Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani.

scientific article published on 14 October 2015

Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1186/S12864-015-1997-Z
P932PMC publication ID4607151
P698PubMed publication ID26467299
P5875ResearchGate publication ID282850529

P50authorKok Gan ChanQ41584589
Patrick BlinQ42382919
Slimane KhayiQ56810804
P2093author name stringDenis Faure
Frédérique Van Gijsegem
Mohieddine Moumni
Valérie Hélias
Jacques Pédron
Teik-Min Chong
P2860cites workSequence diversity in the Dickeya fliC gene: phylogeny of the Dickeya genus and TaqMan® PCR for 'D. solani', new biovar 3 variant on potato in EuropeQ21134607
Lateral gene transfer and the nature of bacterial innovationQ22122396
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0Q24498082
Horizontal gene transfer among genomes: the complexity hypothesisQ24651300
Bioinformatic genome comparisons for taxonomic and phylogenetic assignments using Aeromonas as a test caseQ28650558
Mauve: multiple alignment of conserved genomic sequence with rearrangementsQ29547292
Horizontal gene transfer in prokaryotes: quantification and classificationQ29616017
DNA-DNA hybridization values and their relationship to whole-genome sequence similaritiesQ29617100
How clonal are bacteria?Q29618572
Burkholderia ambifaria sp. nov., a novel member of the Burkholderia cepacia complex including biocontrol and cystic fibrosis-related isolatesQ30658029
Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum).Q30694391
Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. nov. and Pectobacterium wasabiae sp. novQ30787846
Dickeya species relatedness and clade structure determined by comparison of recA sequences.Q33484607
Systemic colonization of potato plants by a soilborne, green fluorescent protein-tagged strain of Dickeya sp. biovar 3.Q33522437
FliC, a flagellin protein, is essential for the growth and virulence of fish pathogen Edwardsiella tardaQ34425215
Reduced virulence of an fliC mutant of Shiga-toxigenic Escherichia coli O113:H21.Q34491859
Signatures of natural selection and ecological differentiation in microbial genomesQ35052893
Genomic and metabolic comparison with Dickeya dadantii 3937 reveals the emerging Dickeya solani potato pathogen to display distinctive metabolic activities and T5SS/T6SS-related toxin repertoireQ35148606
Horizontal gene transfer and phylogeneticsQ35565613
Evolution by acquisition: the case for horizontal gene transfersQ35624024
Mobile genetic elements: the agents of open source evolutionQ36247081
Replacing and additive horizontal gene transfer in StreptococcusQ36320957
The Burkholderia Genome Database: facilitating flexible queries and comparative analysesQ37090715
Genomic islands: tools of bacterial horizontal gene transfer and evolutionQ37248338
Host range and molecular phylogenies of the soft rot enterobacterial genera pectobacterium and dickeya.Q37305946
Genomic evidence for two functionally distinct gene classes.Q37393145
Role of RpoS in virulence of pathogens.Q37641571
Genome Sequence of the Emerging Plant Pathogen Dickeya solani Strain RNS 08.23.3.1A.Q41901849
Regulators involved in Dickeya solani virulence, genetic conservation, and functional variabilityQ42231805
Niche-specificity and the variable fraction of the Pectobacterium pan-genome.Q43678047
dnaJ is a useful phylogenetic marker for alphaproteobacteriaQ45318810
Dickeya species: an emerging problem for potato production in EuropeQ56785269
Detection of phytopathogens of the genusDickeyausing a PCR primer prediction pipeline for draft bacterial genome sequencesQ57446986
The flagellar sigma factor fliA is required for Dickeya dadantii virulenceQ82238481
???Q28261323
P407language of work or nameEnglishQ1860
P921main subjectgenomicsQ222046
Dickeya solaniQ5273669
emerging pathogenQ108429945
P304page(s)788
P577publication date2015-10-14
P1433published inBMC GenomicsQ15765854
P1476titlePopulation genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani
P478volume16

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cites work (P2860)
Q58780878Comparison of Highly and Weakly Virulent Strains, With a View on the Pangenome and Panregulon of This Species
Q52716402Complete Chromosome and Plasmid Sequences of Two Plant Pathogens, Dickeya solani Strains D s0432-1 and PPO 9019.
Q37450320Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222T.
Q60910564Genomic characterisation of the new Dickeya fangzhongdai species regrouping plant pathogens and environmental isolates
Q46305160Interplay of classic Exp and specific Vfm quorum sensing systems on the phenotypic features of Dickeya solani strains exhibiting different virulence levels.

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