Characterization, high-resolution mapping and differential expression of three homologous PAL genes in Coffea canephora Pierre (Rubiaceae)

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Characterization, high-resolution mapping and differential expression of three homologous PAL genes in Coffea canephora Pierre (Rubiaceae) is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1007/S00425-012-1613-2
P932PMC publication ID3382651
P698PubMed publication ID22349733
P5875ResearchGate publication ID221847037

P50authorClaudine CampaQ100384155
Alexandre de KochkoQ127687982
Dominique CrouzillatQ127687987
P2093author name stringJames McCarthy
Michel Rigoreau
Nathalie Chabrillange
Maud Lepelley
Venkataramaiah Mahesh
P2860cites workThe Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)Q22065883
Organization and expression of eucaryotic split genes coding for proteinsQ27861081
Proanthocyanidins in health care: current and new trendsQ28260890
Phenylpropanoid biosynthesisQ28268774
Coffee and tomato share common gene repertoires as revealed by deep sequencing of seed and cherry transcriptsQ28768103
Isolation and genetic mapping of a Coffea canephora phenylalanine ammonia-lyase gene (CcPAL1) and its involvement in the accumulation of caffeoyl quinic acidsQ33238606
Tomato phenylalanine ammonia-lyase gene family, highly redundant but strongly underutilizedQ33374213
Specific down-regulation of PAL genes by artificial microRNAs in Populus trichocarpaQ34132324
Serine-202 is the putative precursor of the active site dehydroalanine of phenylalanine ammonia lyase. Site-directed mutagenesis studies on the enzyme from parsley (Petroselinum crispum L.).Q72106997
Transgene-mediated and elicitor-induced perturbation of metabolic channeling at the entry point into the phenylpropanoid pathwayQ78132417
Flavonoid accumulation in Arabidopsis repressed in lignin synthesis affects auxin transport and plant growthQ79609513
A detailed synteny map of the eggplant genome based on conserved ortholog set II (COSII) markersQ83163178
Identification of quantitative trait loci for agronomically important traits and their association with genic-microsatellite markers in sorghumQ83455599
Engineering plants with increased levels of the antioxidant chlorogenic acidQ34316310
Diet-derived phenols in plasma and tissues and their implications for healthQ34383497
Biosynthesis of flavonoids and effects of stressQ34605574
Biotechnology of flavonoids and other phenylpropanoid-derived natural products. Part I: Chemical diversity, impacts on plant biology and human health.Q34700835
Phenylalanine ammonia-lyase gene organization and structureQ35052241
Analysis of nonuniformity in intron phase distributionQ35070332
Chalcones: an update on cytotoxic and chemoprotective propertiesQ36048269
Structure, inheritance, and expression of hybrid poplar (Populus trichocarpa x Populus deltoides) phenylalanine ammonia-lyase genesQ36742262
Involvement of Pinus taeda MYB1 and MYB8 in phenylpropanoid metabolism and secondary cell wall biogenesis: a comparative in planta analysisQ36958029
From beans to berries and beyond: teamwork between plant chemicals for protection of optimal human healthQ36994812
Metabolic pathways in tropical dicotyledonous albuminous seeds: Coffea arabica as a case study.Q37270122
Fruit and vegetable intake and risk of cardiovascular disease in US adults: the first National Health and Nutrition Examination Survey Epidemiologic Follow-up StudyQ38898097
Functional analysis of the Arabidopsis PAL gene family in plant growth, development, and response to environmental stress.Q39084185
Inhibition of pro-inflammatory responses and antioxidant capacity of Mexican blackberry (Rubus spp.) extractsQ39666652
Phenylalanine ammonia-lyase in potato (Solanum tuberosum L.). Genomic complexity, structural comparison of two selected genes and modes of expressionQ42041420
Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedlingQ42375507
Towards a systems approach for lignin biosynthesis in Populus trichocarpa: transcript abundance and specificity of the monolignol biosynthetic genes.Q43227333
Phenylalanine ammonia-lyase (PAL) from tobacco (Nicotiana tabacum): characterization of the four tobacco PAL genes and active heterotetrameric enzymesQ43282001
Differential expression of two distinct phenylalanine ammonia-lyase genes in condensed tannin-accumulating and lignifying cells of quaking aspen.Q44177252
Genetic mapping of a caffeoyl-coenzyme A 3-O-methyltransferase gene in coffee trees. Impact on chlorogenic acid contentQ44513457
Genome-wide characterization of the lignification toolbox in ArabidopsisQ44652208
Silencing of hydroxycinnamoyl-coenzyme A shikimate/quinate hydroxycinnamoyltransferase affects phenylpropanoid biosynthesisQ44909762
The Arabidopsis phenylalanine ammonia lyase gene family: kinetic characterization of the four PAL isoforms.Q44994719
Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolismQ45065718
Antioxidant properties of roasted coffee residuesQ46409345
AtMYB12 regulates caffeoyl quinic acid and flavonol synthesis in tomato: expression in fruit results in very high levels of both types of polyphenolQ46471538
Modulation of chlorogenic acid biosynthesis in Solanum lycopersicum; consequences for phenolic accumulation and UV-tolerance.Q46566633
Transcriptional co-regulation of secondary metabolism enzymes in Arabidopsis: functional and evolutionary implications.Q46607412
Differential regulation of grain sucrose accumulation and metabolism in Coffea arabica (Arabica) and Coffea canephora (Robusta) revealed through gene expression and enzyme activity analysisQ46667884
Differential expression of four Arabidopsis PAL genes; PAL1 and PAL2 have functional specialization in abiotic environmental-triggered flavonoid synthesisQ46776900
Epidermis is a pivotal site of at least four secondary metabolic pathways in Catharanthus roseus aerial organs.Q46831688
Biosynthesis of chlorogenic acids in growing and ripening fruits of Coffea arabica and Coffea canephora plants.Q46858330
A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growthQ46868163
Oleosin gene family of Coffea canephora: quantitative expression analysis of five oleosin genes in developing and germinating coffee grainQ46916051
Characterization by LC-MS(n) of four new classes of chlorogenic acids in green coffee beans: dimethoxycinnamoylquinic acids, diferuloylquinic acids, caffeoyl-dimethoxycinnamoylquinic acids, and feruloyl-dimethoxycinnamoylquinic acidsQ46989862
Phenylalanine ammonia-lyase gene structure, expression, and evolution in NicotianaQ48066653
Characterization of the structure and determination of mRNA levels of the phenylalanine ammonia-lyase gene family from Populus kitakamiensisQ48071148
The phenylalanine ammonia-lyase gene family in Arabidopsis thaliana.Q48075944
SSR mining in coffee tree EST databases: potential use of EST-SSRs as markers for the Coffea genusQ48085206
Alkylperoxyl radical-scavenging activity of various flavonoids and other phenolic compounds: implications for the anti-tumor-promoter effect of vegetables.Q53416700
Stress-Induced Phenylpropanoid MetabolismQ56609351
Chlorogenic acid synthesis in coffee: An analysis of CGA content and real-time RT-PCR expression of HCT, HQT, C3H1, and CCoAOMT1 genes during grain development in C. canephoraQ57875242
Inhibition of phenolic acid metabolism results in precocious cell death and altered cell morphology in leaves of transgenic tobacco plantsQ58321098
Changes in phenolic profile and antioxidant activity during production of diced tomatoesQ59158023
P433issue1
P921main subjectCoffea canephoraQ47532
RubiaceaeQ156569
P1104number of pages14
P304page(s)313-326
P577publication date2012-02-21
P1433published inPlantaQ15762724
P1476titleCharacterization, high-resolution mapping and differential expression of three homologous PAL genes in Coffea canephora Pierre (Rubiaceae)
P478volume236

