Dynamics of water in biological recognition

scientific article published on April 2004

Dynamics of water in biological recognition is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1021/CR020689L
P698PubMed publication ID15080722
P5875ResearchGate publication ID8621931

P50authorAhmed ZewailQ106624
P2093author name stringSamir Kumar Pal
P2860cites workMechanisms of tryptophan fluorescence shifts in proteinsQ24537447
Base pairing and mutagenesis: observation of a protonated base pair between 2-aminopurine and cytosine in an oligonucleotide by proton NMRQ24630526
Solution structure of a sweet protein single-chain monellin determined by nuclear magnetic resonance and dynamical simulated annealing calculationsQ27639808
The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG)Q27689067
Three-dimensional crystal structure of the A-tract DNA dodecamer d(CGCAAATTTGCG) complexed with the minor-groove-binding drug Hoechst 33258Q27729381
Two crystal structures of a potently sweet protein. Natural monellin at 2.75 A resolution and single-chain monellin at 1.7 A resolutionQ27731451
The crystal structure of subtilisin Carlsberg in anhydrous dioxane and its comparison with those in water and acetonitrileQ27736243
Some factors in the interpretation of protein denaturationQ28202994
Molecular recognition of DNA by small moleculesQ28216029
Molecular recognition mediated by bound water. A mechanism for star activity of the restriction endonuclease EcoRIQ28255976
Femtosecond dynamics of rubredoxin: tryptophan solvation and resonance energy transfer in the protein.Q30329283
Water at DNA surfaces: ultrafast dynamics in minor groove recognitionQ30502661
Thermodynamics of drug-DNA interactionsQ30697899
Hydration of DNA bases: analysis of crystallographic dataQ30855685
Site- and sequence-selective ultrafast hydration of DNAQ30883654
NMR observation of individual molecules of hydration water bound to DNA duplexes: direct evidence for a spine of hydration water present in aqueous solutionQ30894628
Photophysical properties of fluorescent DNA-dyes bound to single- and double-stranded DNA in aqueous buffered solutionQ33182148
Femtosecond dynamics of flavoproteins: charge separation and recombination in riboflavine (vitamin B2)-binding protein and in glucose oxidase enzymeQ33946860
The anticancer drug-DNA complex: femtosecond primary dynamics for anthracycline antibiotics functionQ33951725
X-Ray Photographs of Crystalline PepsinQ59060706
Femtosecond solvation dynamics of waterQ59061638
How to keep dry in waterQ59062692
Measurement of Local DNA Reorganization on the Picosecond and Nanosecond Time ScalesQ59300894
Biological Water: Femtosecond Dynamics of Macromolecular HydrationQ60159046
Dielectric Relaxation and Solvation Dynamics of Water in Complex Chemical and Biological SystemsQ60159126
Time-Dependent Stokes Shift and Its Calculation from Solvent Dielectric Dispersion DataQ62111822
Structure of myoglobin refined at 2-0 A resolution. I. Crystallographic refinement of metmyoglobin from sperm whaleQ67557477
The role of bound water in haemoglobin and myoblobinQ67598548
Protein hydration in aqueous solutionQ68053669
Dielectric study on hydration of B-, A-, and Z-DNAQ68657665
Structure and dynamics of a fluorescent DNA oligomer containing the EcoRI recognition sequence: fluorescence, molecular dynamics, and NMR studiesQ69415455
Structure of a B-DNA dodecamer. III. Geometry of hydrationQ71099483
Molecular dynamics simulation of hydration in myoglobinQ72061285
Influence of drug binding on DNA hydration: acoustic and densimetric characterizations of netropsin binding to the poly(dAdT).poly(dAdT) and poly(dA).poly(dT) duplexes and the poly(dT).poly(dA).poly(dT) triplex at 25 degrees CQ72076864
Protein hydration dynamics in aqueous solutionQ73309229
A molecular simulation picture of DNA hydration around A- and B-DNAQ73504154
Chemistry. Snapshots of water at workQ73687400
Molecular dynamics simulation study of DNA dodecamer d(CGCGAATTCGCG) in solution: conformation and hydrationQ73770081
The hydration problem in solution biophysics: an introductionQ77530425
The hydration of nucleic acid duplexes as assessed by a combination of volumetric and structural techniquesQ78234086
