Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants

scientific article published on 30 April 2013

Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3389/FPLS.2013.00120
P932PMC publication ID3639386
P698PubMed publication ID23641251
P5875ResearchGate publication ID236615258

P50authorAngela SessitschQ41847397
Barbara Reinhold-HurekQ47007237
Lena Hauberg-LotteQ47007243
P2093author name stringJerzy Nowak
Patrick S G Chain
Maria W Shin
Birgit Mitter
Lena Hauberg-Lotte
Alexandra Petric
P2860cites workComplete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in miceQ21092477
Protein secretion systems in bacterial-host associations, and their description in the Gene OntologyQ21263038
SdiA of Salmonella enterica is a LuxR homolog that detects mixed microbial communitiesQ24548877
Structure, function, and evolution of bacterial ATP-binding cassette systemsQ24643436
Genome survey and characterization of endophytic bacteria exhibiting a beneficial effect on growth and development of poplar treesQ24644365
The CGView Server: a comparative genomics tool for circular genomesQ24646287
Bacterial small-molecule signaling pathwaysQ24657011
Siderophore-based iron acquisition and pathogen controlQ24681774
A census of membrane-bound and intracellular signal transduction proteins in bacteria: bacterial IQ, extroverts and introvertsQ24810727
Dynamics, diversity and function of endophytic siderophore-producing bacteria in rice.Q51613299
Growth Enhancement and Developmental Modifications of in Vitro Grown Potato (Solanum tuberosum spp. tuberosum) as Affected by a Nonfluorescent Pseudomonas sp.Q52236249
Proposal of biostimulation for hexachlorocyclohexane (HCH)-decontamination and characterization of culturable bacterial community from high-dose point HCH-contaminated soils.Q52696227
The type III secretion system needle tip complex mediates host cell sensing and translocon insertion.Q53575352
Inhibitory effects of plant polyphenols on rat liver glutathione S-transferases.Q54028669
An endoglucanase is involved in infection of rice roots by the not-cellulose-metabolizing endophyte Azoarcus sp. strain BH72.Q54614302
Endophytic colonization of Vitis vinifera L. by Burkholderia phytofirmans strain PsJN: from the rhizosphere to inflorescence tissuesQ57054922
AHL-driven quorum-sensing circuits: their frequency and function among the ProteobacteriaQ58056352
Evidence that Ralstonia eutropha (Alcaligenes eutrophus) contains a functional homologue of the Ralstonia solanacearum Phc cell density sensing systemQ73167634
Type IV pili are involved in plant-microbe and fungus-microbe interactionsQ77456423
Twitching motility is essential for endophytic rice colonization by the N2-fixing endophyte Azoarcus sp. strain BH72Q80344186
Polyamines and plant stress: activation of putrescine biosynthesis by osmotic shockQ81202459
Flagella mediate endophytic competence rather than act as MAMPS in rice-Azoarcus sp. strain BH72 interactionsQ83209857
A survey of TonB-dependent receptors in fluorescent pseudomonadsQ86949902
Bacterial chemotactic motility is important for the initiation of wheat root colonization by Azospirillum brasilenseQ28286172
Growth promotion and colonization of switchgrass (Panicum virgatum) cv. Alamo by bacterial endophyte Burkholderia phytofirmans strain PsJNQ28727369
Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5Q28750439
Type IV pili and twitching motilityQ29615262
Interplay of heritage and habitat in the distribution of bacterial signal transduction systemsQ30499357
Burkholderia phytofirmans sp. nov., a novel plant-associated bacterium with plant-beneficial propertiesQ30989162
Innate immunity in Arabidopsis thaliana: lipopolysaccharides activate nitric oxide synthase (NOS) and induce defense genes.Q31122651
Effect of agricultural management regime on Burkholderia community structure in soilQ33253374
Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp. strain BH72.Q33261161
Bacterial endophytes: recent developments and applicationsQ33306981
Diversity and occurrence of Burkholderia spp. in the natural environment.Q33329214
Root colonization and systemic spreading of Azoarcus sp. strain BH72 in grassesQ33367283
DNA-based stable isotope probing enables the identification of active bacterial endophytes in potatoesQ33399602
A filamentous hemagglutinin-like protein of Xanthomonas axonopodis pv. citri, the phytopathogen responsible for citrus canker, is involved in bacterial virulenceQ33405743
Common and contrasting themes in host cell-targeted effectors from bacterial, fungal, oomycete and nematode plant symbionts described using the Gene OntologyQ33417108
Genome sequence of the plant growth promoting endophytic bacterium Enterobacter sp. 638Q33582213
Evolutionary microbial genomics: insights into bacterial host adaptationQ33592109
Climate change effects on beneficial plant-microorganism interactionsQ33596544
Genome of Herbaspirillum seropedicae strain SmR1, a specialized diazotrophic endophyte of tropical grassesQ33904037
