Breaking symmetry in protein dimers: designs and functions

scientific article

Breaking symmetry in protein dimers: designs and functions is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1110/PS.051658406
P932PMC publication ID2242361
P698PubMed publication ID16373473
P5875ResearchGate publication ID7398660

P2093author name stringJerry H Brown
P2860cites workImproved methods for building protein models in electron density maps and the location of errors in these modelsQ26776980
Structure of active site carboxymethylated D-glyceraldehyde-3-phosphate dehydrogenase from Palinurus versicolorQ27617795
The tetramerization domain of the Mnt repressor consists of two right-handed coiled coilsQ27619209
Crystal structure of a murine glutathione S-transferase in complex with a glutathione conjugate of 4-hydroxynon-2-enal in one subunit and glutathione in the other: evidence of signaling across the dimer interfaceQ27619850
The solution structure of VAT-N reveals a 'missing link' in the evolution of complex enzymes from a simple betaalphabetabeta elementQ27620039
The crystal structure of modified bovine fibrinogenQ27620838
Insights into the mechanisms of catalysis and heterotropic regulation of Escherichia coli aspartate transcarbamoylase based upon a structure of the enzyme complexed with the bisubstrate analogue N-phosphonacetyl-L-aspartate at 2.1 AQ27621102
2.9 Å crystal structure of ligand-free tryptophanyl-tRNA synthetase: Domain movements fragment the adenine nucleotide binding siteQ27621756
The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridgesQ27622007
Structure of the reovirus core at 3.6 A resolutionQ27622391
Crystal structure of the amino-terminal coiled-coil domain of the APC tumor suppressorQ27625761
The beta-slip: a novel concept in transthyretin amyloidosisQ27628857
Deciphering the design of the tropomyosin moleculeQ27632998
Crystal structure of the central region of bovine fibrinogen (E5 fragment) at 1.4-A resolutionQ27635320
Dimer formation drives the activation of the cell death protease caspase 9Q27636617
The crystal structure of the C-terminal fragment of striated-muscle alpha-tropomyosin reveals a key troponin T recognition siteQ27639037
Structural basis of the adaptive molecular recognition by MMP9Q27639383
The crystal structure of fragment double-D from cross-linked lamprey fibrin reveals isopeptide linkages across an unexpected D-D interfaceQ27640245
The Alacoil: a very tight, antiparallel coiled-coil of helicesQ36278970
Mechanisms of cooperativity and allosteric regulation in proteinsQ38692121
Half-site reactivityQ39901424
Bacterial motility and the bacterial flagellar motorQ40181899
Quasi-equivalent viruses: a paradigm for protein assembliesQ41531606
A piston model for transmembrane signaling of the aspartate receptorQ41689679
Determinants of strand register in antiparallel beta-sheets of proteinsQ42006079
Structure of simian virus 40 at 3.8-A resolutionQ45861692
Sequence and structural differences between enzyme and nonenzyme homologsQ47423196
Construction of bacterial flagellaQ50229179
Principles of helix-helix packing in proteins: the helical lattice superposition model.Q52312544
An analysis of side chain interactions and pair correlations within antiparallel beta-sheets: the differences between backbone hydrogen-bonded and non-hydrogen-bonded residue pairs.Q52340732
The structure of interfaces between subunits of dimeric and tetrameric proteinsQ69398893
Mechanisms of domain closure in proteinsQ70340475
Kinetic differentiation between ligand-induced and pre-existent asymmetric modelsQ71130376
Collagen stabilization at atomic level: crystal structure of designed (GlyProPro)10foldonQ27640648
Structure of a C-type mannose-binding protein complexed with an oligosaccharideQ27642164
Structure of the Calcium-Dependent Lectin Domain from a Rat Mannose-Binding Protein Determined by MAD PhasingQ27643496
X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coilQ27655682
Crystal structure of the complex of phosphofructokinase from Escherichia coli with its reaction productsQ27728506
Structure of the ColE1 rop protein at 1.7 A resolutionQ27728853
Structure of the human ADP-ribosylation factor 1 complexed with GDPQ27730791
The crystal structure of C-C-A-T-T-A-A-T-G-G. Implications for bending of B-DNA at T-A stepsQ27731407
Crystal structure of a PUT3-DNA complex reveals a novel mechanism for DNA recognition by a protein containing a Zn2Cys6 binuclear clusterQ27744031
Crystal structures of fragment D from human fibrinogen and its crosslinked counterpart from fibrinQ27745853
Structure of a HAP1-DNA complex reveals dramatically asymmetric DNA binding by a homodimeric proteinQ27766471
Principles of protein-protein interactionsQ27860855
ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODELQ27861036
Physical Principles in the Construction of Regular VirusesQ28190647
Principles that govern the folding of protein chainsQ28236872
Backbone-dependent rotamer library for proteins. Application to side-chain predictionQ28267713
Structures of class A macrophage scavenger receptors. Electron microscopic study of flexible, multidomain, fibrous proteins and determination of the disulfide bond pattern of the scavenger receptor cysteine-rich domainQ28295407
Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classesQ28305615
Transmembrane signaling in bacterial chemoreceptorsQ28362211
Asymmetry adjacent to the collagen-like domain in rat liver mannose-binding proteinQ28564917
Coiled coils: new structures and new functionsQ29555849
Comparison of Experimental Binding Data and Theoretical Models in Proteins Containing Subunits*Q29615452
Structural basis for activation of ARF GTPase: mechanisms of guanine nucleotide exchange and GTP-myristoyl switchingQ29620513
Polar zipper sequence in the high-affinity hemoglobin of Ascaris suum: amino acid sequence and structural interpretationQ30195377
A tale of two polymers: new insights into helical filamentsQ30311136
Constraints on the assembly of spherical virus particlesQ30413869
Actin-destabilizing factors disrupt filaments by means of a time reversal of polymerizationQ30435379
Interdomain interactions in oligomeric enzymes: creation of asymmetry in homo-oligomers and role in metabolite channeling between active centers of hetero-oligomersQ31860650
Allosteric proteins and cellular control systemsQ33970893
Structural symmetry and protein functionQ34001342
Tomato bushy stunt virus at 2.9 A resolutionQ34019105
Polyglutamine fibrillogenesis: the pathway unfoldsQ34466014
Local rule-based theory of virus shell assemblyQ35661201
Polar zippers: their role in human diseaseQ36278332
P433issue1
P304page(s)1-13
P577publication date2006-01-01
P1433published inProtein ScienceQ7251445
P1476titleBreaking symmetry in protein dimers: designs and functions
P478volume15

