| P2093 | author name string | Jocelyn E Krebs | |
| | Oya Yazgan | |
| P2860 | cites work | Distinguishing protein-coding from non-coding RNAs through support vector machines | Q21145271 |
| | A new yeast poly(A) polymerase complex involved in RNA quality control | Q21146099 |
| | Complete sequencing and characterization of 21,243 full-length human cDNAs | Q21735916 |
| | A steroid receptor coactivator, SRA, functions as an RNA and is present in an SRC-1 complex | Q22009369 |
| | Fewer Genes, More Noncoding RNA | Q22065793 |
| | Non-coding RNA | Q22066043 |
| | Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene | Q22122492 |
| | The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation | Q24305243 |
| | Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression | Q24539974 |
| | Contribution of domain structure to the RNA 3' end processing and degradation functions of the nuclear exosome subunit Rrp6p | Q24540216 |
| | The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator | Q24548002 |
| | Transcriptional interference--a crash course | Q24606100 |
| | The Air noncoding RNA: an imprinted cis-silencing transcript | Q24610062 |
| | Transcription of bxd noncoding RNAs promoted by trithorax represses Ubx in cis by transcriptional interference | Q24671716 |
| | Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA | Q24676670 |
| | RNAdb--a comprehensive mammalian noncoding RNA database | Q24795939 |
| | Evidence for abundant transcription of non-coding regions in the Saccharomyces cerevisiae genome | Q24815519 |
| | The transcriptional landscape of the mammalian genome | Q27861110 |
| | Trf4 and Trf5 proteins of Saccharomyces cerevisiae exhibit poly(A) RNA polymerase activity but no DNA polymerase activity | Q27930373 |
| | Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase | Q27932117 |
| | Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome | Q27932187 |
| | RNA degradation by the exosome is promoted by a nuclear polyadenylation complex | Q27932438 |
| | Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3. | Q27938518 |
| | Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs | Q28131821 |
| | The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription | Q28206012 |
| | Thioredoxin post-transcriptional regulation by H19 provides a new function to mRNA-like non-coding RNA | Q28207541 |
| | RNA-quality control by the exosome | Q28251052 |
| | H19 mRNA-like noncoding RNA promotes breast cancer cell proliferation through positive control by E2F1 | Q28258735 |
| | Genome Network and FANTOM3: assessing the complexity of the transcriptome | Q28768104 |
| | Antisense transcription in the mammalian transcriptome | Q29547536 |
| | MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer | Q29620125 |
| | A high-resolution map of transcription in the yeast genome | Q30014822 |
| | Clusters of internally primed transcripts reveal novel long noncoding RNAs | Q33242811 |
| | Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs | Q33242821 |
| | Comprehensive comparisons of the current human, mouse, and rat RefSeq, Ensembl, EST, and FANTOM3 datasets: identification of new human genes with specific tissue expression profile | Q33253685 |
| | Non coding RNA and brain | Q33264219 |
| | Ashbya Genome Database 3.0: a cross-species genome and transcriptome browser for yeast biologists | Q33268696 |
| | Radiation leukemia virus common integration at the Kis2 locus: simultaneous overexpression of a novel noncoding RNA and of the proximal Phf6 gene | Q33930366 |
| | Long-range DNase I hypersensitivity mapping reveals the imprinted Igf2r and Air promoters share cis-regulatory elements. | Q34056081 |
| | Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome | Q34324184 |
| | Developmental regulation of EVF-1, a novel non-coding RNA transcribed upstream of the mouse Dlx6 gene | Q34325273 |
| | Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer | Q34329540 |
| | Identification and characterization of a novel, psoriasis susceptibility-related noncoding RNA gene, PRINS. | Q34414021 |
| | Dynamic developmental regulation of the large non-coding RNA associated with the mouse 7C imprinted chromosomal region. | Q34446311 |
| | Sequence-based heuristics for faster annotation of non-coding RNA families. | Q34464822 |
| | Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function | Q34467942 |
| | The expanding transcriptome: the genome as the 'Book of Sand' | Q34468315 |
| | Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae | Q34480038 |
| | STRAL: progressive alignment of non-coding RNA using base pairing probability vectors in quadratic time | Q34513713 |
| | Non-coding-RNA regulators of RNA polymerase II transcription | Q34530471 |
| | Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance | Q34566149 |
| | Gene control by large noncoding RNAs | Q34571336 |
| | Identification of a novel non-coding RNA, MIAT, that confers risk of myocardial infarction | Q34576832 |
| | Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript | Q34604327 |
| | Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray | Q34658126 |
| | Epigenetic gene regulation by noncoding RNAs | Q35145814 |
| | fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences | Q35179241 |
| | Prediction of trans-antisense transcripts in Arabidopsis thaliana | Q35630264 |
| | Cytoplasmic decay of intergenic transcripts in Saccharomyces cerevisiae | Q35641725 |
| | Dynamic transcriptome of mice | Q35707727 |
| | MicroRNAs: a developing story | Q36083275 |
| | Non-coding RNAs: new players in eukaryotic biology | Q36235823 |
| | Activation of the RNA-dependent protein kinase (PKR) of lymphocytes by regulatory RNAs: implications for immunomodulation in HIV infection | Q36297780 |
| | siRNA-mediated transcriptional gene silencing: the potential mechanism and a possible role in the histone code | Q36325641 |
| | Cellular dynamics of small RNAs | Q36385395 |
| | The vertebrate E1/U17 small nucleolar ribonucleoprotein particle | Q36395302 |
| | The H19 gene: regulation and function of a non-coding RNA. | Q36436572 |
| | Brain-specific small nucleolar RNAs. | Q36470533 |
| | tRNA, new aspects in intracellular dynamics | Q36516465 |
| | The complexity of the mammalian transcriptome | Q36542378 |
| | Non-coding RNA in fly dosage compensation | Q36557059 |
| | SnoRNP biogenesis meets Pre-mRNA splicing | Q36594405 |
| | Adenovirus VA1 noncoding RNA can inhibit small interfering RNA and MicroRNA biogenesis | Q37596477 |
| | Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae. | Q39705425 |
| | More than 40,000 transcripts, including novel and noncoding transcripts, in mouse embryonic stem cells | Q40258037 |
| | Analysis of a new homozygous deletion in the tumor suppressor region at 3p12.3 reveals two novel intronic noncoding RNA genes | Q40293903 |
| | Antisense transcription controls cell fate in Saccharomyces cerevisiae | Q42603749 |
| | Non-coding RNA directed DNA demethylation of Sphk1 CpG island. | Q45027265 |
| | Widespread distribution of antisense transcripts in the Plasmodium falciparum genome | Q45293578 |
| | The spinocerebellar ataxia 8 noncoding RNA causes neurodegeneration and associates with staufen in Drosophila. | Q51029862 |
| | The transcriptome of the sea urchin embryo. | Q52002229 |
| | A noncoding RNA is required for the repression of RNApolII-dependent transcription in primordial germ cells. | Q52094692 |
| | Identification and expression analysis of putative mRNA-like non-coding RNA in Drosophila. | Q52662953 |
| | Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome | Q56272005 |
| | The Functional Genomics of Noncoding RNA | Q57020001 |
| P433 | issue | 4 | |
| P304 | page(s) | 484-496 | |
| P577 | publication date | 2007-08-01 | |
| P1433 | published in | Biochemistry and Cell Biology | Q4914719 |
| P1476 | title | Noncoding but nonexpendable: transcriptional regulation by large noncoding RNA in eukaryotes | |
| P478 | volume | 85 | |