review article | Q7318358 |
scholarly article | Q13442814 |
P50 | author | Anireddy Reddy | Q117357278 |
P2860 | cites work | Initial sequencing and analysis of the human genome | Q21045365 |
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana | Q22122387 | ||
Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions | Q33564752 | ||
Autoregulation of FCA pre-mRNA processing controls Arabidopsis flowering time | Q39777519 | ||
The RNA-binding protein FCA is an abscisic acid receptor | Q46900381 | ||
P921 | main subject | alternative mRNA splicing, via spliceosome | Q21114084 |
P304 | page(s) | 267-294 | |
P577 | publication date | 2007-01-01 | |
P1433 | published in | Annual Review of Plant Biology | Q567367 |
P1476 | title | Alternative splicing of pre-messenger RNAs in plants in the genomic era. | |
P478 | volume | 58 |
Q50280883 | A Genomic View of Alternative Splicing of Long Non-coding RNAs during Rice Seed Development Reveals Extensive Splicing and lncRNA Gene Families. |
Q35022331 | A KH-domain RNA-binding protein interacts with FIERY2/CTD phosphatase-like 1 and splicing factors and is important for pre-mRNA splicing in Arabidopsis |
Q35921018 | A New Mutation, hap1-2, Reveals a C Terminal Domain Function in AtMago Protein and Its Biological Effects in Male Gametophyte Development in Arabidopsis thaliana |
Q46261079 | A Proteomic Approach to Investigate the Drought Response in the Orphan Crop Eragrostis tef. |
Q35655039 | A comparison of the low temperature transcriptomes of two tomato genotypes that differ in freezing tolerance: Solanum lycopersicum and Solanum habrochaites |
Q48065930 | A conserved unusual posttranscriptional processing mediated by short, direct repeated (SDR) sequences in plants. |
Q46158635 | A critical role for the TIFY motif in repression of jasmonate signaling by a stabilized splice variant of the JASMONATE ZIM-domain protein JAZ10 in Arabidopsis |
Q33938772 | A deep survey of alternative splicing in grape reveals changes in the splicing machinery related to tissue, stress condition and genotype |
Q46907196 | A genomic and expression compendium of the expanded PEBP gene family from maize |
Q38308704 | A homolog of splicing factor SF1 is essential for development and is involved in the alternative splicing of pre-mRNA in Arabidopsis thaliana |
Q80777996 | A maize CONSTANS-like gene, conz1, exhibits distinct diurnal expression patterns in varied photoperiods |
Q43965627 | A novel type III polyketide synthase encoded by a three-intron gene from Polygonum cuspidatum |
Q37187198 | A plant 5S ribosomal RNA mimic regulates alternative splicing of transcription factor IIIA pre-mRNAs |
Q39094965 | A proteomic approach reveals new actors of nodule response to drought in split-root grown pea plants. |
Q37831777 | A role for SR proteins in plant stress responses |
Q47243051 | A single ancient origin for prototypical serine/arginine-rich splicing factors |
Q27315231 | A survey of the sorghum transcriptome using single-molecule long reads |
Q34486597 | Abscisic acid (ABA) regulation of Arabidopsis SR protein gene expression |
Q33908492 | Allelic variation, alternative splicing and expression analysis of Psy1 gene in Hordeum chilense Roem. et Schult |
Q37691018 | Alternative Splicing in Plant Genes: A Means of Regulating the Environmental Fitness of Plants |
Q36222247 | Alternative Splicing of Barley Clock Genes in Response to Low Temperature |
Q30454935 | Alternative mRNA processing increases the complexity of microRNA-based gene regulation in Arabidopsis |
Q37465383 | Alternative splicing and gene duplication differentially shaped the regulation of isochorismate synthase in Populus and Arabidopsis. |
Q37222930 | Alternative splicing and tumor progression |
Q33327579 | Alternative splicing at NAGNAG acceptors in Arabidopsis thaliana SR and SR-related protein-coding genes |
Q37578769 | Alternative splicing during Arabidopsis flower development results in constitutive and stage-regulated isoforms |
