| scholarly article | Q13442814 |
| P2093 | author name string | Aswin Sai Narain Seshasayee | |
| Supriya Khedkar | |||
| P2860 | cites work | 50 Million Years of Genomic Stasis in Endosymbiotic Bacteria | Q22065832 |
| MEGA6: Molecular Evolutionary Genetics Analysis version 6.0 | Q24498082 | ||
| HMMER web server: interactive sequence similarity searching | Q24603071 | ||
| Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy | Q24603196 | ||
| MUSCLE: multiple sequence alignment with high accuracy and high throughput | Q24613456 | ||
| Chromosome organization by a nucleoid-associated protein in live bacteria | Q24634543 | ||
| Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world | Q24653367 | ||
| Evidence for symmetric chromosomal inversions around the replication origin in bacteria | Q24791763 | ||
| Evolution of gene order conservation in prokaryotes | Q24800105 | ||
| The shape of the DNA minor groove directs binding by the DNA-bending protein Fis | Q27660559 | ||
| Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome | Q27682901 | ||
| Improved microbial gene identification with GLIMMER | Q27860463 | ||
| EMBOSS: the European Molecular Biology Open Software Suite | Q27860491 | ||
| A general method applicable to the search for similarities in the amino acid sequence of two proteins | Q27860563 | ||
| Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees | Q27861060 | ||
| Capturing chromosome conformation | Q28201750 | ||
| Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulation | Q33263766 | ||
| Chromosome structuring limits genome plasticity in Escherichia coli. | Q33310743 | ||
| The systemic imprint of growth and its uses in ecological (meta)genomics | Q33525509 | ||
| A divalent switch drives H-NS/DNA-binding conformations between stiffening and bridging modes. | Q33631136 | ||
| Characterization and development of photoactivatable fluorescent proteins for single-molecule-based superresolution imaging | Q33767568 | ||
| rRNA operon copy number reflects ecological strategies of bacteria | Q33986862 | ||
| Bacillus subtilis chromosome organization oscillates between two distinct patterns | Q34144278 | ||
| Chromosome replication and the division cycle of Escherichia coli B/r. | Q34220500 | ||
| Interlinked sister chromosomes arise in the absence of condensin during fast replication in B. subtilis | Q41939489 | ||
| Polymer modeling of the E. coli genome reveals the involvement of locus positioning and macrodomain structuring for the control of chromosome conformation and segregation. | Q41941265 | ||
| The E. coli cell cycle and the plasmid R1 replication cycle in the absence of the DnaA protein | Q42057261 | ||
| Accelerated growth in the absence of DNA replication origins | Q42258104 | ||
| Independent positioning and action of Escherichia coli replisomes in live cells | Q43107450 | ||
| DoriC: a database of oriC regions in bacterial genomes | Q44084887 | ||
| Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes. | Q44244250 | ||
| Gene silencing and large-scale domain structure of the E. coli genome. | Q46189959 | ||
| Genomic organization of evolutionarily correlated genes in bacteria: limits and strategies | Q46331221 | ||
| Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging. | Q46681388 | ||
| A systematic in vitro study of nucleoprotein complexes formed by bacterial nucleoid-associated proteins revealing novel types of DNA organization. | Q51790300 | ||
| The distribution of RNA polymerase in Escherichia coli is dynamic and sensitive to environmental cues. | Q51790730 | ||
| Evolution of prokaryotic gene order: genome rearrangements in closely related species. | Q52542073 | ||
| The MatP/matS site-specific system organizes the terminus region of the E. coli chromosome into a macrodomain. | Q53441904 | ||
| The Escherichia coli chromosome is organized with the left and right chromosome arms in separate cell halves. | Q53595448 | ||
| Replication-associated gene dosage effects shape the genomes of fast-growing bacteria but only for transcription and translation genes | Q57618461 | ||
| Extra-chromosomal elements and the evolution of cellular DNA replication machineries | Q63383566 | ||
| Suppression of gamma ray-induced illegitimate recombination in Escherichia coli by the DNA-binding protein H-NS | Q64388137 | ||
| Escherichia coli DNA topoisomerase I mutants: Increased supercoiling is corrected by mutations near gyrase genes | Q67265169 | ||
| Genome architecture and global gene regulation in bacteria: making progress towards a unified model? | Q86523950 | ||
