| scholarly article | Q13442814 |
| P50 | author | Steven P Djordjevic | Q56845278 |
| P2093 | author name string | Piklu Roy Chowdhury | |
| Harold W Stokes | |||
| P2860 | cites work | Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology | Q21091008 |
| Pyrosequencing of antibiotic-contaminated river sediments reveals high levels of resistance and gene transfer elements | Q21135543 | ||
| Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4 | Q22272632 | ||
| Distribution of the blaTEM gene and blaTEM-containing transposons in commensal Escherichia coli. | Q45992210 | ||
| Identification of antimicrobial resistance and class 1 integrons in Shiga toxin-producing Escherichia coli recovered from humans and food animals | Q46505721 | ||
| Detection of sul1, sul2 and sul3 in sulphonamide resistant Escherichia coli isolates obtained from healthy humans, pork and pigs in Denmark | Q46745245 | ||
| Serotype, Shiga toxin (Stx) type, and antimicrobial resistance of Stx-producing Escherichia coli isolated from humans in Shizuoka Prefecture, Japan (2003-2007). | Q47716024 | ||
| The large plasmids of Shiga-toxin-producing Escherichia coli (STEC) are highly variable genetic elements | Q47954618 | ||
| Evolution of a multiple antibiotic resistance region in IncHI1 plasmids: reshaping resistance regions in situ. | Q48047150 | ||
| RSF1010-like plasmids in Australian Salmonella enterica serovar Typhimurium and origin of their sul2-strA-strB antibiotic resistance gene cluster. | Q48064086 | ||
| Association of IS26-composite transposons and complex In4-type integrons generates novel multidrug resistance loci in Salmonella genomic island 1. | Q48071922 | ||
| A pathway for the evolution of the plasmid NTP16 involving the novel kanamycin resistance transposon Tn4352. | Q48353118 | ||
| Proteus mirabilis clinical isolate harbouring a new variant of Salmonella genomic island 1 containing the multiple antibiotic resistance region | Q50075598 | ||
| Non-O157 Shiga toxin-producing Escherichia coli in retail ground beef and pork in the Washington D.C. area. | Q53361067 | ||
| Standard and real-time multiplex PCR methods for detection of trimethoprim resistance dfr genes in large collections of bacteria. | Q53531848 | ||
| Identification and characterization of class 1 integrons in bacteria from an aquatic environment. | Q54081324 | ||
| [Escherichia coli 0104:H4: a hybrid pathogen]. | Q54321954 | ||
| Gut microbiota disturbance during antibiotic therapy: a multi-omic approach | Q57155390 | ||
| Diversity of antimicrobial resistance genes and class-1-integrons in phylogenetically related porcine and human Escherichia coli | Q57260104 | ||
| Antibiotic resistance among verocytotoxigenic Escherichia coli (VTEC) and non-VTEC isolated from domestic animals and humans | Q78835229 | ||
| Gene cassettes encoding resistance to quaternary ammonium compounds: a role in the origin of clinical class 1 integrons? | Q79613597 | ||
| Cross-transmission of multidrug-resistant Acinetobacter baumannii clonal strains causing episodes of sepsis in a trauma intensive care unit | Q81103672 | ||
| Outbreak of multidrug-resistant Pseudomonas aeruginosa colonization and infection secondary to imperfect intensive care unit room design | Q82787228 | ||
| Hospital bath basins are frequently contaminated with multidrug-resistant human pathogens | Q83003693 | ||
| NDM-1 has arrived: first report of a carbapenem resistance mechanism in South Africa | Q83314991 | ||
| Class 1 integron-associated spread of resistance regions in Pseudomonas aeruginosa: plasmid or chromosomal platforms? | Q83762917 | ||
| Enterotypes of the human gut microbiome | Q24489818 | ||
| Characterization of a new metallo-beta-lactamase gene, bla(NDM-1), and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India | Q24647709 | ||