Q34253127 | Alternative splicing expands the repertoire of dominant JAZ repressors of jasmonate signaling. |
Q33907782 | Alternative splicing in plant immunity |
Q36303822 | Alternative splicing in plants--coming of age. |
Q54403506 | Alternative splicing in the coding region of Ppo-A1 directly influences the polyphenol oxidase activity in common wheat (Triticum aestivum L.). |
Q33581699 | Alternative splicing in tomato pollen in response to heat stress |
Q30414157 | Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes |
Q37176348 | Alternative splicing of anciently exonized 5S rRNA regulates plant transcription factor TFIIIA. |
Q30275853 | Alternative splicing of basic chitinase gene PR3b in the low-nicotine mutants of Nicotiana tabacum L. cv. Burley 21 |
Q43253999 | Alternative splicing produces an H-protein with better substrate properties for the P-protein of glycine decarboxylase |
Q33403713 | Alternative splicing studies of the reactive oxygen species gene network in Populus reveal two isoforms of high-isoelectric-point superoxide dismutase |
Q51745880 | Alternative splicing, activation of cryptic exons and amino acid substitutions in carotenoid biosynthetic genes are associated with lutein accumulation in wheat endosperm. |
Q38079475 | Alternative splicing: a pivotal step between eukaryotic transcription and translation |
Q38567355 | An ALMT1 gene cluster controlling aluminum tolerance at the Alt4 locus of rye (Secale cereale L) |
Q34033867 | An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana |
Q33834991 | An interspecific plant hybrid shows novel changes in parental splice forms of genes for splicing factors |
Q33328476 | Analyses of in vivo interaction and mobility of two spliceosomal proteins using FRAP and BiFC. |
Q89966231 | Analysis of Alternative Splicing and Alternative Polyadenylation in Populus alba var. pyramidalis by Single-Molecular Long-Read Sequencing |
Q44637747 | Arabidopsis plants having defects in nonsense-mediated mRNA decay factors UPF1, UPF2, and UPF3 show photoperiod-dependent phenotypes in development and stress responses |
Q34279382 | Arginine methylation mediated by the Arabidopsis homolog of PRMT5 is essential for proper pre-mRNA splicing |
Q41880960 | At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana |
Q37160929 | Battle through signaling between wheat and the fungal pathogen Septoria tritici revealed by proteomics and phosphoproteomics. |
Q60659633 | BraSto, a Stowaway MITE from Brassica: recently active copies preferentially accumulate in the gene space |
Q89683071 | Brassica Rapa SR45a Regulates Drought Tolerance via the Alternative Splicing of Target Genes |
Q45347510 | CACTIN is an essential nuclear protein in Arabidopsis and may be associated with the eukaryotic spliceosome |
Q36373179 | CCA1 alternative splicing as a way of linking the circadian clock to temperature response in Arabidopsis |
Q79964123 | Case study for identification of potentially indel-caused alternative expression isoforms in the rice subspecies japonica and indica by integrative genome analysis |
Q35688294 | Cauliflower mosaic virus Transcriptome Reveals a Complex Alternative Splicing Pattern |
Q34344299 | Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control |
Q38513923 | Characterization and comparison of intron structure and alternative splicing between Medicago truncatula, Populus trichocarpa, Arabidopsis and rice |
Q34075926 | Characterization of EMU, the Arabidopsis homolog of the yeast THO complex member HPR1. |
Q35089571 | Characterization of Rubisco activase genes in maize: an α-isoform gene functions alongside a β-isoform gene. |
Q84952552 | Characterization of a viral synergism in the monocot Brachypodium distachyon reveals distinctly altered host molecular processes associated with disease |
Q34769399 | Characterization of transcriptional complexity during longissimus muscle development in bovines using high-throughput sequencing |
Q46751422 | Characterization of wound-responsive RNA-binding proteins and their splice variants in Arabidopsis |
