| scholarly article | Q13442814 |
| P50 | author | Peter V Kharchenko | Q87103783 |
| P2093 | author name string | Peter J Park | |
| Michael Y Tolstorukov | |||
| Caroline J Woo | |||
| Robert E Kingston | |||
| P2860 | cites work | A theoretical model for the prediction of sequence-dependent nucleosome thermodynamic stability | Q40167701 |
| Sequence-dependent deformational anisotropy of chromatin DNA. | Q40482165 | ||
| High sequence specificity of micrococcal nuclease | Q40496599 | ||
| Sequence periodicities in chicken nucleosome core DNA. | Q43530323 | ||
| Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays. | Q50725987 | ||
| High-throughput mapping of the chromatin structure of human promoters. | Q51582234 | ||
| Translational positioning of nucleosomes on DNA: the role of sequence-dependent isotropic DNA bending stiffness. | Q52344458 | ||
| Nucleosome spacing is compressed in active chromatin domains of chick erythroid cells | Q52477378 | ||
| Evidence for nucleosome depletion at active regulatory regions genome-wide | Q54998820 | ||
| The conformation dependent hydrolysis of DNA by micrococcal nuclease | Q68575657 | ||
| Nucleosome positions predicted through comparative genomics | Q80238247 | ||
| Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning | Q21146082 | ||
| Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription | Q24563638 | ||
| A genomic code for nucleosome positioning | Q24650238 | ||
| Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution | Q27639217 | ||
| The structure of an oligo(dA).oligo(dT) tract and its biological implications | Q27728751 | ||
| The role of chromatin during transcription | Q27860995 | ||
| A role for chromatin remodeling in transcriptional termination by RNA polymerase II. | Q27938776 | ||
| Nuclear organization of the genome and the potential for gene regulation | Q28303751 | ||
| Dynamic regulation of nucleosome positioning in the human genome | Q29615046 | ||
| DNA sequence-dependent deformability deduced from protein-DNA crystal complexes | Q29616629 | ||
| Alteration of nucleosome structure as a mechanism of transcriptional regulation | Q29620047 | ||
| Different nucleosome spacing in transcribed and non-transcribed regions of the ribosomal RNA gene in Tetrahymena thermophila | Q30463564 | ||
| A close association between sites of DNase I hypersensitivity and sites of enhanced cleavage by micrococcal nuclease in the 5′-flanking region of the actively transcribed ovalbumin gene | Q33939524 | ||
| Chromatin transitions during activation and repression of galactose-regulated genes in yeast. | Q34069432 | ||
| The pitch of chromatin DNA is reflected in its nucleotide sequence | Q34273471 | ||
| Genome-scale identification of nucleosome positions in S. cerevisiae | Q34427114 | ||
| Role of DNA sequence in nucleosome stability and dynamics | Q34524417 | ||
| A high-resolution atlas of nucleosome occupancy in yeast | Q34688532 | ||
| Flexibility and constraint in the nucleosome core landscape of Caenorhabditis elegans chromatin | Q35173699 | ||
| Nucleosome positioning signals in genomic DNA | Q35914766 | ||
| A novel roll-and-slide mechanism of DNA folding in chromatin: implications for nucleosome positioning | Q36025444 | ||
| Nucleosome displacement in transcription | Q36554288 | ||
| DNA physical properties determine nucleosome occupancy from yeast to fly. | Q36740102 | ||
| Transcription factor access to promoter elements. | Q36898864 | ||
| Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast | Q37539289 | ||
| Comparative subunit structure of HeLa, yeast, and chicken erythrocyte chromatin | Q37598074 | ||
| Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites | Q39459477 | ||
| DNA helix: the importance of being GC-rich | Q39744481 | ||
| P433 | issue | 10 | |
| P304 | page(s) | 1554-1561 | |
| P577 | publication date | 2008-08-22 | |
| P1433 | published in | Genome Research | Q5533485 |
| P1476 | title | Nucleosome positioning in human HOX gene clusters | |
| P478 | volume | 18 |
| Q42067778 | A region of the human HOXD cluster that confers polycomb-group responsiveness |
| Q37948799 | Analysis of primary structure of chromatin with next-generation sequencing |
| Q35905422 | BAF250a Protein Regulates Nucleosome Occupancy and Histone Modifications in Priming Embryonic Stem Cell Differentiation |
| Q33807777 | ChIPseqR: analysis of ChIP-seq experiments |
| Q58005695 | Chromatin Remodeling and Nucleosome Positioning |
| Q37222781 | Comparative analysis of H2A.Z nucleosome organization in the human and yeast genomes |
| Q64250509 | Coupling of PARP1-mediated chromatin structural changes to transcriptional RNA polymerase II elongation and cotranscriptional splicing |
| Q34721066 | Dynamic nucleosome organization at hox promoters during zebrafish embryogenesis. |
| Q35007128 | Genome-wide characterization of chromatin binding and nucleosome spacing activity of the nucleosome remodelling ATPase ISWI. |
| Q35281209 | Impact of chromatin structure on sequence variability in the human genome |
| Q33349451 | Learning a weighted sequence model of the nucleosome core and linker yields more accurate predictions in Saccharomyces cerevisiae and Homo sapiens |
| Q33531810 | Lsh mediated RNA polymerase II stalling at HoxC6 and HoxC8 involves DNA methylation |
| Q34442765 | Nucleosomal occupancy changes locally over key regulatory regions during cell differentiation and reprogramming |
| Q33962076 | Nucleosome occupancy landscape and dynamics at mouse recombination hotspots |
| Q46849980 | Nucleosome positioning as a determinant of exon recognition |
| Q24653816 | Predicting nucleosome positions on the DNA: combining intrinsic sequence preferences and remodeler activities |
| Q52598341 | Promoter-Targeted Small Activating RNAs Alter Nucleosome Positioning. |
| Q28509126 | Reduction of Hox gene expression by histone H1 depletion |
| Q53143246 | Small-Activating RNA Can Change Nucleosome Positioning in Human Fibroblasts. |
| Q36950326 | Swi/Snf chromatin remodeling/tumor suppressor complex establishes nucleosome occupancy at target promoters |
| Q64992907 | The chromatin remodeling protein Lsh alters nucleosome occupancy at putative enhancers and modulates binding of lineage specific transcription factors. |
| Q33785748 | The effect of micrococcal nuclease digestion on nucleosome positioning data |
| Q34057341 | Three-dimensional modeling of chromatin structure from interaction frequency data using Markov chain Monte Carlo sampling |
Search more.