Reverse relations

cites work (P2860)
Q27437831Alanine zipper-like coiled-coil domains are necessary for homotypic dimerization of plant GAGA-factors in the nucleus and nucleolus
Q48240350Analysis of the HIV-2 protease's adaptation to various ligands: characterization of backbone asymmetry using a structural alphabet
Q64980510Anti-Correlation between the Dynamics of the Active Site Loop and C-Terminal Tail in Relation to the Homodimer Asymmetry of the Mouse Erythroid 5-Aminolevulinate Synthase.
Q27678431Bicaudal-D uses a parallel, homodimeric coiled coil with heterotypic registry to coordinate recruitment of cargos to dynein
Q36457132Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics
Q47106289Conserved asymmetry underpins homodimerization of Dicer-associated double-stranded RNA-binding proteins
Q24657449Crystal structure of rhodocytin, a ligand for the platelet-activating receptor CLEC-2
Q27659543Crystal structure of the bifunctional proline utilization A flavoenzyme from Bradyrhizobium japonicum
Q34281651Extent of structural asymmetry in homodimeric proteins: prevalence and relevance
Q41814804How sequence directs bending in tropomyosin and other two-stranded alpha-helical coiled coils
Q37644684Minimal intervention needed for change: definition, use, and value for improving health and health research
Q53621988Monte Carlo calculations of energy deposition distributions of electrons below 20 keV in protein.
Q37213786Pre-existent asymmetry in the human cyclooxygenase-2 sequence homodimer
Q84801600Protein homomers in point‐group assembly: Symmetry making and breaking are specific and distinctive in their codes of chemical alphabet in side chains
Q26766142Sequence co-evolutionary information is a natural partner to minimally-frustrated models of biomolecular dynamics
Q36003820Soluble monomeric IgG1 Fc.
Q30359226Striatins contain a noncanonical coiled coil that binds protein phosphatase 2A A subunit to form a 2:2 heterotetrameric core of striatin-interacting phosphatase and kinase (STRIPAK) complex.
Q47570652Structural and evolutionary versatility in protein complexes with uneven stoichiometry
Q34421180Structural attributes for the recognition of weak and anomalous regions in coiled-coils of myosins and other motor proteins
Q27684600Structural basis of the heterodimerization of the MST and RASSF SARAH domains in the Hippo signalling pathway
Q27644004Structure and Kinetics of Monofunctional Proline Dehydrogenase from Thermus thermophilus
Q41830332Structure and mechanism of the bifunctional CinA enzyme from Thermus thermophilus
Q29994698Symmetry breaking during homodimeric assembly activates an E3 ubiquitin ligase
Q24300755The Mad2 conformational dimer: structure and implications for the spindle assembly checkpoint
Q95319724The near-symmetry of protein oligomers: NMR-derived structures
Q33609827The two active sites of Thermotoga maritima CheA dimers bind ATP with dramatically different affinities
Q40092483What makes tropomyosin an actin binding protein? A perspective

Search more.