| scholarly article | Q13442814 |
| P50 | author | Yury Bukhman | Q50420542 |
| Oleg Moskvin | Q61158359 | ||
| Shawn D. Mansfield | Q38641478 | ||
| Eric T. Johnson | Q42034014 | ||
| P2093 | author name string | John Ralph | |
| Nicholas Santoro | |||
| Patrick F Dowd | |||
| Cliff E Foster | |||
| Paul Nicholson | |||
| Steven D Karlen | |||
| Yaseen Mottiar | |||
| Cynthia L Cass | |||
| John C Sedbrook | |||
| Antoine Peraldi | |||
| Nick Thrower | |||
| Laura C Bruno | |||
| Megan E Willhoit | |||
| Megha Phutane | |||
| P2860 | cites work | Genome sequencing and analysis of the model grass Brachypodium distachyon | Q22122196 |
| GAGE: generally applicable gene set enrichment for pathway analysis | Q24645628 | ||
| Lignin biosynthesis | Q28204209 | ||
| Magnaporthe grisea interactions with the model grass Brachypodium distachyon closely resemble those with rice (Oryza sativa) | Q28285826 | ||
| How cell wall complexity influences saccharification efficiency in Miscanthus sinensis | Q28647445 | ||
| Perturbation of Brachypodium distachyon CELLULOSE SYNTHASE A4 or 7 results in abnormal cell walls | Q28661368 | ||
| Analysis of pectin mutants and natural accessions of Arabidopsis highlights the impact of de-methyl-esterified homogalacturonan on tissue saccharification | Q28661413 | ||
| Functional characterization of cinnamyl alcohol dehydrogenase and caffeic acid O-methyltransferase in Brachypodium distachyon | Q28687066 | ||
| Differentially enhanced insect resistance, at a cost, in Arabidopsis thaliana constitutively expressing a transcription factor of defensive metabolites | Q42043968 | ||
| Inverse relationship between systemic resistance of plants to microorganisms and to insect herbivory | Q42058840 | ||
| Phylogeny and structure of the cinnamyl alcohol dehydrogenase gene family in Brachypodium distachyon | Q42404452 | ||
| Revealing different systems responses to brown planthopper infestation for pest susceptible and resistant rice plants with the combined metabonomic and gene-expression analysis | Q42862576 | ||
| Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon | Q43459718 | ||
| Structure and some characterization of the gene for phenylalanine ammonia-lyase from rice plants | Q44137150 | ||
| Identification of the structure and origin of thioacidolysis marker compounds for cinnamyl alcohol dehydrogenase deficiency in angiosperms | Q44156042 | ||
| Phenylpropanoid compounds and disease resistance in transgenic tobacco with altered expression of L-phenylalanine ammonia-lyase | Q44567239 | ||
| Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism | Q45065718 | ||
| Changes in rice allelopathy and rhizosphere microflora by inhibiting rice phenylalanine ammonia-lyase gene expression | Q45103599 | ||
| Virus-induced gene silencing of WRKY53 and an inducible phenylalanine ammonia-lyase in wheat reduces aphid resistance | Q45375173 | ||
| Cinnamic-derived acids significantly affect Fusarium graminearum growth and in vitro synthesis of type B trichothecenes. | Q45970247 | ||
| Fusarium graminearum exploits ethylene signalling to colonize dicotyledonous and monocotyledonous plants | Q46042351 | ||
| Rapid analysis of poplar lignin monomer composition by a streamlined thioacidolysis procedure and near-infrared reflectance-based prediction modeling | Q46064610 | ||
| Differential regulation of phenylalanine ammonia-lyase genes during plant development and by environmental cues | Q46205889 | ||
| Dehydrodimers of Ferulic Acid in Maize Grain Pericarp and Aleurone: Resistance Factors to Fusarium graminearum | Q46303687 | ||
| A potential role for sinapyl p-coumarate as a radical transfer mechanism in grass lignin formation | Q46463125 | ||
| Identification of the structure and origin of a thioacidolysis marker compound for ferulic acid incorporation into angiosperm lignins (and an indicator for cinnamoyl CoA reductase deficiency). | Q46816049 | ||
| Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa. | Q51102639 | ||
| Identification of metabolites related to mechanisms of resistance in barley against Fusarium graminearum, based on mass spectrometry. | Q53993373 | ||
| Stress-Induced Phenylpropanoid Metabolism | Q56609351 | ||
| Phenylalanine ammonia-lyase and cell wall peroxidase are cooperatively involved in the extensive formation of ferulate network in cell walls of developing rice shoots | Q82687194 | ||
| Two phenylalanine ammonia lyase isoforms are involved in the elicitor-induced response of rice to the fungal pathogen Magnaporthe oryzae | Q82787352 | ||
