Comparative analysis of Corynebacterium glutamicum genomes: a new perspective for the industrial production of amino acids

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Comparative analysis of Corynebacterium glutamicum genomes: a new perspective for the industrial production of amino acids is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1074234894
P356DOI10.1186/S12864-016-3255-4
P2888exact matchhttps://scigraph.springernature.com/pub.10.1186/s12864-016-3255-4
P932PMC publication ID5310272
P698PubMed publication ID28198668

P2093author name stringSheng Yang
Junjie Yang
P2860cites workTransfer of Brevibacterium divaricatum DSM 20297T, "Brevibacterium flavum" DSM 20411, "Brevibacterium lactofermentum" DSM 20412 and DSM 1412, and Corynebacterium lilium DSM 20137T to Corynebacterium glutamicum and Their Distinction by rRNA Gene Re...Q45311942
Effect of odhA overexpression and odhA antisense RNA expression on Tween-40-triggered glutamate production by Corynebacterium glutamicumQ46314463
Purification and characterization of glutamate dehydrogenase. from Corynebacterium glutamicum S9114Q46561161
Metabolic engineering of Corynebacterium glutamicum for L-arginine productionQ47989578
Comparative analysis of the Corynebacterium glutamicum group and complete genome sequence of strain R.Q48080676
MEGA (Multiple Essential Genes Assembling) deletion and replacement method for genome reduction in Escherichia coli.Q51385598
Metabolic engineering of Corynebacterium glutamicum for the production of itaconate.Q53201322
Next-generation sequencing-based genome-wide mutation analysis of L-lysine-producing Corynebacterium glutamicum ATCC 21300 strain.Q53354822
Improvement of L-arginine production by overexpression of a bifunctional ornithine acetyltransferase in Corynebacterium crenatum.Q54356482
L-Serine overproduction with minimization of by-product synthesis by engineered Corynebacterium glutamicumQ86081341
Effect of cofactor folate on the growth of Corynebacterium glutamicum SYPS-062 and L-serine accumulationQ87947552
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencingQ24629733
Fast and accurate short read alignment with Burrows-Wheeler transformQ24653853
CVTree update: a newly designed phylogenetic study platform using composition vectors and whole genomesQ24655479
Versatile and open software for comparing large genomesQ24807126
Structural insights into domain movement and cofactor specificity of glutamate dehydrogenase from Corynebacterium glutamicumQ27698070
The Sequence Alignment/Map format and SAMtoolsQ27860966
Engineering Corynebacterium glutamicum for the production of 2,3-butanediolQ28608330
Fast and accurate long-read alignment with Burrows-Wheeler transformQ29547193
Trimmomatic: a flexible trimmer for Illumina sequence dataQ29547278
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3Q29614852
Shifting the genomic gold standard for the prokaryotic species definitionQ29616599
Prokka: rapid prokaryotic genome annotationQ29616643
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotesQ29616745
The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032.Q33237112
Succinate production from CO₂-grown microalgal biomass as carbon source using engineered Corynebacterium glutamicum through consolidated bioprocessingQ33941961
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitaminsQ33968067
Genome sequence-based species delimitation with confidence intervals and improved distance functionsQ34329280
Multilocus sequence typing identifies evidence for recombination and two distinct lineages of Corynebacterium diphtheriaeQ34489535
The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strainsQ34558774
Assembling single-cell genomes and mini-metagenomes from chimeric MDA productsQ35007840
The Corynebacterium glutamicum genome: features and impacts on biotechnological processesQ35126149
PGAP: pan-genomes analysis pipelineQ35708459
Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproductionQ37210160
PanGP: a tool for quickly analyzing bacterial pan-genome profileQ37720715
Postgenomic approaches to using corynebacteria as biocatalysts.Q38026889
Genome sequence of Corynebacterium glutamicum S9114, a strain for industrial production of glutamateQ38724826
Double mutation of cell wall proteins CspB and PBP1a increases secretion of the antibody Fab fragment from Corynebacterium glutamicum.Q39623748
QUAST: quality assessment tool for genome assembliesQ39805869
Genome sequence of Corynebacterium glutamicum ATCC 14067, which provides insight into amino acid biosynthesis in coryneform bacteriaQ40596740
Complete genome sequence of Corynebacterium glutamicum B253, a Chinese lysine-producing strainQ40962981
Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumoniaQ41866629
Efficient aerobic succinate production from glucose in minimal medium with Corynebacterium glutamicumQ42006094
Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 for use as a platform strain for basic research and industrial biotechnologyQ42039738
Tablet--next generation sequence assembly visualizationQ42144683
Exploring single-sample SNP and INDEL calling with whole-genome de novo assemblyQ42225532
Chassis organism from Corynebacterium glutamicum--a top-down approach to identify and delete irrelevant gene clustersQ43187766
FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference ProgramQ43245152
P4510describes a project that usesMUMmerQ6719063
P433issueSuppl 1
P407language of work or nameEnglishQ1860
P921main subjectCorynebacterium glutamicumQ292314
P304page(s)940
P577publication date2017-01-25
P1433published inBMC GenomicsQ15765854
P1476titleComparative analysis of Corynebacterium glutamicum genomes: a new perspective for the industrial production of amino acids
P478volume18

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Q48539588A Novel l-Glutamate Exporter of Corynebacterium glutamicum.
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Q47596985Effects of EGTA on cell surface structures of Corynebacterium glutamicum
Q64900394GREACE-assisted adaptive laboratory evolution in endpoint fermentation broth enhances lysine production by Escherichia coli.
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Q48125360Impact of mycolic acid deficiency on cells of Corynebacterium glutamicum ATCC13869.
Q64991677Metabolic engineering of Corynebacterium glutamicum S9114 based on whole-genome sequencing for efficient N-acetylglucosamine synthesis.
Q55443694Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) co-produced with L-isoleucine in Corynebacterium glutamicum WM001.
Q90423866Reconstructing the Phylogeny of Corynebacteriales While Accounting for Horizontal Gene Transfer
Q59797453Stable integration of the Mrx1-roGFP2 biosensor to monitor dynamic changes of the mycothiol redox potential in Corynebacterium glutamicum

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