| Shiga toxin-producing Escherichia coli O104:H4: a new challenge for microbiology | Q27025422 | ||
| Antibiotic resistance is ancient | Q27672681 | ||
| A novel family of potentially mobile DNA elements encoding site-specific gene-integration functions: integrons | Q27976520 | ||
| Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany | Q28244221 | ||
| Functional characterization of the antibiotic resistance reservoir in the human microflora | Q28256703 | ||
| Food animals and antimicrobials: impacts on human health | Q28392729 | ||
| Sequence of closely related plasmids encoding bla(NDM-1) in two unrelated Klebsiella pneumoniae isolates in Singapore | Q28484879 | ||
| Pathogenic Escherichia coli | Q29616738 | ||
| Retrospective application of transposon-directed insertion site sequencing to a library of signature-tagged mini-Tn5Km2 mutants of Escherichia coli O157:H7 screened in cattle. | Q30473968 | ||
| Infections at the animal/human interface: shifting the paradigm from emergency response to prevention at source. | Q30581577 | ||
| Nucleotide sequence of the chromosomal region conferring multidrug resistance (R-type ASSuT) in Salmonella Typhimurium and monophasic Salmonella Typhimurium strains | Q31032049 | ||
| Characterization of variant Salmonella genomic island 1 multidrug resistance regions from serovars Typhimurium DT104 and Agona | Q31058677 | ||
| The evolution of class 1 integrons and the rise of antibiotic resistance | Q33335636 | ||
| Outbreak of haemolytic uraemic syndrome and bloody diarrhoea due to Escherichia coli O104:H4, south-west France, June 2011. | Q33396208 | ||
| Emergence and evolution of multiply antibiotic-resistant Salmonella enterica serovar Paratyphi B D-tartrate-utilizing strains containing SGI1. | Q33424243 | ||
| Evidence of increasing antibiotic resistance gene abundances in archived soils since 1940. | Q33520054 | ||
| Distribution of class 1 integrons with IS26-mediated deletions in their 3'-conserved segments in Escherichia coli of human and animal origin | Q33697686 | ||
| Conjugative DNA transfer induces the bacterial SOS response and promotes antibiotic resistance development through integron activation. | Q33727996 | ||
| The shared antibiotic resistome of soil bacteria and human pathogens | Q33804392 | ||
| The genomic island SGI1, containing the multiple antibiotic resistance region of Salmonella enterica serovar Typhimurium DT104 or variants of it, is widely distributed in other S. enterica serovars. | Q33855798 | ||
| Bovine feces from animals with gastrointestinal infections are a source of serologically diverse atypical enteropathogenic Escherichia coli and Shiga toxin-producing E. coli strains that commonly possess intimin. | Q33884586 | ||
| The emergence and spread of antibiotic resistance in food-borne bacteria | Q33930046 | ||
| Epidemic salmonella typhimurium DT 104--a truly international multiresistant clone | Q33959619 | ||
| The common ovine Shiga toxin 2-containing Escherichia coli serotypes and human isolates of the same serotypes possess a Stx2d toxin type | Q33972345 | ||
| Molecular characterization of integrons in Acinetobacter baumannii: description of a hybrid class 2 integron | Q33980718 | ||
| Complete nucleotide sequence of a 43-kilobase genomic island associated with the multidrug resistance region of Salmonella enterica serovar Typhimurium DT104 and its identification in phage type DT120 and serovar Agona | Q33996939 | ||
| Ventilator-associated pneumonia and its prevention | Q34284836 | ||
| Regional dissemination of a trimethoprim-resistance gene cassette via a successful transposable element. | Q34292830 | ||
| Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2 | Q34469643 | ||
| Enterohemorrhagic Escherichia coli specific enterohemolysin induced IL-1β in human macrophages and EHEC-induced IL-1β required activation of NLRP3 inflammasome | Q34500087 | ||
