Tentacle: distributed quantification of genes in metagenomes

scientific article published on 7 September 2015

Tentacle: distributed quantification of genes in metagenomes is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1027641814
P356DOI10.1186/S13742-015-0078-1
P2888exact matchhttps://scigraph.springernature.com/pub.10.1186/s13742-015-0078-1
P932PMC publication ID4562114
P698PubMed publication ID26351566
P5875ResearchGate publication ID281581402

P50authorFredrik BoulundQ39486890
P2093author name stringErik Kristiansson
Anders Sjögren
P2860cites workDistMap: a toolkit for distributed short read mapping on a Hadoop clusterQ34979578
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A human gut microbial gene catalogue established by metagenomic sequencingQ24618931
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Search and clustering orders of magnitude faster than BLASTQ29547431
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis.Q34095481
Microbial metagenomics: beyond the genomeQ34165228
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A survey of sequence alignment algorithms for next-generation sequencingQ34619507
Benchmarking short sequence mapping toolsQ34768286
P304page(s)40
P577publication date2015-09-07
P1433published inGigaScienceQ19969338
P1476titleTentacle: distributed quantification of genes in metagenomes
P478volume4

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cites work (P2860)
Q89863764Carnelian uncovers hidden functional patterns across diverse study populations from whole metagenome sequencing reads
Q55175006Comparison of normalization methods for the analysis of metagenomic gene abundance data.
Q36353830HirBin: high-resolution identification of differentially abundant functions in metagenomes.
Q35904373Statistical evaluation of methods for identification of differentially abundant genes in comparative metagenomics

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