Q57159344 | Chromosome-level reference genome and alternative splicing atlas of moso bamboo (Phyllostachys edulis) |
Q50197481 | Cloning and characterization of indole synthase (INS) and a putative tryptophan synthase α-subunit (TSA) genes from Polygonum tinctorium. |
Q34524888 | Cloning of a conserved receptor-like protein kinase gene and its use as a functional marker for homoeologous group-2 chromosomes of the triticeae species |
Q33716847 | Closing plant stomata requires a homolog of an aluminum-activated malate transporter. |
Q30372484 | Comparable contributions of structural-functional constraints and expression level to the rate of protein sequence evolution. |
Q33428776 | Comparative analysis indicates that alternative splicing in plants has a limited role in functional expansion of the proteome. |
Q45928680 | Comparative analysis of alternative splicing, alternative polyadenylation and the expression of the two KIN genes from cytoplasmic male sterility cabbage (Brassica oleracea L. var. capitata L.). |
Q34026146 | Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing |
Q59203365 | Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat |
Q35555385 | Comparative genomics of grass EST libraries reveals previously uncharacterized splicing events in crop plants |
Q60923491 | Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress |
Q34740039 | Comparisons of computational methods for differential alternative splicing detection using RNA-seq in plant systems |
Q38157823 | Complexity of the alternative splicing landscape in plants. |
Q36123002 | Comprehensive Transcriptome Profiling Reveals Long Noncoding RNA Expression and Alternative Splicing Regulation during Fruit Development and Ripening in Kiwifruit (Actinidia chinensis). |
Q44223371 | Comprehensive analysis of the homeodomain-leucine zipper IV transcription factor family in Cucumis sativus. |
Q43050683 | Conserved alternative splicing of Arabidopsis transthyretin-like determines protein localization and S-allantoin synthesis in peroxisomes |
Q42113620 | Contribution of the different omega-3 fatty acid desaturase genes to the cold response in soybean. |
Q37885101 | Coping with stresses: roles of calcium- and calcium/calmodulin-regulated gene expression |
Q39502381 | Core clock, SUB1, and ABAR genes mediate flooding and drought responses via alternative splicing in soybean |
Q33320238 | Cross-species EST alignments reveal novel and conserved alternative splicing events in legumes |
Q30837209 | De novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species |
Q35970681 | Deciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elements |
Q33543635 | Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome |
Q36300671 | Depletion of Arabidopsis SC35 and SC35-like serine/arginine-rich proteins affects the transcription and splicing of a subset of genes |
Q47266521 | Development of an in vitro pre-mRNA splicing assay using plant nuclear extract |
Q64079935 | Differential Alternative Splicing Genes in Response to Boron Deficiency in |
Q48108692 | Differential Gene Expression Profiles and Alternative Isoform Regulations in Gill of Nile Tilapia in Response to Acute Hypoxia |
Q94313369 | Differential SAGE analysis in Arabidopsis uncovers increased transcriptome complexity in response to low temperature |
Q43125981 | Dynamic nucleocytoplasmic shuttling of an Arabidopsis SR splicing factor: role of the RNA-binding domains |
Q34121558 | Ecotype dependent expression and alternative splicing of epithiospecifier protein (ESP) in Arabidopsis thaliana |
Q43032575 | Engineering Rubisco activase from thermophilic cyanobacteria into high-temperature sensitive plants. |
Q64904079 | Evolution of Alternative Splicing in Eudicots. |
Q35779098 | Exploration of alternative splicing events in ten different grapevine cultivars |
Q47204725 | Exploring the relationship between intron retention and chromatin accessibility in plants |
Q36287689 | Exploring the transcriptome of non-model oleaginous microalga Dunaliella tertiolecta through high-throughput sequencing and high performance computing. |
