | Q33218093 | ||
Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium | Q33304230 | ||
Characterization of the Cpx regulon in Escherichia coli strain MC4100. | Q33395214 | ||
Network analysis of the transcriptional pattern of young and old cells of Escherichia coli during lag phase | Q33516038 | ||
The sigmaE and Cpx regulatory pathways: overlapping but distinct envelope stress responses | Q33632494 | ||
Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress | Q33721504 | ||
Topological analysis of the aerobic membrane-bound formate dehydrogenase of Escherichia coli. | Q33744185 | ||
Exopolysaccharide production is required for development of Escherichia coli K-12 biofilm architecture | Q33905553 | ||
Lessons from Escherichia coli genes similarly regulated in response to nitrogen and sulfur limitation | Q33927430 | ||
DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide | Q33996654 | ||
Cold shock response in Escherichia coli | Q34004240 | ||
Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and saccharomyces cerevisiae responses to oxidative stress. | Q34052736 | ||
Hemorrhagic Colitis Associated with a RareEscherichia coliSerotype | Q34256166 | ||
Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations | Q34445192 | ||
Osmoregulation and its importance to food-borne microorganisms. | Q34618636 | ||
Submicromolar hydrogen peroxide disrupts the ability of Fur protein to control free-iron levels in Escherichia coli | Q34624969 | ||
Correlation of enterohemorrhagic Escherichia coli O157 prevalence in feces, hides, and carcasses of beef cattle during processing | Q35102179 | ||
Time-dependent proteome alterations under osmotic stress during aerobic and anaerobic growth in Escherichia coli | Q35130080 | ||
Stress and how bacteria cope with death and survival. | Q36007272 | ||
Protein identification using 2D-LC-MS/MS. | Q36049614 | ||
Cold-sensitive mutants of Escherichia coli resulting from increased feedback inhibition | Q36377980 | ||
The Rcs phosphorelay is a cell envelope stress response activated by peptidoglycan stress and contributes to intrinsic antibiotic resistance | Q36483740 | ||
Regulation of capsular polysaccharide synthesis in Escherichia coli K12. | Q37479221 | ||
Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli | Q37573783 | ||
SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences. | Q37583338 | ||
Prevalence of Shiga toxin-producing Escherichia coli in beef | Q37953585 | ||
A microarray-based antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of Escherichia coli | Q38358029 | ||
Genome-wide transcriptional responses of Escherichia coli K-12 to continuous osmotic and heat stresses | Q38608652 | ||
Functional characterization and regulation of gadX, a gene encoding an AraC/XylS-like transcriptional activator of the Escherichia coli glutamic acid decarboxylase system | Q39679110 | ||
Profiling early osmostress-dependent gene expression in Escherichia coli using DNA macroarrays | Q39680318 | ||
Genome-wide analyses revealing a signaling network of the RcsC-YojN-RcsB phosphorelay system in Escherichia coli | Q39887844 | ||
A role for exopolysaccharides in the protection of microorganisms from desiccation. | Q39914266 | ||
False discovery rates and related statistical concepts in mass spectrometry-based proteomics | Q40145988 | ||
Integrated genomic and proteomic analyses of gene expression in Mammalian cells | Q40538549 | ||
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity | Q41863185 | ||
Growth rate-dependent global effects on gene expression in bacteria | Q42062295 | ||
Overproduction of exopolysaccharides by an Escherichia coli K-12 rpoS mutant in response to osmotic stress | Q42121314 | ||
New method for exopolysaccharide determination in culture broth using stirred ultrafiltration cells | Q42514881 | ||
Ion transport and osmotic adjustment in Escherichia coli in response to ionic and non-ionic osmotica. | Q42597427 | ||
Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. | Q42645426 | ||
Global responses of Escherichia coli to adverse conditions determined by microarrays and FT-IR spectroscopy | Q43273861 | ||
The potential use of chilling to control the growth of Enterobacteriaceae on porcine carcasses and the incidence of E. coli O157:H7 in pigs | Q43622407 | ||
Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae | Q44049342 | ||
Protective effect of exopolysaccharide colanic acid of Escherichia coli O157:H7 to osmotic and oxidative stress | Q44911006 | ||
Characterization of transport through the periplasmic histidine permease using proteoliposomes reconstituted by dialysis. | Q45988095 | ||
Comparison of label-free methods for quantifying human proteins by shotgun proteomics. | Q46568113 | ||
Rates of chilling to 0 degrees C: implications for the survival of microorganisms and relationship with membrane fluidity modifications. | Q46865437 | ||
Excess histidine enzymes cause AICAR-independent filamentation in Escherichia coli. | Q50158349 | ||
Absence of insertions among spontaneous mutants of Salmonella typhimurium | Q50195685 | ||
Spectral index for assessment of differential protein expression in shotgun proteomics. | Q50650030 | ||
Dynamical analysis of gene networks requires both mRNA and protein expression information. | Q52075450 | ||
Proteomics: theoretical and experimental considerations. | Q52213033 | ||
Influence of tyrosine-kinase Wzc activity on colanic acid production in Escherichia coli K12 cells. | Q54447877 | ||
Modification of lipopolysaccharide with colanic acid (M-antigen) repeats in Escherichia coli. | Q54448386 | ||
Role of colanic acid exopolysaccharide in the survival of enterohaemorrhagic Escherichia coli O157:H7 in simulated gastrointestinal fluids. | Q54465157 | ||
Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12. | Q54495569 | ||
The RcsC sensor kinase is required for normal biofilm formation in Escherichia coli K-12 and controls the expression of a regulon in response to growth on a solid surface. | Q54514553 | ||
Changes in Escherichia coli transcriptome during acclimatization at low temperature. | Q54517502 | ||
RcsCDB His-Asp phosphorelay system negatively regulates the flhDC operon in Escherichia coli. | Q54521795 | ||
Prevalence and numbers of Escherichia coli O157:H7 in minced beef and beef burgers from butcher shops and supermarkets in the Republic of Ireland | Q57719480 | ||
Outbreaks of enterohaemorrhagic Escherichia coli O157:H7 infection by two different genotype strains in Japan, 1996 | Q71547937 | ||
A new spectrophotometric test for the detection of methylpentose | Q75996713 | ||
Modelling the effects of temperature, water activity, pH and lactic acid concentration on the growth rate of Escherichia coli | Q78727175 | ||
P433 | issue | 1 | |
P921 | main subject | transcriptome | Q252857 |
Escherichia coli O157:H7 str. Sakai | Q21102930 | ||
P304 | page(s) | M111.009019 | |
P577 | publication date | 2011-10-18 | |
P1433 | published in | Molecular & Cellular Proteomics | Q6895932 |
P1476 | title | Integrated transcriptomic and proteomic analysis of the physiological response of Escherichia coli O157:H7 Sakai to steady-state conditions of cold and water activity stress | |
P478 | volume | 11 |
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