RASA: Robust Alternative Splicing Analysis for Human Transcriptome Arrays.

scientific article published on 6 July 2015

RASA: Robust Alternative Splicing Analysis for Human Transcriptome Arrays. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1038/SREP11917
P2888exact matchhttps://scigraph.springernature.com/pub.10.1038/srep11917
P932PMC publication ID4491729
P698PubMed publication ID26145443
P5875ResearchGate publication ID280029897

P50authorWeihong XuQ57003684
P2093author name stringRonald W Davis
Wenzhong Xiao
Junhee Seok
P2860cites workDiscovery of tissue-specific exons using comprehensive human exon microarraysQ21092870
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusionsQ21999527
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiationQ24627354
HITS-CLIP yields genome-wide insights into brain alternative RNA processingQ24648963
The STAT3-Binding Long Noncoding RNA lnc-DC Controls Human Dendritic Cell DifferentiationQ61645724
Exploration, normalization, and summaries of high density oligonucleotide array probe level dataQ27861098
Alternative isoform regulation in human tissue transcriptomesQ27861118
Mechanisms of alternative pre-messenger RNA splicingQ28131822
CLIP identifies Nova-regulated RNA networks in the brainQ28184312
Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarraysQ28235146
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencingQ29547470
Pre-mRNA splicing and human diseaseQ29617335
Genome-wide detection of tissue-specific alternative splicing in the human transcriptomeQ31106050
MADS+: discovery of differential splicing events from Affymetrix exon junction array dataQ33516452
Are splicing mutations the most frequent cause of hereditary disease?Q33985993
Insights into the connection between cancer and alternative splicingQ34008519
Diversification of stem cell molecular repertoire by alternative splicing.Q34063436
Genomewide analysis of mRNA processing in yeast using splicing-specific microarraysQ34126595
Function of alternative splicingQ34554255
Human transcriptome array for high-throughput clinical studies.Q34621484
A robust estimation of exon expression to identify alternative spliced genes applied to human tissues and cancer samples.Q35314318
Global analysis of alternative splicing during T-cell activationQ35697465
Knowledge-based reconstruction of mRNA transcripts with short sequencing reads for transcriptome researchQ35721580
Splice variants as cancer biomarkersQ35826741
Exon arrays provide accurate assessments of gene expressionQ35906488
Statistical inferences for isoform expression in RNA-SeqQ37153258
Using high-density exon arrays to profile gene expression in closely related speciesQ37259119
MADS: a new and improved method for analysis of differential alternative splicing by exon-tiling microarraysQ39970502
Alternative splicing in disease and therapyQ44879918
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P407language of work or nameEnglishQ1860
P921main subjecttranscriptomeQ252857
alternative mRNA splicing, via spliceosomeQ21114084
P304page(s)11917
P577publication date2015-07-06
P1433published inScientific ReportsQ2261792
P1476titleRASA: Robust Alternative Splicing Analysis for Human Transcriptome Arrays
P478volume5

Reverse relations

cites work (P2860)
Q33730440A random effects model for the identification of differential splicing (REIDS) using exon and HTA arrays
Q33726896Comparative evaluation of isoform-level gene expression estimation algorithms for RNA-seq and exon-array platforms
Q58698506Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm
Q35311560Genomics of injury: The Glue Grant experience
Q33771657RNA sequencing and transcriptome arrays analyses show opposing results for alternative splicing in patient derived samples
Q55077901The Usage of Exon-Exon Splice Junctions for the Detection of Alternative Splicing using the REIDS model.

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