Transcriptome-wide analysis supports environmental adaptations of two Pinus pinaster populations from contrasting habitats

scientific article published on 6 November 2015

Transcriptome-wide analysis supports environmental adaptations of two Pinus pinaster populations from contrasting habitats is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1186/S12864-015-2177-X
P8608Fatcat IDrelease_zej6q4opyjd2bipd2mgmzcx2w4
P932PMC publication ID4636790
P698PubMed publication ID26545587
P5875ResearchGate publication ID283539821

P50authorConcepción AvilaQ54858771
Rafael CañasQ56750566
Francisco M CanovasQ56750567
P2093author name stringJuan Majada
Isabel Feito
José Francisco Fuente-Maqueda
P2860cites workA Mechanistic Model of PCR for Accurate Quantification of Quantitative PCR DataQ21562175
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Early cone setting in Picea abies acrocona is associated with increased transcriptional activity of a MADS box transcription factorQ28709318
Transcriptome profiling in conifers and the PiceaGenExpress database show patterns of diversification within gene families and interspecific conservation in vascular gene expressionQ28710132
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Mining and visualization of microarray and metabolomic data reveal extensive cell wall remodeling during winter hardening in Sitka spruce (Picea sitchensis)Q30000831
MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processesQ30004199
Comparison of genetic diversity estimates within and among populations of maritime pine using chloroplast simple-sequence repeat and amplified fragment length polymorphism dataQ30689616
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Intra-annual dynamics of non-structural carbohydrates in the cambium of mature conifer trees reflects radial growth demandsQ33356725
A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis)Q33375873
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Subgroup 4 R2R3-MYBs in conifer trees: gene family expansion and contribution to the isoprenoid- and flavonoid-oriented responsesQ34112256
RNA-seq and microarray complement each other in transcriptome profiling.Q34478275
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A flavonoid 3-O-glucoside:2"-O-glucosyltransferase responsible for terminal modification of pollen-specific flavonols in Arabidopsis thalianaQ34808275
Genetic variation of drought tolerance in Pinus pinaster at three hierarchical levels: a comparison of induced osmotic stress and field testingQ35041147
Transcriptome analysis of Pinus monticola primary needles by RNA-seq provides novel insight into host resistance to Cronartium ribicolaQ35068342
Transcriptome analysis in maritime pine using laser capture microdissection and 454 pyrosequencingQ35082090
Photosynthesis of Overwintering Evergreen PlantsQ35540313
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Separate and combined responses to water deficit and UV-B radiation.Q38155305
The role of gibberellin signalling in plant responses to abiotic stressQ38172481
Role of aquaporins in determining transpiration and photosynthesis in water-stressed plants: crop water-use efficiency, growth and yieldQ38231314
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Abscisic acid mediates a divergence in the drought response of two conifers.Q38922021
Range-wide phylogeography and gene zones in Pinus pinaster Ait. revealed by chloroplast microsatellite markers.Q38924616
Limited genetic variability and phenotypic plasticity detected for cavitation resistance in a Mediterranean pineQ39159002
De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology.Q39311385
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No time for spruce: rapid dampening of circadian rhythms in Picea abies (L. Karst).Q46956215
Association of FLOWERING LOCUS T/TERMINAL FLOWER 1-like gene FTL2 expression with growth rhythm in Scots pine (Pinus sylvestris).Q47997722
Global monitoring of autumn gene expression within and among phenotypically divergent populations of Sitka spruce (Picea sitchensis).Q51112512
Variations in growth, survival and carbon isotope composition (delta(13)C) among Pinus pinaster populations of different geographic origins.Q51120836
Selection of haploid cell lines from megagametophyte cultures of maritime pine as a DNA source for massive sequencing of the speciesQ57240465
Intra-specific variability in biomass partitioning and carbon isotopic discrimination under moderate drought stress in seedlings from four Pinus pinaster populationsQ57240583
A self-regulatory circuit of CIRCADIAN CLOCK-ASSOCIATED1 underlies the circadian clock regulation of temperature responses in ArabidopsisQ57259751
A Myb transcription factor regulates genes of the phenylalanine pathway in maritime pineQ57995438
Determination of the total phenolic, flavonoid and proline contents in Burkina Fasan honey, as well as their radical scavenging activityQ58786638
Quantitative analysis of major plant hormones in crude plant extracts by high-performance liquid chromatography–mass spectrometryQ62070306
Cytokinin profiling in plant tissues using ultra-performance liquid chromatography-electrospray tandem mass spectrometryQ81475209
A white spruce gene catalog for conifer genome analysesQ84509555
P4510describes a project that useslimmaQ112236343
P407language of work or nameEnglishQ1860
P921main subjecthabitatQ52105
Pinus pinasterQ271582
P304page(s)909
P577publication date2015-11-06
P1433published inBMC GenomicsQ15765854
P1476titleTranscriptome-wide analysis supports environmental adaptations of two Pinus pinaster populations from contrasting habitats
P478volume16

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cites work (P2860)
Q46278724PpNAC1, a main regulator of phenylalanine biosynthesis and utilization in maritime pine
Q36411019The gene expression landscape of pine seedling tissues.
Q47430785The role of arginine metabolic pathway during embryogenesis and germination in maritime pine (Pinus pinaster Ait.).
Q89850615Transcriptional analysis of arogenate dehydratase genes identifies a link between phenylalanine biosynthesis and lignin biosynthesis

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