An improved method for photofootprinting yeast genes in vivo using Taq polymerase

scientific article published in January 1989

An improved method for photofootprinting yeast genes in vivo using Taq polymerase is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/17.1.171
P8608Fatcat IDrelease_qpffc7w4znandfwmat3wx3dh3e
P932PMC publication ID331543
P698PubMed publication ID2643080
P5875ResearchGate publication ID20513296

P2093author name stringJ Majors
J D Axelrod
P2860cites workTHE ULTRAVIOLET PHOTOCHEMISTRY OF THYMIDYLYL-(3'-5')-THYMIDINEQ76936204
Photochemistry of thymine dimersQ78938660
Genomic sequencingQ24594942
Deoxyribonucleic acid polymerase from the extreme thermophile Thermus aquaticusQ24642284
Sequences That Regulate the Divergent GAL1-GAL10 Promoter in Saccharomyces cerevisiaeQ29547797
In vivo "photofootprint" changes at sequences between the yeast GAL1 upstream activating sequence and "TATA" element require activated GAL4 protein but not a functional TATA elementQ33634470
Cyclobutane pyrimidine dimers and (6-4) photoproducts block polymerization by DNA polymerase I.Q34201465
Sites of termination of in vitro DNA synthesis on ultraviolet- and N-acetylaminofluorene-treated phi X174 templates by prokaryotic and eukaryotic DNA polymerasesQ35300157
Structural determination of the ultraviolet light-induced thymine-cytosine pyrimidine-pyrimidone (6-4) photoproductQ35557181
In vivo DNA-binding properties of a yeast transcription activator proteinQ36921261
Rapid "footprinting" on supercoiled DNA.Q37687388
Sites of inhibition of in vitro DNA synthesis in carcinogen- and UV-treated Φ174 DNAQ41644747
High-resolution analysis of lac transcription complexes inside cells.Q54775597
Photofootprinting in vivo detects transcription-dependent changes in yeast TATA boxesQ59073930
Use of light for footprinting DNA in vivoQ71367215
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)171-183
P577publication date1989-01-01
P1433published inNucleic Acids ResearchQ135122
P1476titleAn improved method for photofootprinting yeast genes in vivo using Taq polymerase
P478volume17

Reverse relations

cites work (P2860)
Q34303478A novel thermostable polymerase for DNA sequencing
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Q41075496Alu-mediated detection of DNA damage in the human genome
Q28776775Amino termini of histones H3 and H4 are required for a1-alpha2 repression in yeast
Q40423060Analysis of DNA damage and repair in murine leukemia L1210 cells using a quantitative polymerase chain reaction assay
Q77892606Analysis of nucleosome positioning in mammalian cells
Q38323694Assays for nucleosome positioning in yeast
Q40229150Assessment of DNA damage and repair in specific genomic regions by quantitative immuno-coupled PCR.
Q38329636Binding of transcription factors creates hot spots for UV photoproducts in vivo
Q34589576Binding to the yeast SwI4,6-dependent cell cycle box, CACGAAA, is cell cycle regulated in vivo
Q27938163Cell cycle dependent topological changes of chromosomal replication origins in Saccharomyces cerevisiae
Q42625082Cell type-specific chromatin organization of the region that governs directionality of yeast mating type switching
Q33718807ChIP-Seq using high-throughput DNA sequencing for genome-wide identification of transcription factor binding sites
Q38287979ChIP-chip: a genomic approach for identifying transcription factor binding sites
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Q35848017Fine-mapping of DNA damage and repair in specific genomic segments
Q34290009Genomic footprinting in mammalian cells with ultraviolet light
Q27940233Genomic footprinting of the yeast zinc finger protein Rme1p and its roles in repression of the meiotic activator IME1.
Q47631793Genomic sequencing by ligation-mediated PCR.
Q38346168Hap1p photofootprinting as an in vivo assay of repression mechanism in Saccharomyces cerevisiae
Q38312403In vivo analysis of chromatin following nystatin-mediated import of active enzymes into Saccharomyces cerevisiae.
Q38363050In vivo footprinting of human mitochondrial DNA in cultured cell systems.
Q40539543Incomplete primer extension during in vitro DNA amplification catalyzed by Taq polymerase; exploitation for DNA sequencing
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Q77892577Mapping cyclobutane-pyrimidine dimers in DNA and using DNA-repair by photolyase for chromatin analysis in yeast
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Q33887313Nucleosome structure and positioning modulate nucleotide excision repair in the non-transcribed strand of an active gene
Q35932019Nucleosomes are positioned with base pair precision adjacent to the alpha 2 operator in Saccharomyces cerevisiae
Q27936600Proline-independent binding of PUT3 transcriptional activator protein detected by footprinting in vivo
Q39459028RNA polymerase III transcription complexes on chromosomal 5S rRNA genes in vivo: TFIIIB occupancy and promoter opening
Q34594225Taq DNA polymerase blockage at pyrimidine dimers
Q47681914The ability of a variety of polymerases to synthesize past site-specific cis-syn, trans-syn-II, (6-4), and Dewar photoproducts of thymidylyl-(3'-->5')-thymidine
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