Polyamines: mysterious modulators of cellular functionsQ33920552
Nitrogen fixation in wheat provided by Klebsiella pneumoniae 342.Q33982495
Bacterial type IV secretion: conjugation systems adapted to deliver effector molecules to host cellsQ33987714
Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysisQ34028832
The family-3 glycoside hydrolases: from housekeeping functions to host-microbe interactionsQ34052579
Environmental factors affecting the expression of pilAB as well as the proteome and transcriptome of the grass endophyte Azoarcus sp. strain BH72.Q34140592
Quorum sensing in plant-pathogenic bacteriaQ34194746
Genetic and transcriptional analysis of the siderophore malleobactin biosynthesis and transport genes in the human pathogen Burkholderia pseudomallei K96243.Q34353807
Bacterial glutathione S-transferases: what are they good for?Q34417495
The elusive roles of bacterial glutathione S-transferases: new lessons from genomes.Q34551019
The QscR quorum-sensing regulon of Pseudomonas aeruginosa: an orphan claims its identityQ34564984
Biofilm formation by plant-associated bacteriaQ34628867
The extracytoplasmic function (ECF) sigma factorsQ34695160
Quorum sensing in plant-associated bacteriaQ34785513
Properties of bacterial endophytes and their proposed role in plant growthQ34826657
GC-Profile: a web-based tool for visualizing and analyzing the variation of GC content in genomic sequencesQ34974317
Bacterial subfamily of LuxR regulators that respond to plant compoundsQ35080970
Complete genome sequence of the plant growth-promoting endophyte Burkholderia phytofirmans strain PsJN.Q35096389
Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatilityQ35108186
The effect of the chemical, biological, and physical environment on quorum sensing in structured microbial communitiesQ35633798
Plant responses to bacterial quorum sensing signalsQ35825033
Promoters in the environment: transcriptional regulation in its natural contextQ36026783
Bacterial type two secretion system secreted proteins: double-edged swords for plant pathogensQ36259452
Regulation of motility by the ExpR/Sin quorum-sensing system in Sinorhizobium melilotiQ36421821
Curli biogenesis and functionQ36480477
Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501.Q36677127
Identification of 3-hydroxypalmitic acid methyl ester as a novel autoregulator controlling virulence in Ralstonia solanacearumQ36893178
Functional role of bacterial multidrug efflux pumps in microbial natural ecosystemsQ37389801
LuxR-family 'solos': bachelor sensors/regulators of signalling moleculesQ37454006
Beneficial bacteria of agricultural importanceQ37773171
Living inside plants: bacterial endophytesQ37871183
Quorum sensing of bacteria and trans-kingdom interactions of N-acyl homoserine lactones with eukaryotes.Q38014750
Light microscopy observations of tetrazolium-reducing bacteria in the endorhizosphere of maize and other grasses in BrazilQ39342965
N-acyl-homoserine lactone inhibition of rhizobial growth is mediated by two quorum-sensing genes that regulate plasmid transferQ39679992
Involvement of a plasmid-encoded type IV secretion system in the plant tissue watersoaking phenotype of Burkholderia cenocepaciaQ39964412
Extracytoplasmic function sigma factors in Pseudomonas syringaeQ40376671
Osmoadaptation by rhizosphere bacteriaQ41199531
Endophytic colonization of Vitis vinifera L. by plant growth-promoting bacterium Burkholderia sp. strain PsJN.Q41959940
Differential Expression of Virulence Genes and Motility in Ralstonia (Pseudomonas) solanacearum during Exponential GrowthQ42008764
Moraxella catarrhalis strain O35E expresses two filamentous hemagglutinin-like proteins that mediate adherence to human epithelial cellsQ42029171
Complete genomic structure of the cultivated rice endophyte Azospirillum sp. B510.Q42921137
Biphenyl degradation kinetics by Burkholderia xenovorans LB400 in two-phase partitioning bioreactors.Q43329422
Increased uptake of putrescine in the rhizosphere inhibits competitive root colonization by Pseudomonas fluorescens strain WCS365.Q43733309
THE OXIDATIVE BURST IN PLANT DISEASE RESISTANCE.Q44073104
Quorum sensing and indole-3-acetic acid degradation play a role in colonization and plant growth promotion of Arabidopsis thaliana by Burkholderia phytofirmans PsJN.Q44299723
The PhyR-sigma(EcfG) signalling cascade is involved in stress response and symbiotic efficiency in Bradyrhizobium japonicum.Q45953116
P921main subjectendophyteQ260335
Burkholderia phytofirmansQ4999026
P304page(s)120
P577publication date2013-04-30
P1433published inFrontiers in Plant ScienceQ27723840
P1476titleComparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants
P478volume4

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cites work (P2860)
Q40067399A Complex Molecular Interplay of Auxin and Ethylene Signaling Pathways Is Involved in Arabidopsis Growth Promotion by Burkholderia phytofirmans PsJN.