Raising water to new heightsQ81220497
Protein FluorescenceQ99204879
Biological water at the protein surface: dynamical solvation probed directly with femtosecond resolutionQ34010989
Water in enzyme reactions: biophysical aspects of hydration-dehydration processesQ34015438
Hydration at the surface of the protein Monellin: dynamics with femtosecond resolutionQ34036412
Crystal structure of the intensely sweet protein monellinQ34050297
Molecular recognition of oxygen by protein mimics: dynamics on the femtosecond to microsecond time scaleQ34074841
Self-assembly at all scalesQ34121253
The dynamics of protein hydration water: a quantitative comparison of molecular dynamics simulations and neutron-scattering experimentsQ34174606
Molecular structure of the B-DNA dodecamer d(CGCAAATTTGCG)2. An examination of propeller twist and minor-groove water structure at 2.2 A resolutionQ34324882
Ultrafast surface hydration dynamics and expression of protein functionality: alpha -ChymotrypsinQ34385481
Spectral studies on 33258 Hoechst and related bisbenzimidazole dyes useful for fluorescent detection of deoxyribonucleic acid synthesisQ34452788
Water as it applies to the function of enzymesQ34600145
Solvation and hydration of proteins and nucleic acids: a theoretical view of simulation and experimentQ34691133
Purification of monellin, the sweet principle of Dioscoreophyllum cumminsii.Q34701149
Femtosecond dynamics of the DNA intercalator ethidium and electron transfer with mononucleotides in water.Q34983532
Excited-state photophysics of an acridine derivative selectively intercalated in duplex DNA.Q35016687
The RNA-protein complex: direct probing of the interfacial recognition dynamics and its correlation with biological functionsQ35167316
Femtosecond direct observation of charge transfer between bases in DNAQ35832479
Femtosecond studies of protein-ligand hydrophobic binding and dynamics: human serum albumin.Q35832778
Studies on Brugia pahangi. 13. The anthelmintic effect of compounds F151 (Friedheim), HOE 33258 (Hoechst) and their reaction productQ36605806
Hydration and solution structure of d(CGCAAATTTGCG)2 and its complex with propamidine from NMR and molecular modellingQ36848231
Kinetics of DNA hydrationQ36860503
Femtosecond dynamics of DNA-mediated electron transfer.Q37193810
Chemostimulatory Protein: A New Type of Taste StimulusQ38928573
Expression of functionality of alpha-chymotrypsin. The structure of a fluorescent probe--alpha-chymotrypsin complex and the nature of its pH dependenceQ39242309
Anomalous structure and properties of poly (dA).poly(dT). Computer simulation of the polynucleotide structure with the spine of hydration in the minor grooveQ40564487
Physiochemical and physiological mechanisms for the effects of food on drug absorption: the role of lipids and pH.Q41364364
Overview lecture. Hydration processes in biological and macromolecular systemsQ41459483
Interaction of .alpha.-chymotrypsin with the fluorescent probe 1-anilinonaphthalene-8-sulfonate in solutionQ41482383
Similarity of fluorescence lifetime distributions for single tryptophan proteins in the random coil state.Q42184621
Femtosecond charge transfer dynamics of a modified DNA base: 2-aminopurine in complexes with nucleotidesQ44219824
Dynamic interactions of fluorescence probes with the solvent environmentQ44704862
Femtosecond molecular dynamics of tautomerization in model base pairs.Q45951972
Hydrophobicity: two faces of water.Q46010891
Dynamics of ordered water in interfacial enzyme recognition: bovine pancreatic phospholipase A2.Q46044765
Ultrafast dynamics in DNA-mediated electron transfer: base gating and the role of temperatureQ46051068
Femtosecond studies of protein-DNA binding and dynamics: histone I.Q46281917
The taste-active regions of monellin, a potently sweet proteinQ46593092
Neutron diffraction study of carbonmonoxymyoglobinQ52445691
A View of the Hydrophobic EffectQ56880426
NMR studies of the hydration of biological macromoleculesQ57825837
P433issue4
P304page(s)2099-2123
P577publication date2004-04-01
P1433published inChemical ReviewsQ900502
P1476titleDynamics of water in biological recognition
P478volume104

Reverse relations

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