| review article | Q7318358 |
| scholarly article | Q13442814 |
| P50 | author | Björn Voss | Q56999237 |
| Robert Giegerich | Q102176686 | ||
| P2093 | author name string | Jens Reeder | |
| Marc Rehmsmeier | |||
| Matthias Höchsmann | |||
| P2860 | cites work | Identification of Drosophila MicroRNA targets | Q21146437 |
| Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics | Q21284292 | ||
| Fast and effective prediction of microRNA/target duplexes | Q24537313 | ||
| RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble | Q24537445 | ||
| A comprehensive comparison of comparative RNA structure prediction approaches | Q24561451 | ||
| Abstract shapes of RNA | Q24564555 | ||
| Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information | Q24602467 | ||
| A statistical sampling algorithm for RNA secondary structure prediction | Q24617509 | ||
| Rfam: an RNA family database | Q24682045 | ||
| Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction | Q24802528 | ||
| A three-stemmed mRNA pseudoknot in the SARS coronavirus frameshift signal | Q24803069 | ||
| Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure | Q27860806 | ||
| Vienna RNA secondary structure server | Q28131816 | ||
| Dynalign: an algorithm for finding the secondary structure common to two RNA sequences | Q28208082 | ||
| The equilibrium partition function and base pair binding probabilities for RNA secondary structure | Q28261689 | ||
| On the complexity of multiple sequence alignment | Q28288844 | ||
| A dynamic programming algorithm for RNA structure prediction including pseudoknots | Q28295782 | ||
| Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods | Q30051266 | ||
| RNA pseudoknot prediction in energy-based models | Q33927406 | ||
| Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction | Q34434090 | ||
| Local similarity in RNA secondary structures. | Q34490679 | ||
| Pure multiple RNA secondary structure alignments: a progressive profile approach | Q34574782 | ||
| Finding the most significant common sequence and structure motifs in a set of RNA sequences | Q34635992 | ||
| An RNA folding method capable of identifying pseudoknots and base triples. | Q48711789 | ||
| A heuristic approach for detecting RNA H-type pseudoknots. | Q50746549 | ||
| Secondary structure prediction of interacting RNA molecules. | Q51980593 | ||
| Complete suboptimal folding of RNA and the stability of secondary structures. | Q52222269 | ||
| P433 | issue | 1 | |
| P921 | main subject | bioinformatics | Q128570 |
| computational biology | Q177005 | ||
| P304 | page(s) | 41-55 | |
| P577 | publication date | 2006-03-10 | |
| 2006-06-25 | |||
| P1433 | published in | Journal of Biotechnology | Q6294860 |
| P1476 | title | Beyond Mfold: recent advances in RNA bioinformatics | |
| P478 | volume | 124 |
| Q90623146 | An Evolutionary Trace method defines functionally important bases and sites common to RNA families |
| Q34019804 | Annexin A2 binds RNA and reduces the frameshifting efficiency of infectious bronchitis virus |
| Q38961905 | Bridging the gap between in vitro and in vivo RNA folding |
| Q26851744 | Candidate gene association studies: a comprehensive guide to useful in silico tools |
| Q36929494 | Computational methods in noncoding RNA research |
| Q36691431 | ConStruct: Improved construction of RNA consensus structures |
| Q47795932 | Conditioning and Robustness of RNA Boltzmann Sampling under Thermodynamic Parameter Perturbations. |
| Q34801786 | Deciphering the rules by which 5'-UTR sequences affect protein expression in yeast |
| Q35089028 | Detecting riboSNitches with RNA folding algorithms: a genome-wide benchmark |
| Q28475210 | Disease-associated mutations that alter the RNA structural ensemble |
| Q34324956 | Evaluating our ability to predict the structural disruption of RNA by SNPs |
| Q33562602 | Evaluation of the information content of RNA structure mapping data for secondary structure prediction |
| Q30402159 | Fully differentiable coarse-grained and all-atom knowledge-based potentials for RNA structure evaluation |
| Q36343097 | GARN2: coarse-grained prediction of 3D structure of large RNA molecules by regret minimization |
| Q35757341 | GARN: Sampling RNA 3D Structure Space with Game Theory and Knowledge-Based Scoring Strategies |
| Q41221603 | Heuristic RNA pseudoknot prediction including intramolecular kissing hairpins |
| Q36870445 | Informatics challenges in structured RNA. |
| Q50494235 | Inhibition of HIV-1 Integrase gene expression by 10-23 DNAzyme. |
| Q34664125 | MicroRNA-mediated regulation of stomatal development in Arabidopsis |
| Q26766167 | New insights from cluster analysis methods for RNA secondary structure prediction |
| Q24602908 | Predicting pseudoknotted structures across two RNA sequences |
| Q37142084 | Predicting structures and stabilities for H-type pseudoknots with interhelix loops. |
| Q33299471 | Prediction of RNA pseudoknots using heuristic modeling with mapping and sequential folding |
| Q24649838 | R-Coffee: a method for multiple alignment of non-coding RNA |
| Q30361513 | RE-MuSiC: a tool for multiple sequence alignment with regular expression constraints. |
| Q36798894 | RNA localization signals: deciphering the message with bioinformatics |
| Q42030005 | RNA structure prediction from evolutionary patterns of nucleotide composition |
| Q33301063 | RNAspa: a shortest path approach for comparative prediction of the secondary structure of ncRNA molecules |
| Q34138663 | SHAPE-directed RNA secondary structure prediction |
| Q52751411 | Structural characterization of the internal transcribed spacer 2 (ITS2) of the ribosomal DNA (rDNA) cluster in Calyptratae (Diptera: Schizophora) and its implications for molecular phylogenetic analyses. |
| Q33863245 | Using the RNAstructure Software Package to Predict Conserved RNA Structures |
Search more.