Q38761738A Culture-Independent Approach to Enrich Endophytic Bacterial Cells from Sugarcane Stems for Community Characterization.
Q91963873A Machine Learning-Based Raman Spectroscopic Assay for the Identification of Burkholderia mallei and Related Species
Q30841651An In vitro Study of Bio-Control and Plant Growth Promotion Potential of Salicaceae Endophytes
Q92563704An Osmoregulatory Mechanism Operating through OmpR and LrhA Controls the Motile-Sessile Switch in the Plant Growth-Promoting Bacterium Pantoea alhagi
Q35360727Azoarcus sp. CIB, an anaerobic biodegrader of aromatic compounds shows an endophytic lifestyle
Q89434220Bacterial Endophyte Colonization and Distribution within Plants
Q35809981Beneficial Bacteria Isolated from Grapevine Inner Tissues Shape Arabidopsis thaliana Roots
Q39257889Biochemical and Genetic Bases of Indole-3-Acetic Acid (Auxin Phytohormone) Degradation by the Plant-Growth-Promoting Rhizobacterium Paraburkholderia phytofirmans PsJN.
Q57455995Biocontrol traits of Bacillus licheniformis GL174, a culturable endophyte of Vitis vinifera cv. Glera
Q61443121Biodegradation of naphthalene, BTEX, and aliphatic hydrocarbons by Paraburkholderia aromaticivorans BN5 isolated from petroleum-contaminated soil
Q92563791Biofilm-Constructing Variants of Paraburkholderia phytofirmans PsJN Outcompete the Wild-Type Form in Free-Living and Static Conditions but Not In Planta
Q36516229Burkholderia phytofirmans Inoculation-Induced Changes on the Shoot Cell Anatomy and Iron Accumulation Reveal Novel Components of Arabidopsis-Endophyte Interaction that Can Benefit Downstream Biomass Deconstruction
Q42411796Burkholderia phytofirmans PsJN induces long-term metabolic and transcriptional changes involved in Arabidopsis thaliana salt tolerance
Q47794467Chemical signaling involved in plant-microbe interactions
Q99238486Comparative Genomics of Microbacterium Species to Reveal Diversity, Potential for Secondary Metabolites and Heavy Metal Resistance
Q37735756Computational Identification and Comparative Analysis of Secreted and Transmembrane Proteins in Six Burkholderia Species
Q90710575Deciphering the root endosphere microbiome of the desert plant Alhagi sparsifolia for drought resistance-promoting bacteria
Q64253886Defining the Genetic Basis of Plant⁻Endophytic Bacteria Interactions
Q57177292Differentially Expressed Genes in Response to Iron Availability
Q58795500Diversity and Applications of Endophytic Actinobacteria of Plants in Special and Other Ecological Niches
Q46238076Efficiency of biogas slurry and Burkholderia phytofirmans PsJN to improve growth, physiology, and antioxidant activity of Brassica napus L. in chromium-contaminated soil
Q28080039Endophytes: A Treasure House of Bioactive Compounds of Medicinal Importance
Q35486124Endophytic colonization and biocontrol performance of Pseudomonas fluorescens PICF7 in olive (Olea europaea L.) are determined neither by pyoverdine production nor swimming motility.
Q50019922Engineering abiotic stress response in plants for biomass production.
Q36122271Essential Genes for In Vitro Growth of the Endophyte Herbaspirillum seropedicae SmR1 as Revealed by Transposon Insertion Site Sequencing
Q36086746Evidence for an Opportunistic and Endophytic Lifestyle of the Bursaphelenchus xylophilus-Associated Bacteria Serratia marcescens PWN146 Isolated from Wilting Pinus pinaster
Q49505898Genome-Wide Analysis of Type VI System Clusters and Effectors in Burkholderia Species.
Q64448647Genomic characterization of Nitrospirillum amazonense strain CBAmC, a nitrogen-fixing bacterium isolated from surface-sterilized sugarcane stems
Q38414676Global gene expression profiling of two switchgrass cultivars following inoculation with Burkholderia phytofirmans strain PsJN.