| Susceptibility of Danish Escherichia coli strains isolated from urinary tract infections and bacteraemia, and distribution of sul genes conferring sulphonamide resistance | Q34527830 | ||
| stx1c Is the most common Shiga toxin 1 subtype among Shiga toxin-producing Escherichia coli isolates from sheep but not among isolates from cattle | Q34773566 | ||
| PCR typing of genetic determinants for metallo-beta-lactamases and integrases carried by gram-negative bacteria isolated in Japan, with focus on the class 3 integron | Q34954694 | ||
| Class 1 integrons potentially predating the association with tn402-like transposition genes are present in a sediment microbial community | Q34976781 | ||
| Bovine non-O157 Shiga toxin 2-containing Escherichia coli isolates commonly possess stx2-EDL933 and/or stx2vhb subtypes | Q35026634 | ||
| Dissemination of multiple drug resistance genes by class 1 integrons in Klebsiella pneumoniae isolates from four countries: a comparative study | Q35065717 | ||
| Identification and molecular characterization of antimicrobial-resistant shiga toxin-producing Escherichia coli isolated from retail meat products | Q35070347 | ||
| Genetic context and structural diversity of class 1 integrons from human commensal bacteria in a hospital intensive care unit | Q35139550 | ||
| Rapid detection and identification of metallo-beta-lactamase-encoding genes by multiplex real-time PCR assay and melt curve analysis | Q35690460 | ||
| Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011. | Q35779118 | ||
| pJIE137 carrying blaCTX-M-62 is closely related to p271A carrying blaNDM-1. | Q35867317 | ||
| Complete sequence of a novel 178-kilobase plasmid carrying bla(NDM-1) in a Providencia stuartii strain isolated in Afghanistan. | Q35867403 | ||
| New sequence types and multidrug resistance among pathogenic Escherichia coli isolates from coastal marine sediments | Q35940892 | ||
| Antimicrobial resistance of Escherichia coli O26, O103, O111, O128, and O145 from animals and humans | Q36014947 | ||
| The genetics of Salmonella genomic island 1. | Q36483734 | ||
| Environmental contamination makes an important contribution to hospital infection | Q36836224 | ||
| Advances in nucleic acid-based diagnostics of bacterial infections | Q36906274 | ||
| Distribution of Intimin Subtypes amongEscherichia coliIsolates from Ruminant and Human Sources | Q37058041 | ||
| Outbreaks of nosocomial infections: lessons learned and perspectives | Q37204814 | ||
| Gene cassettes and cassette arrays in mobile resistance integrons. | Q37470852 | ||
| Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype | Q37471898 | ||
| Hospital cleaning in the 21st century | Q37866165 | ||
| Antibiotic resistance gene spread due to manure application on agricultural fields | Q37872483 | ||
| The role played by contaminated surfaces in the transmission of nosocomial pathogens. | Q37888374 | ||
| Are humans increasing bacterial evolvability? | Q37998201 | ||
| High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity. | Q38032123 | ||
| Antimicrobials as promoters of genetic variation | Q38034384 | ||
| Pathogenic Escherichia coli and One Health implications. | Q38037385 | ||
| Integrons and gene cassettes: hotspots of diversity in bacterial genomes | Q38041234 | ||
| Context matters - the complex interplay between resistome genotypes and resistance phenotypes | Q38041318 | ||
| Analysis of the resistome of a multidrug-resistant NDM-1-producing Escherichia coli strain by high-throughput genome sequencing | Q38282766 | ||
| Molecular epidemiology of antibiotic resistance genes in multiresistant epidemic Salmonella typhimurium DT 104. | Q38551267 | ||
| Characterisation of integrons and antibiotic resistance genes in Danish multiresistant Salmonella enterica Typhimurium DT104. | Q38553209 | ||