Q60297599 | Expression of aberrant forms of AUXIN RESPONSE FACTOR8 stimulates parthenocarpy in Arabidopsis and tomato |
Q35229385 | Extensive changes to alternative splicing patterns following allopolyploidy in natural and resynthesized polyploids |
Q46440958 | Features of evolutionarily conserved alternative splicing events between Brassica and Arabidopsis |
Q43664636 | Fine mapping of a major QTL for flag leaf width in rice, qFLW4, which might be caused by alternative splicing of NAL1. |
Q42424750 | Functional analysis of splice variant expression of MADS AFFECTING FLOWERING 2 of Arabidopsis thaliana |
Q37165189 | Functional analysis of the isoforms of an ABI3-like factor of Pisum sativum generated by alternative splicing |
Q41511986 | Functional characterisation of an intron retaining K(+) transporter of barley reveals intron-mediated alternate splicing |
Q37988328 | Functional markers in wheat: current status and future prospects |
Q50488507 | Gene replacements and insertions in rice by intron targeting using CRISPR-Cas9. |
Q38441478 | Genome-Wide Analysis of Alternative Splicing Provides Insights into Stress Adaptation of the Pacific Oyster |
Q50457104 | Genome-Wide Analysis of Heat-Sensitive Alternative Splicing in Physcomitrella patens. |
Q38456544 | Genome-wide analysis of alternative splicing events in Hordeum vulgare: Highlighting retention of intron-based splicing and its possible function through network analysis. |
Q33531938 | Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii |
Q28651125 | Genome-wide analysis of alternative splicing in Volvox carteri |
Q35181679 | Genome-wide analysis of alternative splicing of pre-mRNA under salt stress in Arabidopsis |
Q33745699 | Genome-wide analysis of light-regulated alternative splicing mediated by photoreceptors in Physcomitrella patens |
Q64235733 | Genome-wide characterization, molecular evolution and expression profiling of the metacaspases in potato ( L.) |
Q53594758 | Genome-wide identification and phylogenetic analysis of Family-1 UDP glycosyltransferases in maize (Zea mays). |
Q35219067 | Genome-wide identification of evolutionarily conserved alternative splicing events in flowering plants |
Q43597261 | Genome-wide identification of rice class I metallothionein gene: tissue expression patterns and induction in response to heavy metal stress |
Q39897650 | Genome-wide landscape of alternative splicing events in Brachypodium distachyon. |
Q35134212 | Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation. |
Q33560271 | Genome-wide mapping of alternative splicing in Arabidopsis thaliana |
Q33911844 | Genome-wide survey of Alternative Splicing in Sorghum Bicolor. |
Q57723003 | Genome-wide survey of alternative splicing in the grass Brachypodium distachyon: a emerging model biosystem for plant functional genomics |
Q33333642 | Genomic and bioinformatics analysis of human adenovirus type 37: new insights into corneal tropism |
Q41117516 | Genomic architecture and functional relationships of intronless, constitutively- and alternatively-spliced genes in Brachypodium distachyon. |
Q26768522 | Global Plant Stress Signaling: Reactive Oxygen Species at the Cross-Road |
Q46912463 | Global dissection of alternative splicing in paleopolyploid soybean |
Q38644886 | Host plant driven transcriptome plasticity in the salivary glands of the cabbage looper (Trichoplusia ni). |
Q30841136 | Hybrid sequencing and map finding (HySeMaFi): optional strategies for extensively deciphering gene splicing and expression in organisms without reference genome |
Q38613778 | Identification and analysis of alternative splicing events in Phaseolus vulgaris and Glycine max. |
Q55101840 | Identification and characterization of evolutionarily conserved alternative splicing events in a mangrove genus Sonneratia. |
Q44222449 | Identification and characterization of the soybean IPK1 ortholog of a low phytic acid mutant reveals an exon-excluding splice-site mutation. |