| High-resolution mapping of the spatial organization of a bacterial chromosome | Q34380184 | ||
| Three-dimensional genome architecture influences partner selection for chromosomal translocations in human disease | Q34426962 | ||
| A New Noncoding RNA Arranges Bacterial Chromosome Organization | Q34490977 | ||
| Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands | Q34546996 | ||
| Microbial genome evolution: sources of variability | Q34921855 | ||
| Chromosome organization and replisome dynamics in Mycobacterium smegmatis | Q35111096 | ||
| Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms | Q35239766 | ||
| End of the beginning: elongation and termination features of alternative modes of chromosomal replication initiation in bacteria | Q35539851 | ||
| Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle | Q35673712 | ||
| The replication-related organization of bacterial genomes. | Q35796723 | ||
| Chromosomal Arrangement of Phosphorelay Genes Couples Sporulation and DNA Replication. | Q35863942 | ||
| Galactose repressor mediated intersegmental chromosomal connections in Escherichia coli | Q36094127 | ||
| Gene location affects expression level in Salmonella typhimurium | Q36239101 | ||
| Genome scale patterns of supercoiling in a bacterial chromosome. | Q36765256 | ||
| Genome conformation capture reveals that the Escherichia coli chromosome is organized by replication and transcription | Q36963303 | ||
| The organization of the bacterial genome. | Q37208839 | ||
| Metabolic-network-driven analysis of bacterial ecological strategies | Q37282861 | ||
| Gene essentiality determines chromosome organisation in bacteria | Q37371268 | ||
| The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation | Q37418606 | ||
| Macrodomain organization of the Escherichia coli chromosome. | Q37592872 | ||
| The SMC condensin complex is required for origin segregation in Bacillus subtilis. | Q37627363 | ||
| The chromatin-associated protein H-NS alters DNA topology in vitro | Q37627511 | ||
| Bacterial nucleoid-associated proteins, nucleoid structure and gene expression | Q37688895 | ||
| Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression | Q37800563 | ||
| Genome rearrangement by replication-directed translocation | Q37875580 | ||
| Spatial organization of transcription in bacterial cells. | Q38215009 | ||
| New approaches to understanding the spatial organization of bacterial genomes. | Q38259134 | ||
| From structure to function of bacterial chromosomes: Evolutionary perspectives and ideas for new experiments | Q38546696 | ||
| Exploring the mechanisms of genome-wide long-range interactions: interpreting chromosome organization. | Q38697271 | ||
| The Escherichia coli Fis Protein Stimulates Bacteriophage λ Integrative Recombination In Vitro | Q39749055 | ||
| rRNA operon multiplicity in Escherichia coli and the physiological implications of rrn inactivation | Q39837636 | ||
| Nonrandom F-plasmid replication in Escherichia coli K-12 | Q39933459 | ||
| The Consequences of Replicating in the Wrong Orientation: Bacterial Chromosome Duplication without an Active Replication Origin | Q40360421 | ||
| Mechanisms of transcription-replication collisions in bacteria | Q40890748 | ||
| Chromosome position effects on gene expression in Escherichia coli K-12. | Q41744412 | ||
| Regulatory consequences of gene translocation in bacteria | Q41852792 | ||
| The two Escherichia coli chromosome arms locate to separate cell halves | Q41884613 | ||
| P433 | issue | 6 | |
| P921 | main subject | comparative genomics | Q1147112 |
| P304 | page(s) | 1597-1606 | |
| P577 | publication date | 2016-03-30 | |
| P1433 | published in | G3 | Q5512701 |
| P1476 | title | Comparative Genomics of Interreplichore Translocations in Bacteria: A Measure of Chromosome Topology? | |
| P478 | volume | 6 |
| Q37532855 | Bioinformatic Analyses of Unique (Orphan) Core Genes of the Genus Acidithiobacillus: Functional Inferences and Use As Molecular Probes for Genomic and Metagenomic/Transcriptomic Interrogation |
| Q91623580 | Clustered Core- and Pan-Genome Content on Rhodobacteraceae Chromosomes |
| Q89899831 | Laboratory Evolution Experiments Help Identify a Predominant Region of Constitutive Stable DNA Replication Initiation |
| Q53241306 | Non-Random Inversion Landscapes in Prokaryotic Genomes Are Shaped by Heterogeneous Selection Pressures. |
| Q41170183 | The Transcriptome of Streptococcus pneumoniae Induced by Local and Global Changes in Supercoiling |
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