| Prevalence and genotypic analysis of plasmid-mediated β-lactamases among urinary Klebsiella pneumoniae isolates in Moroccan community | Q38893320 | ||
| Virulence properties and serotypes of Shiga toxin-producing Escherichia coli from healthy Australian slaughter-age sheep | Q39464806 | ||
| Detection of shiga-like toxin (stx1 and stx2), intimin (eaeA), and enterohemorrhagic Escherichia coli (EHEC) hemolysin (EHEC hlyA) genes in animal feces by multiplex PCR. | Q39480634 | ||
| Virulence properties and serotypes of Shiga toxin-producing Escherichia coli from healthy Australian cattle | Q39676528 | ||
| Outbreak of Pseudomonas aeruginosa surgical site infections after arthroscopic procedures: Texas, 2009. | Q39687409 | ||
| PCR mapping of integrons reveals several novel combinations of resistance genes | Q39778947 | ||
| Sampling the antibiotic resistome | Q40357052 | ||
| Multidrug-resistant Salmonella enterica serovar paratyphi A harbors IncHI1 plasmids similar to those found in serovar typhi. | Q40454488 | ||
| Aquariums as reservoirs for multidrug-resistant Salmonella Paratyphi B. | Q40478940 | ||
| Serotypes and virulence gene profiles of shiga toxin-producing Escherichia coli strains isolated from feces of pasture-fed and lot-fed sheep | Q41031448 | ||
| The 120 592 bp IncF plasmid pRSB107 isolated from a sewage-treatment plant encodes nine different antibiotic-resistance determinants, two iron-acquisition systems and other putative virulence-associated functions | Q41458813 | ||
| A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407. | Q42033890 | ||
| blaNDM-1 is a chimera likely constructed in Acinetobacter baumannii | Q42110674 | ||
| Genetic contexts of blaNDM-1. | Q42383131 | ||
| Plasmid content of a clinically relevant Klebsiella pneumoniae clone from the Czech Republic producing CTX-M-15 and QnrB1. | Q42592728 | ||
| Epidemiology and molecular characterisation of metallo-β-lactamase-producing Enterobacteriaceae in a university hospital Intensive Care Unit in Greece | Q42614288 | ||
| Transposons related to Tn1696 in IncHI2 plasmids in multiply antibiotic resistant Salmonella enterica serovar Typhimurium from Australian animals | Q42671642 | ||
| Characterization of antimicrobial resistance and class 1 and 2 integrons in Salmonella enterica isolates from different sources in Portugal | Q42688807 | ||
| Identification of enterohemorrhagic Escherichia coli O26:H- genes required for intestinal colonization in calves | Q42704861 | ||
| Evolution of transposons containing blaTEM genes | Q42845924 | ||
| Occurrence and Distribution of Various Genetic Structures of Class 1 and Class 2 Integrons inSalmonella entericaIsolates from Foodborne Disease Patients in Korea for 16 Years | Q43168531 | ||
| Multiple antibiotic resistance gene recruitment onto the enterohemorrhagic Escherichia coli virulence plasmid | Q43241054 | ||
| Outbreak investigation of nosocomial enterobacter cloacae bacteraemia in a neonatal intensive care unit | Q43340432 | ||
| Plasmids and bacterial strains mediating multidrug-resistant hospital-acquired infections are coresidents of the hospital environment | Q44013849 | ||
| Antimicrobial resistance and resistance genes in Escherichia coli isolated from retail meat purchased in Alberta, Canada | Q44278463 | ||
| Phenotypic and genotypic characterization of antimicrobial resistance in German Escherichia coli isolates from cattle, swine and poultry | Q44530930 | ||
| Evidence of extensive interspecies transfer of integron-mediated antimicrobial resistance genes among multidrug-resistant Enterobacteriaceae in a clinical setting | Q45010857 | ||
| First report of New Delhi metallo-beta-lactamase-1-producing Klebsiella pneumoniae in Iran | Q45215633 | ||
| Extended-spectrum β-lactamase-producing Escherichia coli from retail chicken meat and humans: comparison of strains, plasmids, resistance genes, and virulence factors. | Q45697171 | ||
