Comparative and functional genomics reveals genetic diversity and determinants of host specificity among reference strains and a large collection of Chinese isolates of the phytopathogen Xanthomonas campestris pv. campestris

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Comparative and functional genomics reveals genetic diversity and determinants of host specificity among reference strains and a large collection of Chinese isolates of the phytopathogen Xanthomonas campestris pv. campestris is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1035716708
P356DOI10.1186/GB-2007-8-10-R218
P2888exact matchhttps://scigraph.springernature.com/pub.10.1186/gb-2007-8-10-r218
P932PMC publication ID2246292
P698PubMed publication ID17927820
P5875ResearchGate publication ID5917025

P2093author name stringLiang Zhang
Wei Jiang
Jing Cheng
Xia Zhang
Jing Qin
Baoshan Chen
Bo-Le Jiang
Dong-Jie Tang
Guang-Tao Lu
Ji-Liang Tang
Jia-Xun Feng
Yong-Qiang He
Jie Liao
Xiao-Xia Liang
Sui-Sheng Zhang
Rong-Qi Xu
Jin-Ru Cao
Mei-Liang Wei
Zheng-Chun Zhang
P2860cites workVariation suggestive of horizontal gene transfer at a lipopolysaccharide (lps) biosynthetic locus in Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen of riceQ21263090
Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome SequenceQ22065447
Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestrisQ22065748
The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of riceQ22065983
Comparison of the genomes of two Xanthomonas pathogens with differing host specificitiesQ22122346
Genome sequence of the plant pathogen Ralstonia solanacearumQ22122347
Lateral gene transfer and the nature of bacterial innovationQ22122396
Xanthomonas campestris pv. campestris gum mutants: effects on xanthan biosynthesis and plant virulenceQ24520723
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolutionQ24555229
Integrons in Xanthomonas: a source of species genome diversityQ24555753
Cluster analysis and display of genome-wide expression patternsQ24644463
Prophage genomicsQ24673108
Detection and characterization of horizontal transfers in prokaryotes using genomic signatureQ24794583
A new approach for the analysis of bacterial microarray-based Comparative Genomic Hybridization: insights from an empirical studyQ24815083
A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteriaQ25255909
Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variationQ27860759
The bases of crown gall tumorigenesisQ28492358
Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicumQ29615259
Comparative genomics of BCG vaccines by whole-genome DNA microarrayQ29618558
Genomic approaches in Xanthomonas campestris pv. vesicatoria allow fishing for virulence genesQ30320538
Data rotation improves genomotyping efficiencyQ33223338
Cloning of genes involved in pathogenicity of Xanthomonas campestris pv. campestris using the broad host range cosmid pLAFR1.Q33232926
Xanthomonas campestrisContains a Cluster ofhrpGenes Related to the LargerhrpCluster ofPseudomonas solanacearumQ33241847
Genomic structure and phylogeny of the plant pathogen Ralstonia solanacearum inferred from gene distribution analysis.Q33262738
Comparative genomic hybridizations reveal genetic regions within the Mycobacterium avium complex that are divergent from Mycobacterium avium subsp. paratuberculosis isolatesQ33716730
Xanthomonas campestris pv. campestris possesses a single gluconeogenic pathway that is required for virulenceQ33937690
Molecular evolution of virulence in natural field strains of Xanthomonas campestris pv. vesicatoriaQ33995093
Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factorQ34013057
Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transpositionQ34048373
oriC region and replication termination site, dif, of the Xanthomonas campestris pv. campestris 17 chromosomeQ34055006
Whole-genome comparative analysis of three phytopathogenic Xylella fastidiosa strainsQ34156241
Microarrays for microbiologistsQ34272421
Extensive genomic diversity in pathogenic Escherichia coli and Shigella Strains revealed by comparative genomic hybridization microarrayQ34351036
Biogenesis, architecture, and function of bacterial type IV secretion systemsQ34449723
Type IV secretion and Brucella virulenceQ34987724
Microarray analyses of Xylella fastidiosa provide evidence of coordinated transcription control of laterally transferred elements.Q34994603
Spontaneous and induced mutations in a single open reading frame alter both virulence and avirulence in Xanthomonas campestris pv. vesicatoria avrBs2.Q35610606
Genomic islands in pathogenic and environmental microorganismsQ35752419
A whole-genome microarray reveals genetic diversity among Helicobacter pylori strainsQ35852799
Protein secretion in Legionella pneumophila and its relation to virulence.Q35883180
Biofilm dispersal in Xanthomonas campestris is controlled by cell-cell signaling and is required for full virulence to plantsQ35978792
