scholarly article | Q13442814 |
P2093 | author name string | Jeffrey J DeStefano | |
Deena T Jacob | |||
P2860 | cites work | Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA:DNA | Q24545723 |
Selection of primer-template sequences that bind human immunodeficiency virus reverse transcriptase with high affinity | Q25257467 | ||
NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform | Q27624968 | ||
A mechanism for plus-strand transfer enhancement by the HIV-1 nucleocapsid protein during reverse transcription | Q27625600 | ||
NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition | Q27625936 | ||
Structure of the HIV-1 nucleocapsid protein bound to the SL3 psi-RNA recognition element | Q27748786 | ||
Control of initiation of viral plus strand DNA synthesis by HIV reverse transcriptase | Q38339110 | ||
Effect of human immunodeficiency virus type 1 (HIV-1) nucleocapsid protein on HIV-1 reverse transcriptase activity in vitro | Q38362867 | ||
Role of the N-terminal zinc finger of human immunodeficiency virus type 1 nucleocapsid protein in virus structure and replication | Q39578721 | ||
Roles of the human immunodeficiency virus type 1 nucleocapsid protein in annealing and initiation versus elongation in reverse transcription of viral negative-strand strong-stop DNA | Q39582290 | ||
Requirements for strand transfer between internal regions of heteropolymer templates by human immunodeficiency virus reverse transcriptase | Q40060658 | ||
The orientation of binding of human immunodeficiency virus reverse transcriptase on nucleic acid hybrids | Q40396110 | ||
Quantitative analysis of RNA cleavage during RNAdirected DNA synthesis by human immunodeficiency and avian myeloblastosis virus reverse transcriptases | Q40401252 | ||
Interactions between HIV-1 nucleocapsid protein and viral DNA may have important functions in the viral life cycle | Q40405392 | ||
Determinants of the RNase H cleavage specificity of human immunodeficiency virus reverse transcriptase | Q40410001 | ||
Transactivation of the minus-strand DNA transfer by nucleocapsid protein during reverse transcription of the retroviral genome. | Q40790993 | ||
Target specificity of human immunodeficiency virus type 1 NCp7 requires an intact conformation of its CCHC N-terminal zinc finger. | Q40886902 | ||
Point mutations in conserved amino acid residues within the C-terminal domain of HIV-1 reverse transcriptase specifically repress RNase H function | Q42078934 | ||
Role of distal zinc finger of nucleocapsid protein in genomic RNA dimerization of human immunodeficiency virus type 1; no role for the palindrome crowning the R-U5 hairpin | Q42643768 | ||
Substrate requirements for secondary cleavage by HIV-1 reverse transcriptase RNase H. | Q43414224 | ||
Interaction of human immunodeficiency virus nucleocapsid protein with a structure mimicking a replication intermediate. Effects on stability, reverse transcriptase binding, and strand transfer | Q43638285 | ||
Pre-existing distortions in nucleic acid structure aid polypurine tract selection by HIV-1 reverse transcriptase | Q43903247 | ||
Conformational changes between human immunodeficiency virus type 1 nucleocapsid protein NCp7 and its precursor NCp15 as detected by anti-NCp7 monoclonal antibodies | Q44187086 | ||
Ordered aggregation of ribonucleic acids by the human immunodeficiency virus type 1 nucleocapsid protein. | Q44821597 | ||
Role of the zinc fingers of HIV-1 nucleocapsid protein in maturation of genomic RNA. | Q44853687 | ||
Properties and growth mechanism of the ordered aggregation of a model RNA by the HIV-1 nucleocapsid protein: an electron microscopy investigation | Q44987232 | ||
The single-finger nucleocapsid protein of moloney murine leukemia virus binds and destabilizes the TAR sequences of HIV-1 but does not promote efficiently their annealing | Q45399144 | ||
