Escherichia coli Fis and DnaA proteins bind specifically to the nrd promoter region and affect expression of an nrd-lac fusion

scientific article

Escherichia coli Fis and DnaA proteins bind specifically to the nrd promoter region and affect expression of an nrd-lac fusion is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.176.2.378-387.1994
P932PMC publication ID205060
P698PubMed publication ID8288532

P2093author name stringJ A Fuchs
B A Jacobson
L B Augustin
P2860cites workA rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingQ25938984
The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA bindingQ27655580
Rapid and efficient site-specific mutagenesis without phenotypic selectionQ27860628
Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranesQ28131700
Production of single-stranded plasmid DNAQ29547328
Improved single and multicopy lac-based cloning vectors for protein and operon fusionsQ29615296
Mutational analysis of a prokaryotic recombinational enhancer element with two functionsQ33559983
Isolation of the gene encoding the Hin recombinational enhancer binding proteinQ33574350
Escherichia coli host factor for site-specific DNA inversion: cloning and characterization of the fis gene.Q33580657
Regulation of the operon encoding ribonucleotide reductase in Escherichia coli: evidence for both positive and negative controlQ33879830
The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites.Q34245423
Dramatic changes in Fis levels upon nutrient upshift in Escherichia coliQ36137894
Efficient excision of phage lambda from the Escherichia coli chromosome requires the Fis proteinQ36147986
Multiple effects of Fis on integration and the control of lysogeny in phage lambdaQ36148023
Regulation of the operon encoding ribonucleotide reductase: role of the negative sites in nrd repressionQ36159643
Primary structure of the Escherichia coli ribonucleoside diphosphate reductase operonQ36271616
Regulation of ribonucleoside diphosphate reductase mRNA synthesis in Escherichia coliQ36329685
Characterization of the mRNA coding for ribonucleoside diphosphate reductase in Escherichia coliQ36333544
Regulation of the synthesis of ribonucleoside diphosphate reductase in Escherichia coli: specific activity of the enzyme in relationship to perturbations of DNA replicationQ36422911
Mapping of nrdA and nrdB in Escherichia coli K-12Q36576353
Escherichia coli ribonucleotide reductase expression is cell cycle regulatedQ37374392
Control of cyclic chromosome replication in Escherichia coliQ37480508
Footprinting DNA-protein complexes in situ following gel retardation assays using 1,10-phenanthroline-copper ion: Escherichia coli RNA polymerase-lac promoter complexesQ38348378
Mutants of Escherichia coli requiring methionine or vitamin B12Q39513131
Reduction of RibonucleotidesQ39805408
Initiation of DNA Synthesis in Escherichia ColiQ39805506
Involvement of Fis protein in replication of the Escherichia coli chromosomeQ39933054
FIS-dependent trans activation of stable RNA operons of Escherichia coli under various growth conditionsQ39934971
Construction and characterization of hybrid plasmids containing the Escherichia coli nrd region.Q40336304
Analysis of the terminator region after the deoCABD operon of Escherichia coli K-12 using a new class of single copy number operon-fusion vectorsQ40388841
The FIS protein binds and bends the origin of chromosomal DNA replication, oriC, of Escherichia coliQ40505779
The role of FIS in trans activation of stable RNA operons of E. coliQ41204267
E.coli Fis protein activates ribosomal RNA transcription in vitro and in vivoQ41231233
The E.coli fis promoter is subject to stringent control and autoregulationQ41519126
FIS-dependent trans-activation of tRNA and rRNA operons of Escherichia coliQ43828414
A system to study promoter and terminator signals recognized by Escherichia coli RNA polymeraseQ43900180
Purification and DNA-binding properties of FIS and Cin, two proteins required for the bacteriophage P1 site-specific recombination system, cin.Q44932442
Ribonucleoside diphosphate reductase. Purification of the two subunits, proteins B1 and B2.Q47790520
Autoregulation of the dnaA gene of Escherichia coli K12.Q54461902
FIS-induced bending of a region upstream of the promoter activates transcription of the E coli thrU (tufB) operonQ54696365
Cellular factors couple recombination with growth phase: characterization of a new component in the lambda site-specific recombination pathway.Q54761410
Control of Tn5 transposition in Escherichia coli is mediated by protein from the right repeatQ67233020
Purification and properties of the Escherichia coli host factor required for inversion of the G segment in bacteriophage MuQ68917141
DnaA protein/DNA interaction. Modulation of the recognition sequenceQ70157660
Requirement of protein synthesis for the induction of ribonucleoside diphosphate reductase mRNA in Escherichia coliQ70316142
Effects of promoter strengths and growth conditions on copy number of transcription-fusion vectorsQ71393999
P433issue2
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
P304page(s)378-387
P577publication date1994-01-01
P1433published inJournal of BacteriologyQ478419
P1476titleEscherichia coli Fis and DnaA proteins bind specifically to the nrd promoter region and affect expression of an nrd-lac fusion
P478volume176