Q92600603 | Identification and genetic analysis of alternative splicing of long non-coding RNAs in tomato initial flowering stage |
Q48137753 | Identification of alternatively spliced transcripts of rice phytochelatin synthase 2 gene OsPCS2 involved in mitigation of cadmium and arsenic stresses. |
Q45017042 | Identification of an intronic splicing regulatory element involved in auto-regulation of alternative splicing of SCL33 pre-mRNA. |
Q47927421 | Identification of genes alternatively spliced in developing maize endosperm. |
Q50956719 | Identification of two additional members of the tRNA isopentenyltransferase family in Physcomitrella patens. |
Q37739566 | Identified of a novel cis-element regulating the alternative splicing of LcDREB2. |
Q50204802 | In silico analysis of the sequence features responsible for alternatively spliced introns in the model green alga Chlamydomonas reinhardtii. |
Q42073883 | Induction of vacuolar invertase inhibitor mRNA in potato tubers contributes to cold-induced sweetening resistance and includes spliced hybrid mRNA variants. |
Q51338242 | Insect herbivory elicits genome-wide alternative splicing responses in Nicotiana attenuata. |
Q34260336 | Interactions of SR45, an SR-like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing |
Q42259479 | Interplay between Alternative Splicing and Alternative Polyadenylation Defines the Expression Outcome of the Plant Unique OXIDATIVE TOLERANT-6 Gene |
Q38334032 | Intron retention and 3'-UTR analysis of Arabidopsis Dicer-like 2 transcripts |
Q44387495 | Intron retention regulates the expression of pectin methyl esterase inhibitor (Pmei) genes during wheat growth and development |
Q36061479 | Intron-mediated alternative splicing of Arabidopsis P5CS1 and its association with natural variation in proline and climate adaptation |
Q46950457 | Intron-mediated alternative splicing of WOOD-ASSOCIATED NAC TRANSCRIPTION FACTOR1B regulates cell wall thickening during fiber development in Populus species |
Q43199972 | Intronic T-DNA insertion in Arabidopsis NBR1 conditionally affects wild-type transcript level |
Q24651932 | Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana |
Q48218746 | Isoform Sequencing and State-of-Art Applications for Unravelling Complexity of Plant Transcriptomes |
Q39031312 | Light Regulation of Alternative Pre-mRNA Splicing in Plants. |
Q37951908 | Localization and dynamics of nuclear speckles in plants. |
Q36998783 | Mapping gene activity of Arabidopsis root hairs |
Q35636275 | Mechanism of cytoplasmic mRNA translation |
Q33665433 | Medicago truncatula contains a second gene encoding a plastid located glutamine synthetase exclusively expressed in developing seeds |
Q46854789 | Mining whole genomes and transcriptomes of Jatropha (Jatropha curcas) and Castor bean (Ricinus communis) for NBS-LRR genes and defense response associated transcription factors |
Q45230581 | Molecular and biochemical identification of inositol 1,3,4,5,6-pentakisphosphate 2-kinase encoding mRNA variants in castor bean (Ricinus communis L.) seeds |
Q30419164 | Multifunctionality and diversity of GDSL esterase/lipase gene family in rice (Oryza sativa L. japonica) genome: new insights from bioinformatics analysis |
Q42369960 | Multilevel Regulation of Abiotic Stress Responses in Plants |
Q35182763 | NFAT1 and NFAT3 cooperate with HDAC4 during regulation of alternative splicing of PMCA isoforms in PC12 cells |
Q43552395 | Negative feedback control of jasmonate signaling by an alternative splice variant of JAZ10. |
Q47723051 | Omega-3 fatty acid desaturase gene family from two ω-3 sources, Salvia hispanica and Perilla frutescens: Cloning, characterization and expression |
Q38041981 | On the physiological significance of alternative splicing events in higher plants |
Q34148932 | One hundred years of pleiotropy: a retrospective |
Q44122563 | Organ-specific alternatively spliced transcript isoforms of the sunflower SF21C gene |
Q60046640 | Overexpression of ScMYBAS1 alternative splicing transcripts differentially impacts biomass accumulation and drought tolerance in rice transgenic plants |