Q64245786Green Technology: Bacteria-Based Approach Could Lead to Unsuspected Microbe⁻Plant⁻Animal Interactions
Q48206920Hybrid genome assembly and annotation of Paenibacillus pasadenensis strain R16 reveals insights on endophytic life style and antifungal activity
Q57003427Initial Steps towards Biocontrol in Hops: Successful Colonization and Plant Growth Promotion by Four Bacterial Biocontrol Agents
Q47194206Inner Plant Values: Diversity, Colonization and Benefits from Endophytic Bacteria.
Q92380973Inside out: microbiota dynamics during host-plant adaptation of whiteflies
Q47408069Introduction of a putative biocontrol agent into a range of phytoplasma- and liberibacter-susceptible crop plants
Q42654425Involvement of NpdA, a Putative 2-Nitropropane Dioxygenase, in the T3SS Expression and Full Virulence in Ralstonia solanacearum OE1-1.
Q91923480Is the bacterial leaf nodule symbiosis obligate for Psychotria umbellata? The development of a Burkholderia-free host plant
Q57054753L-Tryptophan-dependent biosynthesis of indole-3-acetic acid (IAA) improves plant growth and colonization of maize by Burkholderia phytofirmans PsJN
Q91782364Not Just a Pathogen? Description of a Plant-Beneficial Pseudomonas syringae Strain
Q36092961Phytoremediation: State-of-the-art and a key role for the plant microbiome in future trends and research prospects
Q46633743Plant species affect colonization patterns and metabolic activity of associated endophytes during phytoremediation of crude oil-contaminated soil.
Q30731722Plant-associated symbiotic Burkholderia species lack hallmark strategies required in mammalian pathogenesis
Q38370201Plant-endophyte symbiosis, an ecological perspective.
Q42772742RNA-seq transcriptional profiling of Herbaspirillum seropedicae colonizing wheat (Triticum aestivum) roots.
Q46570099Rice bacterial endophytes: isolation of a collection, identification of beneficial strains and microbiome analysis
Q93047524Salt-Tolerant Halophyte Rhizosphere Bacteria Stimulate Growth of Alfalfa in Salty Soil
Q47889733Serobactins-mediated iron acquisition systems optimize competitive fitness of Herbaspirillum seropedicae inside rice plants.
Q27008650The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes
Q94561415The Potato Yam Phyllosphere Ectosymbiont Paraburkholderia sp. Msb3 Is a Potent Growth Promotor in Tomato
Q36365318The Type III Secretion System (T3SS) is a Determinant for Rice-Endophyte Colonization by Non-Photosynthetic Bradyrhizobium
Q35997637The genome and genetics of a high oxidative stress tolerant Serratia sp. LCN16 isolated from the plant parasitic nematode Bursaphelenchus xylophilus
Q34007236The genome of the fungal-interactive soil bacterium Burkholderia terrae BS001-a plethora of outstanding interactive capabilities unveiled
Q45783635The grapevine flagellin receptor VvFLS2 differentially recognizes flagellin-derived epitopes from the endophytic growth-promoting bacterium Burkholderia phytofirmans and plant pathogenic bacteria.
Q35585893The intracellular Scots pine shoot symbiont Methylobacterium extorquens DSM13060 aggregates around the host nucleus and encodes eukaryote-like proteins
Q101564265The mode of action of plant associated Burkholderia against grey mould disease in grapevine revealed through traits and genomic analyses
Q46453896The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T is genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72.
Q38538360The olive knot disease as a model to study the role of interspecies bacterial communities in plant disease
Q92688402The role of microbial motility and chemotaxis in symbiosis
Q26751056Towards an Enhanced Understanding of Plant-Microbiome Interactions to Improve Phytoremediation: Engineering the Metaorganism
Q36143568Transcriptome Profiling of the Endophyte Burkholderia phytofirmans PsJN Indicates Sensing of the Plant Environment and Drought Stress
Q48148936Transcriptomic profiling of Burkholderia phymatum STM815, Cupriavidus taiwanensis LMG19424 and Rhizobium mesoamericanum STM3625 in response to Mimosa pudica root exudates illuminates the molecular basis of their nodulation competitiveness and symbio
Q36837543Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System
Q27027358Understanding and engineering beneficial plant-microbe interactions: plant growth promotion in energy crops
Q33709752Unraveling the plant microbiome: looking back and future perspectives
Q36022714Variable Nitrogen Fixation in Wild Populus
Q35082271Vertical transmission explains the specific Burkholderia pattern in Sphagnum mosses at multi-geographic scale
Q39165822Volatile-Mediated Effects Predominate in Paraburkholderia phytofirmans Growth Promotion and Salt Stress Tolerance of Arabidopsis thaliana.
Q35644339Whole-genome comparative analysis of virulence genes unveils similarities and differences between endophytes and other symbiotic bacteria

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