AlignStat: a web-tool and R package for statistical comparison of alternative multiple sequence alignments

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AlignStat: a web-tool and R package for statistical comparison of alternative multiple sequence alignments is …
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scholarly articleQ13442814

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P6409CORE ID81862107
P8978DBLP publication IDjournals/bmcbi/ShafeeC16
P6179Dimensions Publication ID1030247392
P1292DNB edition ID1119858380
P356DOI10.1186/S12859-016-1300-6
P2888exact matchhttps://scigraph.springernature.com/pub.10.1186/s12859-016-1300-6
P4028Google Scholar paper ID12268798579020948625
P6366Microsoft Academic ID2541544080
P932PMC publication ID5081975
P698PubMed publication ID27784265
P5875ResearchGate publication ID309467793
P8299Semantic Scholar corpus ID7508780
P4011Semantic Scholar paper ID70a102c865a6e2c4249138f59e5039348ddd418c
P4109URN-NBNurn:nbn:de:1111-201611228579

P50authorIra R CookeQ55979563
Thomas ShafeeQ38382414
P2860cites workA comprehensive comparison of multiple sequence alignment programsQ24548825
Large-scale comparison of protein sequence alignment algorithms with structure alignmentsQ46972510
The Defensins Consist of Two Independent, Convergent Protein SuperfamiliesQ47301333
Multiple Sequence Alignment Accuracy and Phylogenetic InferenceQ58887659
BAliBASE 3.0: latest developments of the multiple sequence alignment benchmarkQ80934686
SIMPROT: using an empirically determined indel distribution in simulations of protein evolutionQ24814229
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal OmegaQ27860809
Gaps as characters in sequence-based phylogenetic analysesQ29614997
Multiple sequence alignment.Q30354248
The Diagram, a Method for Comparing Sequences. Its Use with Amino Acid and Nucleotide SequencesQ33391059
SuiteMSA: visual tools for multiple sequence alignment comparison and molecular sequence simulationQ33907207
An alignment confidence score capturing robustness to guide tree uncertaintyQ34014420
Incorporating gaps as phylogenetic characters across eight DNA regions: ramifications for North American Psoraleeae (Leguminosae).Q34718338
INDELible: a flexible simulator of biological sequence evolutionQ34979731
Structural homology guided alignment of cysteine rich proteinsQ35898674
P4510describes a project that usesR packageQ73539779
P433issue1
P921main subjectsequence alignmentQ827246
sequence analysisQ1154615
multiple sequence alignmentQ1377767
R packageQ73539779
P1104number of pages6
P304page(s)434
P577publication date2016-10-26
P1433published inBMC BioinformaticsQ4835939
P1476titleAlignStat: a web-tool and R package for statistical comparison of alternative multiple sequence alignments
P478volume17

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