A 3.9-kb DNA region of Xanthomonas campestris pv. campestris that is necessary for lipopolysaccharide production encodes a set of enzymes involved in the synthesis of dTDP-rhamnoseQ36124599
Characterization and virulence properties of Erwinia chrysanthemi lipopolysaccharide-defective, phi EC2-resistant mutantsQ36264332
Comparative studies of lipopolysaccharide and exopolysaccharide from a virulent strain of Pseudomonas solanacearum and from three avirulent mutants.Q36354151
cag, a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulence factorsQ37047617
Comparative genomics of insect-symbiotic bacteria: influence of host environment on microbial genome compositionQ37055007
Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors.Q37285616
Requirement of a mip-like gene for virulence in the phytopathogenic bacterium Xanthomonas campestris pv. campestrisQ37860529
DNA microarray-based genome comparison of a pathogenic and a nonpathogenic strain of Xylella fastidiosa delineates genes important for bacterial virulenceQ39247533
HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomesQ39790145
Genetics of xanthan production in Xanthomonas campestris: the xanA and xanB genes are involved in UDP-glucose and GDP-mannose biosynthesisQ39932904
Involvement of a plasmid-encoded type IV secretion system in the plant tissue watersoaking phenotype of Burkholderia cenocepaciaQ39964412
Biosynthesis of lipopolysaccharide O antigensQ40402932
Horizontal gene transfer: evidence and possible consequencesQ40613985
Characterization of the cis-acting regulatory element controlling HrpB-mediated activation of the type III secretion system and effector genes in Ralstonia solanacearum.Q40867634
New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer regionQ40958469
The avirulence gene avrBs1 from Xanthomonas campestris pv. vesicatoria encodes a 50-kD protein.Q42651857
The zinc uptake regulator Zur is essential for the full virulence of Xanthomonas campestris pv. campestrisQ42663337
Xanthomonas campestris pv. campestris lpsI and lpsJ genes encoding putative proteins with sequence similarity to the alpha- and beta-subunits of 3-oxoacid CoA-transferases are involved in LPS biosynthesisQ42668331
Lipopolysaccharide biosynthesis in Xanthomonas campestris pv. campestris: a cluster of 15 genes is involved in the biosynthesis of the LPS O-antigen and the LPS coreQ43758604
Novel genes involved in the regulation of pathogenicity factor production within the rpf gene cluster of Xanthomonas campestrisQ47865061
A locus determining pathogenicity of Xanthomonas campestris is involved in lipopolysaccharide biosynthesis.Q48071052
Deltarho-web, an online tool to assess composition similarity of individual nucleic acid sequences.Q51975215
[A virulence gene from Xanthomonas campestris pv. campestris homologous to the avrBs2 locus is recognized in race-specific reaction by two different resistance genes in Brassica plant species]Q53941746
Identification and Origin ofXanthomonas campestrispv.campestrisRaces and Related PathovarsQ56803728
Genetic and molecular analysis of a cluster of rpf genes involved in positive regulation of synthesis of extracellular enzymes and polysaccharide in Xanthomonas campestris pathovar campestrisQ58321112
The molecular genetics of virulence of Xanthomonas campestrisQ64449422
A cluster of mutations disrupt the avirulence but not the virulence function of AvrPtoQ73832119
A fast method for approximating maximum likelihoods of phylogenetic trees from nucleotide sequencesQ74297974
Clp upregulates transcription of engA gene encoding a virulence factor in Xanthomonas campestris by direct binding to the upstream tandem Clp sitesQ81849081
Mutagenesis of all eight avr genes in Xanthomonas campestris pv. campestris had no detected effect on pathogenicity, but one avr gene affected race specificityQ82550802
P433issue10
P921main subjectgenomicsQ222046
genetic diversityQ585259
functional genomicsQ1068690
host tropismQ1536273
Xanthomonas campestrisQ3753551
P304page(s)R218
P577publication date2007-01-01
P1433published inGenome BiologyQ5533480
P1476titleComparative and functional genomics reveals genetic diversity and determinants of host specificity among reference strains and a large collection of Chinese isolates of the phytopathogen Xanthomonas campestris pv. campestris
P478volume8

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cites work (P2860)
Q33493436A "repertoire for repertoire" hypothesis: repertoires of type three effectors are candidate determinants of host specificity in Xanthomonas
Q27667877A Component of the Xanthomonadaceae Type IV Secretion System Combines a VirB7 Motif with a N0 Domain Found in Outer Membrane Transport Proteins
Q37194632A host basal transcription factor is a key component for infection of rice by TALE-carrying bacteria.