Q89582628 | Pentatricopeptide repeat protein MID1 modulates nad2 intron 1 splicing and Arabidopsis development |
Q38120455 | Photosynthetic gene expression in higher plants |
Q37902139 | Plant serine/arginine-rich proteins: roles in precursor messenger RNA splicing, plant development, and stress responses |
Q37194318 | Plant spliceosomal introns: not only cut and paste |
Q50773445 | Polypyrimidine tract binding protein homologs from Arabidopsis are key regulators of alternative splicing with implications in fundamental developmental processes. |
Q39035500 | Post-transcriptional and post-translational regulations of drought and heat response in plants: a spider's web of mechanisms |
Q37594600 | Post-transcriptional regulation of gene expression in plants during abiotic stress. |
Q39013218 | Posttranscriptional coordination of splicing and miRNA biogenesis in plants. |
Q26799301 | Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing Process |
Q35396798 | Prolyl 4-hydroxylase genes are subjected to alternative splicing in roots of maize seedlings under waterlogging |
Q37692001 | RBM25 Mediates Abiotic Responses in Plants |
Q34401522 | RNA G-Quadruplexes in the model plant species Arabidopsis thaliana: prevalence and possible functional roles |
Q38462589 | RNA sequencing provides insights into the toxicogenomic response of ZF4 cells to methyl methanesulfonate |
Q28730420 | RNA-Binding Proteins in Plant Immunity |
Q34550007 | RNA-Seq analysis reveals new gene models and alternative splicing in the fungal pathogen Fusarium graminearum |
Q47704101 | RNA-seq analysis reveals alternative splicing under salt stress in cotton, Gossypium davidsonii |
Q34266840 | Rare allele of HvLox-1 associated with lipoxygenase activity in barley (Hordeum vulgare L.). |
Q37014682 | Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis. |
Q42149155 | Regulation of plant developmental processes by a novel splicing factor |
Q38194103 | Regulation of the circadian clock through pre-mRNA splicing in Arabidopsis |
Q37728976 | Response of Gene Expression and Alternative Splicing to Distinct Growth Environments in Tomato |
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Q44620228 | Rice CYP734A cytochrome P450s inactivate brassinosteroids in Arabidopsis |
Q93067367 | Rice phytochelatin synthases OsPCS1 and OsPCS2 make different contributions to cadmium and arsenic tolerance |
Q53147955 | SKIP is a component of the spliceosome linking alternative splicing and the circadian clock in Arabidopsis. |
Q91643263 | SMRT sequencing analysis reveals the full-length transcripts and alternative splicing patterns in Ananas comosus var. bracteatus |
Q43121547 | Seed Dormancy in Arabidopsis Requires Self-Binding Ability of DOG1 Protein and the Presence of Multiple Isoforms Generated by Alternative Splicing |
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Q46243729 | Spliceosomal protein U1A is involved in alternative splicing and salt stress tolerance in Arabidopsis thaliana |
Q35113601 | Stress-induced endogenous siRNAs targeting regulatory intron sequences in Brachypodium. |
Q39197936 | Structure and expression of barley starch phosphorylase genes |
Q46552171 | Structure and expression of phosphoglucan phosphatase genes of Like Sex Four1 and Like Sex Four2 in barley. |
Q37472153 | Structure-function relationships in telomerase genes. |
Q33821535 | Support vector machines-based identification of alternative splicing in Arabidopsis thaliana from whole-genome tiling arrays |
Q47211736 | Systematic analysis of intron size and abundance parameters in diverse lineages |
Q41822867 | T-DNA insertion mutants reveal complex expression patterns of the aldehyde dehydrogenase 3H1 locus in Arabidopsis thaliana |
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Q39338857 | The Arabidopsis splicing factors, AtU2AF65, AtU2AF35, and AtSF1 shuttle between nuclei and cytoplasms |
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