Reverse relations

cites work (P2860)
Q34468299A novel regulatory mechanism couples deoxyribonucleotide synthesis and DNA replication in Escherichia coli.
Q33944015A transcriptional response to replication status mediated by the conserved bacterial replication protein DnaA.
Q39931538Cell cycle regulation of the Escherichia coli nrd operon: requirement for a cis-acting upstream AT-rich sequence
Q34513737Common and variable contributions of Fis residues to high-affinity binding at different DNA sequences
Q35631367Deletion analysis of the fis promoter region in Escherichia coli: antagonistic effects of integration host factor and Fis.
Q42450615Distribution of stable DnaA-binding sites on the Bacillus subtilis genome detected using a modified ChIP-chip method
Q52947285DnaA as a transcription regulator.
Q38318393DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus
Q43058421DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli.
Q44775863Escherichia coli prereplication complex assembly is regulated by dynamic interplay among Fis, IHF and DnaA.
Q42502019Expression analysis of the nrdHIEF operon from Escherichia coli. Conditions that trigger the transcript level in vivo
Q39852920FNR-mediated oxygen-responsive regulation of the nrdDG operon of Escherichia coli
Q39838288Fis activates the RpoS-dependent stationary-phase expression of proP in Escherichia coli
Q35614536Fis binding in the dnaA operon promoter region
Q37075386Functional analysis of the Streptomyces coelicolor NrdR ATP-cone domain: role in nucleotide binding, oligomerization, and DNA interactions.
Q24563143Genome of bacteriophage P1
Q36700176Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts
Q73666157Growth-phase regulation of the Escherichia coli thioredoxin gene
Q42041830H-NS is a novel transcriptional modulator of the ribonucleotide reductase genes in Escherichia coli
Q42458035In vivo transcription of nrdAB operon and of grxA and fpg genes is triggered in Escherichia coli lacking both thioredoxin and glutaredoxin 1 or thioredoxin and glutathione, respectively
Q34646135Information analysis of Fis binding sites
Q48301794Insufficient levels of the nrdAB-encoded ribonucleotide reductase underlie the severe growth defect of the Δhda E. coli strain.
Q33905769Interactions of glutaredoxins, ribonucleotide reductase, and components of the DNA replication system of Escherichia coli.
Q74648033Interactions of the Streptomyces lividans initiator protein DnaA with its target
Q39835481Mutations in Escherichia coli dnaA which suppress a dnaX(Ts) polymerization mutation and are dominant when located in the chromosomal allele and recessive on plasmids
Q35922997Novel mutator mutants of E. coli nrdAB ribonucleotide reductase: insight into allosteric regulation and control of mutation rates
Q28550116NrdR Transcription Regulation: Global Proteome Analysis and Its Role in Escherichia coli Viability and Virulence
Q54572355Occlusion of RNA polymerase by oligomerization of DnaA protein over the dnaA promoter of Escherichia coli.
Q37075862Once in a lifetime: strategies for preventing re-replication in prokaryotic and eukaryotic cells.
Q40998388Regulation of synthesis of ribonucleotide reductase and relationship to DNA replication in various systems
Q39896222Regulation of the Escherichia coli nrd operon: role of DNA supercoiling
Q28474730Ribonucleotide reductases of Salmonella typhimurium: transcriptional regulation and differential role in pathogenesis
Q33725419Role of decreased levels of Fis histone-like protein in Crohn's disease-associated adherent invasive Escherichia coli LF82 bacteria interacting with intestinal epithelial cells
Q46303108The Caulobacter crescentus chromosome replication origin evolved two classes of weak DnaA binding sites
Q36755347The relationship between dNTP pool levels and mutagenesis in an Escherichia coli NDP kinase mutant
Q39798858The tRNA thiolation pathway modulates the intracellular redox state in Escherichia coli
Q54559175Threonine 435 of Escherichia coli DnaA protein confers sequence-specific DNA binding activity.

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