Whole genome sequencing of Guzerá cattle reveals genetic variants in candidate genes for production, disease resistance, and heat tolerance

scientific article

Whole genome sequencing of Guzerá cattle reveals genetic variants in candidate genes for production, disease resistance, and heat tolerance is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1007/S00335-016-9670-7
P698PubMed publication ID27853861

P50authorGuilherme OliveiraQ38326817
Maria Raquel S CarvalhoQ58894770
Adhemar ZerlotiniQ91436615
P2093author name stringRoney S Coimbra
Marco A Machado
Anderson J Dominitini
Francislon S Oliveira
Laura R Leite
Rui S Verneque
Beatriz C Lopes
Angela Volpini
Flávio Araujo
Izinara C Rosse
Juliana G Assis
Marcos V G B Silva
Maria G C D Peixoto
Marta F Martins
Wagner A Arbex
P2860cites workGenBankQ21056874
Comparative genomics and evolution of the HSP90 family of genes across all kingdoms of organismsQ21266601
Comparison of next-generation sequencing systemsQ21296690
Predicting deleterious amino acid substitutionsQ22065761
The genome sequence of taurine cattle: a window to ruminant biology and evolutionQ22065853
Genome Sequence and Assembly of Bos indicusQ22066029
Database resources of the National Center for Biotechnology InformationQ22680374
A quarter century of granzymesQ24613762
Ongoing and future developments at the Universal Protein ResourceQ24616298
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breedsQ24644908
The human genome browser at UCSCQ24672361
Basic local alignment search toolQ25938991
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
The Sequence Alignment/Map format and SAMtoolsQ27860966
A simple salting out procedure for extracting DNA from human nucleated cellsQ27861086
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene listsQ28131785
Ensembl 2012Q28253062
Characterization of Abcc4 gene amplification in stepwise-selected mouse J774 macrophages resistant to the topoisomerase II inhibitor ciprofloxacinQ28478263
Massively parallel sequencing of Chikso (Korean brindle cattle) to discover genome-wide SNPs and InDelsQ28660720
Mitogen-activated protein (MAP) kinase pathways: regulation and physiological functionsQ29547189
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assemblerQ29616805
KAAS: an automatic genome annotation and pathway reconstruction serverQ29617232
A whole-genome assembly of the domestic cow, Bos taurusQ29618160
Gut microbiota, tight junction protein expression, intestinal resistance, bacterial translocation and mortality following cholestasis depend on the genetic background of the hostQ30412140
Whole-genome resequencing shows numerous genes with nonsynonymous SNPs in the Japanese native cattle Kuchinoshima-UshiQ30476520
Large and linked in scientific publishingQ30486092
Animal QTLdb: an improved database tool for livestock animal QTL/association data dissemination in the post-genome era.Q30578497
Genes contributing to prion pathogenesisQ33687685
Granzyme A activates another way to dieQ34002316
Global assessment of genomic variation in cattle by genome resequencing and high-throughput genotypingQ34074180
Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discoveryQ34075015
Differentiation and persistence of memory CD8(+) T cells depend on T cell factor 1Q34085034
In-depth annotation of SNPs arising from resequencing projects using NGS-SNPQ34194748
The kidney tight junction (Review).Q34426889
Tumor necrosis factor alpha and inflammation disrupt the polarity complex in intestinal epithelial cells by a posttranslational mechanismQ34528504
Sod1 deficiency reduces incubation time in mouse models of prion diseaseQ34563121
Comparison of sequencing platforms for single nucleotide variant calls in a human sampleQ34584099
Genome-wide association study of infectious bovine keratoconjunctivitis in Angus cattleQ34636514
Comparative Transcriptome Analysis of Adipose Tissues Reveals that ECM-Receptor Interaction Is Involved in the Depot-Specific Adipogenesis in CattleQ34785292
Activation of the mitogen-activated protein kinase pathways by heat shockQ34966153
Left displacement of the abomasum in dairy cattle: recent developments in epidemiological and etiological aspectsQ35067229
Polymorphisms in the bovine HSP90AB1 gene are associated with heat tolerance in Thai indigenous cattleQ35788637
Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattleQ35974041
The UCSC Genome Browser database: 2016 updateQ36434956
Mechanisms of activation and regulation of the heat shock-sensitive signaling pathwaysQ36700320
Infectious bovine keratoconjunctivitis antimicrobial therapy.Q36735692
In vitro prevention of salmonella lipopolysaccharide-induced damages in epithelial barrier function by various lactobacillus strainsQ36948517
Catharanthus roseus mitogen-activated protein kinase 3 confers UV and heat tolerance to Saccharomyces cerevisiaeQ37100248
Lessons for livestock genomics from genome and transcriptome sequencing in cattle and other mammalsQ37185266
Whole genome sequencing of a single Bos taurus animal for single nucleotide polymorphism discoveryQ37350828
Systematic review of the prevalence of paratuberculosis in cattle, sheep, and goats in Latin America and the Caribbean.Q38244461
Physiological responses of Bos taurus and Bos indicus cattle to prolonged, continuous heat and humidityQ38574529
Whole genome sequencing of Gir cattle for identifying polymorphisms and loci under selectionQ39178693
A critical role for granzymes in antigen cross-presentation through regulating phagocytosis of killed tumor cells.Q39516978
Unsaturated fatty acids induce cytotoxic aggregate formation of amyotrophic lateral sclerosis-linked superoxide dismutase 1 mutants.Q40440970
Effect of season and high environmental temperature on fertility of Holstein cattleQ42663303
Detection of signatures of selective sweeps in the Blonde d'Aquitaine cattle breed.Q44254927
Informed and automated k-mer size selection for genome assemblyQ45135419
Whole-Genome association analysis of susceptibility to paratuberculosis in Holstein cattleQ45783020
Genome-wide association analysis identifies loci for left-sided displacement of the abomasum in German Holstein cattleQ45845424
Depletion of BIRC6 leads to retarded bovine early embryonic development and blastocyst formation in vitroQ48704729
Identification of SNP in HSP90AB1 and its association with the relative thermotolerance and milk production traits in Indian dairy cattle.Q51702036
Next generation sequencing of African and Indicine cattle to identify single nucleotide polymorphismsQ57278751
Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencingQ57808526
Genetic mapping of quantitative trait loci for meat quality and muscle metabolic traits in cattleQ61820197
Quantitative trait loci for organ weights and adipose fat composition in Jersey and Limousin back-cross cattle finished on pasture or feedlotQ61820198
Risk factors for abomasal volvulus and left abomasal displacement in cattleQ68008205
Interactions of Climatic Factors Affecting Milk Yield and CompositionQ68370132
Heat tolerance of Boran and Tuli crossbred steersQ73007827
Influence of short- and long-term exposure to a hot environment on rumen passage rate and diet digestibility by Friesian heifersQ77793835
Pedigree analysis in the Brazilian Zebu breedsQ83556015
Assessing the heat tolerance of 17 beef cattle genotypesQ83875489
P433issue1-2
P921main subjectwhole genome sequencingQ2068526
P1104number of pages15
P304page(s)66-80
P577publication date2016-11-16
P1433published inMammalian GenomeQ1348949
P1476titleWhole genome sequencing of Guzerá cattle reveals genetic variants in candidate genes for production, disease resistance, and heat tolerance
P478volume28

Reverse relations

Q57284359Genetic mechanisms underlying spermatic and testicular traits within and among cattle breeds: systematic review and prioritization of GWAS resultscites workP2860

Search more.