| Designed for deconstruction--poplar trees altered in cell wall lignification improve the efficacy of bioethanol production | Q83218002 | ||
| Induction of Phenylalanine Deaminase by Light and its Relation to Chlorogenic Acid Synthesis in Potato Tuber Tissue | Q83241115 | ||
| Enhancing alfalfa conversion efficiencies for sugar recovery and ethanol production by altering lignin composition | Q83807856 | ||
| Wheat blast: histopathology and transcriptome reprogramming in response to adapted and nonadapted Magnaporthe isolates | Q84327928 | ||
| Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance | Q86310558 | ||
| Lignin biosynthesis perturbations affect secondary cell wall composition and saccharification yield in Arabidopsis thaliana | Q28687375 | ||
| Chemical diversity and defence metabolism: how plants cope with pathogens and ozone pollution | Q28749150 | ||
| Biomass recalcitrance: engineering plants and enzymes for biofuels production | Q29547628 | ||
| MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes | Q30004199 | ||
| Brachypodium distachyon: a new pathosystem to study Fusarium head blight and other Fusarium diseases of wheat | Q33922340 | ||
| Crystal structure of phenylalanine ammonia lyase: multiple helix dipoles implicated in catalysis | Q33981145 | ||
| Methylidene-imidazolone (MIO) from histidine and phenylalanine ammonia-lyase | Q34098527 | ||
| Maize phenylalanine ammonia-lyase has tyrosine ammonia-lyase activity | Q34414390 | ||
| Discovery of a substrate selectivity switch in tyrosine ammonia-lyase, a member of the aromatic amino acid lyase family | Q34593828 | ||
| Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass | Q34621503 | ||
| A TILLING Platform for Functional Genomics in Brachypodium distachyon | Q34804504 | ||
| p-Coumaroyl-CoA:monolignol transferase (PMT) acts specifically in the lignin biosynthetic pathway in Brachypodium distachyon | Q34806695 | ||
| Helicoverpa zea (Lepidoptera: Noctuidae) and Spodoptera frugiperda (Lepidoptera: Noctuidae) Responses to Sorghum bicolor (Poales: Poaceae) Tissues From Lowered Lignin Lines | Q35949153 | ||
| RNA silencing platforms in plants. | Q36247664 | ||
| Phylogenetic, Molecular, and Biochemical Characterization of Caffeic Acid o-Methyltransferase Gene Family in Brachypodium distachyon | Q36582657 | ||
| Roles of pectin in biomass yield and processing for biofuels | Q36718529 | ||
| Conservation, Divergence, and Genome-Wide Distribution of PAL and POX A Gene Families in Plants | Q36825612 | ||
| A modern view of phenylalanine ammonia lyase | Q36870873 | ||
| A force of nature: molecular mechanisms of mechanoperception in plants | Q37280982 | ||
| Sucrose synthase affects carbon partitioning to increase cellulose production and altered cell wall ultrastructure | Q37293342 | ||
| Rapid transient induction of phenylalanine ammonia-lyase mRNA in elicitor-treated bean cells | Q37534743 | ||
| Action and reaction of host and pathogen during Fusarium head blight disease | Q37609561 | ||
| Feruloylation in grasses: current and future perspectives | Q37614000 | ||
| Abiotic and biotic stresses and changes in the lignin content and composition in plants | Q37727374 | ||
| Genome‐wide analysis of phenylpropanoid defence pathways | Q37804470 | ||
| Grass phenylpropanoids: regulate before using! | Q37979451 | ||
| Can genetic engineering of lignin deposition be accomplished without an unacceptable yield penalty? | Q38066303 | ||
| PlaNet: combined sequence and expression comparisons across plant networks derived from seven species | Q38502841 | ||
| Functional analysis of the Arabidopsis PAL gene family in plant growth, development, and response to environmental stress. | Q39084185 | ||
| Characteristics of plant cell walls affecting intake and digestibility of forages by ruminants | Q40959399 | ||
| Modification of esterified cell wall phenolics increases vulnerability of tall fescue to herbivory by the fall armyworm | Q42013826 | ||
| Cell wall composition as a maize defense mechanism against corn borers. | Q42018279 | ||
| Oral toxicity of beta-N-acetyl hexosaminidase to insects. | Q42033818 | ||
| P4510 | describes a project that uses | ImageJ | Q1659584 |
| P433 | issue | 14 | |
| P921 | main subject | biomass | Q2945560 |
| abiotic stress | Q4667893 | ||
| cell wall | Q128700 | ||
| P304 | page(s) | 4317-4335 | |
| P577 | publication date | 2015-06-19 | |
| P1433 | published in | Journal of Experimental Botany | Q6295179 |
| P1476 | title | Effects of PHENYLALANINE AMMONIA LYASE (PAL) knockdown on cell wall composition, biomass digestibility, and biotic and abiotic stress responses in Brachypodium | |