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cites work (P2860)
Q35937652Advances in genomics for the improvement of quality in coffee.
Q48509440Chlorogenic acids and the acyl-quinic acids: discovery, biosynthesis, bioavailability and bioactivity.
Q64360518Development and evaluation of a genome-wide Coffee 8.5K SNP array and its application for high-density genetic mapping and for investigating the origin of Coffea arabica L
Q43089074Differential regulation of caffeine metabolism in Coffea arabica (Arabica) and Coffea canephora (Robusta).
Q37091845Early phenylpropanoid biosynthetic steps in Cannabis sativa: link between genes and metabolites
Q61816788Genome-Wide Identification and Transcriptional Expression of the Gene Family in Common Walnut ( L.)
Q41730991Genome-wide identification of phenolic acid biosynthetic genes in Salvia miltiorrhiza
Q39627635Molecular cloning and promoter analysis of the specific salicylic acid biosynthetic pathway gene phenylalanine ammonia-lyase (AaPAL1) from Artemisia annua
Q44868508Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa
Q39837766Structure, expression profile and phylogenetic inference of chalcone isomerase-like genes from the narrow-leafed lupin (Lupinus angustifolius L.) genome
Q88899696The phenylalanine ammonia-lyase gene family in Isatis indigotica Fort.: molecular cloning, characterization, and expression analysis
Q46722330The phenylalanine ammonia-lyase gene family in Salvia miltiorrhiza: genome-wide characterization, molecular cloning and expression analysis
Q35779666Transcriptome Analysis Reveals the Mechanism Underlying the Production of a High Quantity of Chlorogenic Acid in Young Leaves of Lonicera macranthoides Hand.-Mazz
Q55010833Transcriptome sequencing and analysis during seed growth and development in Euryale ferox Salisb.
Q89761681Transcriptomic Analysis of Ficus carica Peels with a Focus on the Key Genes for Anthocyanin Biosynthesis
Q35224212Transcriptomic analysis of Litchi chinensis pericarp during maturation with a focus on chlorophyll degradation and flavonoid biosynthesis
Q91909710Wheat straw increases the defense response and resistance of watermelon monoculture to Fusarium wilt

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