| P921 | main subject | zoonosis | Q182672 |
| soil microbiota | Q123989545 | ||
| P304 | page(s) | 86 | |
| P577 | publication date | 2013-04-30 | |
| P1433 | published in | Frontiers in Microbiology | Q27723481 |
| P1476 | title | Mobile elements, zoonotic pathogens and commensal bacteria: conduits for the delivery of resistance genes into humans, production animals and soil microbiota | |
| P478 | volume | 4 |
| Q35559889 | A role for Tn6029 in the evolution of the complex antibiotic resistance gene loci in genomic island 3 in enteroaggregative hemorrhagic Escherichia coli O104:H4. |
| Q38263035 | Antibacterial resistance: an emerging 'zoonosis'? |
| Q40069987 | Antibiotic resistance genes in an urban river as impacted by bacterial community and physicochemical parameters. |
| Q34885134 | Antibiotic resistance genes in food and gut (non-pathogenic) bacteria. Bad genes in good bugs. |
| Q91745031 | Antibiotic resistance genes in treated wastewater and in the receiving water bodies: A pan-European survey of urban settings |
| Q57285294 | Australian porcine clonal complex 10 (CC10) Escherichia coli belong to multiple sublineages of a highly diverse global CC10 phylogeny |
| Q54955873 | Clay-induced DNA breaks as a path for genetic diversity, antibiotic resistance, and asbestos carcinogenesis. |
| Q55361864 | Cloning and Expression of the Organophosphate Pesticide-Degrading α-β Hydrolase Gene in Plasmid pMK-07 to Confer Cross-Resistance to Antibiotics. |
| Q35608077 | Comparative genomic analysis of a multiple antimicrobial resistant enterotoxigenic E. coli O157 lineage from Australian pigs. |
| Q51148661 | Detection and Characterization of Streptomycin Resistance (strA-strB) in a Honeybee Gut Symbiont (Snodgrassella alvi) and the Associated Risk of Antibiotic Resistance Transfer. |
| Q26744587 | Genomic Microbial Epidemiology Is Needed to Comprehend the Global Problem of Antibiotic Resistance and to Improve Pathogen Diagnosis |
| Q34031581 | Genomic interplay in bacterial communities: implications for growth promoting practices in animal husbandry. |
| Q33743517 | Integrons: past, present, and future. |
| Q42366911 | Multiple Antibiotic-Resistant, Extended Spectrum-β-Lactamase (ESBL)-Producing Enterobacteria in Fresh Seafood |
| Q41322663 | N-terminomics identifies widespread endoproteolysis and novel methionine excision in a genome-reduced bacterial pathogen. |
| Q49964207 | PlasFlow: predicting plasmid sequences in metagenomic data using genome signatures |
| Q35781041 | Plasmid Detection, Characterization, and Ecology |
| Q48509112 | Porcine commensal Escherichia coli: a reservoir for class 1 integrons associated with IS26. |
| Q35236703 | Public health evolutionary biology of antimicrobial resistance: priorities for intervention |
| Q35545608 | Resistance gene pool to co-trimoxazole in non-susceptible Nocardia strains |
| Q35041070 | Sequences of two related multiple antibiotic resistance virulence plasmids sharing a unique IS26-related molecular signature isolated from different Escherichia coli pathotypes from different hosts |
| Q90009942 | Surveillance of Enterococcus spp. reveals distinct species and antimicrobial resistance diversity across a One-Health continuum |
| Q35305715 | The soil resistome: a critical review on antibiotic resistance origins, ecology and dissemination potential in telluric bacteria. |
| Q35816134 | Understanding the contribution of environmental factors in the spread of antimicrobial resistance |
| Q35626365 | Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution |
| Q89736261 | Whole Genome Sequencing of Escherichia coli From Store-Bought Produce |
| Q64268001 | Whole genome sequence analysis of Australian avian pathogenic Escherichia coli that carry the class 1 integrase gene |
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