Q30482750A two-genome microarray for the rice pathogens Xanthomonas oryzae pv. oryzae and X. oryzae pv. oryzicola and its use in the discovery of a difference in their regulation of hrp genes
Q37191752An adenosine kinase exists in Xanthomonas campestris pathovar campestris and is involved in extracellular polysaccharide production, cell motility, and virulence
Q92526712Bacteria-Killing Type IV Secretion Systems
Q36512278Characterization of the GntR family regulator HpaR1 of the crucifer black rot pathogen Xanthomonas campestris pathovar campestris
Q34402232Comparative and genetic analysis of the four sequenced Paenibacillus polymyxa genomes reveals a diverse metabolism and conservation of genes relevant to plant-growth promotion and competitiveness
Q35820100Complete sequence and detailed analysis of the first indigenous plasmid from Xanthomonas oryzae pv. oryzicola
Q37542383Establishment of an inducing medium for type III effector secretion in Xanthomonas campestris pv. campestris
Q92030154Flp, a Fis-like protein, contributes to the regulation of type III secretion and virulence processes in the phytopathogen Xanthomonas campestris pv. campestris
Q30318680Functional characterization of the Xcs and Xps type II secretion systems from the plant pathogenic bacterium Xanthomonas campestris pv vesicatoria
Q43095561Genome Sequences of Three Atypical Xanthomonas campestris pv. campestris Strains, CN14, CN15, and CN16.
Q37248338Genomic islands: tools of bacterial horizontal gene transfer and evolution
Q91846015HprKXcc is a serine kinase that regulates virulence in the Gram-negative phytopathogen Xanthomonas campestris
Q24631254Identification of four novel small non-coding RNAs from Xanthomonas campestris pathovar campestris
Q38621707Identification of new protein-coding genes with a potential role in the virulence of the plant pathogen Xanthomonas euvesicatoria.
Q33601870In planta gene expression analysis of Xanthomonas oryzae pathovar oryzae, African strain MAI1.
Q57710860Inference of the phylogenetic diversity and population structure of Xanthomonas campestris affecting Brassicaceae using a multilocus sequence typing-based approach
Q34452499Involvement of bacterial TonB-dependent signaling in the generation of an oligogalacturonide damage-associated molecular pattern from plant cell walls exposed to Xanthomonas campestris pv. campestris pectate lyases
Q36936300Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on arabidopsis revealed by association and reverse genetics.
Q37863459Pathogenomics of Xanthomonas: understanding bacterium-plant interactions
Q47294464Peptidoglycan hydrolysis mediated by the amidase AmiC and its LytM activator NlpD are critical for cell separation and virulence in the phytopathogen Xanthomonas campestris
Q89763249PilG and PilH antagonistically control flagellum-dependent and pili-dependent motility in the phytopathogen Xanthomonas campestris pv. campestris
Q58657130Role of the acquisition of a type 3 secretion system in the emergence of novel pathogenic strains of Xanthomonas
Q58768969RpfC regulates the expression of the key regulator hrpX of the hrp/T3SS system in Xanthomonas campestris pv. campestris
Q33843907Sensing and adhesion are adaptive functions in the plant pathogenic xanthomonads.
Q92999216Stenotrophomonas maltophilia Encodes a VirB/VirD4 Type IV Secretion System That Modulates Apoptosis in Human Cells and Promotes Competition against Heterologous Bacteria, Including Pseudomonas aeruginosa
Q24607783Structure and mechanism of GumK, a membrane-associated glucuronosyltransferase
Q58801781Systematic Functional Analysis of Sigma (σ) Factors in the Phytopathogen Reveals Novel Roles in the Regulation of Virulence and Viability
Q29346674The Zur of Xanthomonas campestris functions as a repressor and an activator of putative zinc homeostasis genes via recognizing two distinct sequences within its target promoters
Q57980257Type III secretion-dependent host defence elicitation and type III secretion-independent growth within leaves by Xanthomonas campestris pv. campestris
Q38268825Type IV Secretion System Is Not Involved in Infection Process in Citrus
Q43706485Xanthomonas campestris pv. campestris (cause of black rot of crucifers) in the genomic era is still a worldwide threat to brassica crops.
Q92531244Xanthomonas campestris sensor kinase HpaS co-opts the orphan response regulator VemR to form a branched two-component system that regulates motility

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