| P478 | volume | 66 |
| Q46347520 | Allelopathic effects of exogenous phenylalanine: a comparison of four monocot species |
| Q47292106 | Biochemical and structural analysis of substrate specificity of a phenylalanine ammonia-lyase |
| Q26741128 | Biosynthesis and Metabolic Fate of Phenylalanine in Conifers |
| Q41688053 | Biotechnological Strategies to Improve Plant Biomass Quality for Bioethanol Production. |
| Q42124307 | Cell Wall Composition and Biomass Recalcitrance Differences Within a Genotypically Diverse Set of Brachypodium distachyon Inbred Lines |
| Q47152566 | Cell wall composition and lignin biosynthetic gene expression along a developmental gradient in an Australian sugarcane cultivar |
| Q47818419 | Characterization of promoter of EgPAL1, a novel PAL gene from the oil palm Elaeis guineensis Jacq |
| Q58695015 | Comparative analysis of Cd-responsive maize and rice transcriptomes highlights Cd co-modulated orthologs |
| Q88051669 | Comparative effects of L-DOPA and velvet bean seed extract on soybean lignification |
| Q91709235 | Correlations between lignin content and structural robustness in plants revealed by X-ray ptychography |
| Q26771614 | Designer lignins: harnessing the plasticity of lignification |
| Q48310121 | Disrupting Flavone Synthase II Alters Lignin and Improves Biomass Digestibility |
| Q56333526 | Does leaf litter from invasive plants contribute the same support of a stream ecosystem function as native vegetation? |
| Q92942302 | Does long-term cadmium exposure influence the composition of pectic polysaccharides in the cell wall of Medicago sativa stems? |
| Q64077802 | EGTA reduces the inflorescence stem mechanical strength of herbaceous peony by modifying secondary wall biosynthesis |
| Q38724314 | Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon |
| Q92450106 | Identification and characterization of genes frequently responsive to Xanthomonas oryzae pv. oryzae and Magnaporthe oryzae infections in rice |
| Q90352623 | Increased drought tolerance in plants engineered for low lignin and low xylan content |
| Q39268419 | Integrated analysis of rice transcriptomic and metabolomic responses to elevated night temperatures identifies sensitivity- and tolerance-related profiles |
| Q92208556 | Melatonin enhances cotton immunity to Verticillium wilt via manipulating lignin and gossypol biosynthesis |
| Q45069253 | Multifaceted plant responses to circumvent Phe hyperaccumulation by downregulation of flux through the shikimate pathway and by vacuolar Phe sequestration. |
| Q101574316 | Overexpression of OsCM alleviates BLB stress via phytohormonal accumulation and transcriptional modulation of defense-related genes in Oryza sativa |
| Q38867248 | Paving the Way for Lignin Valorisation: Recent Advances in Bioengineering, Biorefining and Catalysis. |
| Q29544019 | Role of bifunctional ammonia-lyase in grass cell wall biosynthesis |
| Q94502788 | Salicylic Acid Biosynthesis in Plants |
| Q46447583 | Silencing CHALCONE SYNTHASE in Maize Impedes the Incorporation of Tricin into Lignin and Increases Lignin Content. |
| Q41975035 | Stover Composition in Maize and Sorghum Reveals Remarkable Genetic Variation and Plasticity for Carbohydrate Accumulation |
| Q35783344 | The Arabidopsis RCC1 Family Protein TCF1 Regulates Freezing Tolerance and Cold Acclimation through Modulating Lignin Biosynthesis |
| Q64295230 | The Structural Integrity of Lignin Is Crucial for Resistance against Parasitism in Rice |
| Q64059664 | Transcriptional and Metabolomic Analyses Indicate that Cell Wall Properties are Associated with Drought Tolerance in |
| Q92003124 | Transcriptome analysis and codominant markers development in caper, a drought tolerant orphan crop with medicinal value |
| Q46244935 | Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat |
| Q47762172 | Transcriptome-Wide Identification and Characterization of Potato Circular RNAs in Response to Pectobacterium carotovorum Subspecies brasiliense Infection |
| Q102141684 | Utilization of Cladophora glomerata extract nanoparticles as eco-nematicide and enhancing the defense responses of tomato plants infected by Meloidogyne javanica |
| Q88341782 | Wound Stress, an Unheeded Factor for Echinacoside Accumulation in Cistanche deserticola Y. C. Ma |
| Q89563317 | miR477 targets the phenylalanine ammonia-lyase gene and enhances the susceptibility of the tea plant (Camellia sinensis) to disease during Pseudopestalotiopsis species infection |
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