Differing roles of the N- and C-terminal zinc fingers in human immunodeficiency virus nucleocapsid protein-enhanced nucleic acid annealing | Q45723126 | ||
RNA degradation and primer selection by Moloney murine leukemia virus reverse transcriptase contribute to the accuracy of plus strand initiation | Q45742892 | ||
Human immunodeficiency virus nucleocapsid protein accelerates strand transfer of the terminally redundant sequences involved in reverse transcription | Q45781894 | ||
Influence of human immunodeficiency virus nucleocapsid protein on synthesis and strand transfer by the reverse transcriptase in vitro | Q45789166 | ||
Human immunodeficiency virus nucleocapsid protein stimulates strand transfer from internal regions of heteropolymeric RNA templates | Q45790185 | ||
Recombinant human immunodeficiency virus type 1 nucleocapsid (NCp7) protein unwinds tRNA | Q45867512 | ||
MELTING, computing the melting temperature of nucleic acid duplex. | Q52049899 | ||
Mechanistic analysis of pause site-dependent and -independent recombinogenic strand transfer from structurally diverse regions of the HIV genome. | Q53635184 | ||
HIV nucleocapsid protein. Expression in Escherichia coli, purification, and characterization | Q72865453 | ||
Wild-type and mutant HIV type 1 nucleocapsid proteins increase the proportion of long cDNA transcripts by viral reverse transcriptase | Q73307812 | ||
Steps of the acceptor invasion mechanism for HIV-1 minus strand strong stop transfer | Q73703008 | ||
Physical mapping of HIV reverse transcriptase to the 5' end of RNA primers | Q74147662 | ||
Kinetic analysis of the effect of HIV nucleocapsid protein (NCp) on internal strand transfer reactions | Q77357856 | ||
Involvement of HIV-I nucleocapsid protein in the recruitment of reverse transcriptase into nucleoprotein complexes formed in vitro | Q77631083 | ||
A second origin of DNA plus-strand synthesis is required for optimal human immunodeficiency virus replication | Q28646734 | ||
Human immunodeficiency virus type 1 preintegration complexes containing discontinuous plus strands are competent to integrate in vitro | Q28646839 | ||
Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA | Q29620616 | ||
Coupled integration of human immunodeficiency virus type 1 cDNA ends by purified integrase in vitro: stimulation by the viral nucleocapsid protein | Q30453495 | ||
The role of Pr55(gag) in the annealing of tRNA3Lys to human immunodeficiency virus type 1 genomic RNA | Q30453508 | ||
High-level expression and purification of untagged and histidine-tagged HIV-1 reverse transcriptase. | Q33197517 | ||
Zinc finger structures in the human immunodeficiency virus type 1 nucleocapsid protein facilitate efficient minus- and plus-strand transfer | Q33604321 | ||
Protein-RNA recognition | Q33638761 | ||
The human immunodeficiency virus type 1 Gag polyprotein has nucleic acid chaperone activity: possible role in dimerization of genomic RNA and placement of tRNA on the primer binding site | Q33647840 | ||
Effect of polypurine tract (PPT) mutations on human immunodeficiency virus type 1 replication: a virus with a completely randomized PPT retains low infectivity | Q33788773 | ||
Proteolytic processing of the p2/nucleocapsid cleavage site is critical for human immunodeficiency virus type 1 RNA dimer maturation. | Q33845445 | ||
Specific zinc-finger architecture required for HIV-1 nucleocapsid protein's nucleic acid chaperone function | Q34065314 | ||
Sequence, distance, and accessibility are determinants of 5'-end-directed cleavages by retroviral RNases H. | Q34333528 | ||
Structural and functional properties of the HIV-1 RNA-tRNA(Lys)3 primer complex annealed by the nucleocapsid protein: comparison with the heat-annealed complex | Q34364188 | ||
Human immunodeficiency virus type 1 nucleocapsid zn(2+) fingers are required for efficient reverse transcription, initial integration processes, and protection of newly synthesized viral DNA. | Q34464770 | ||
Subtle alterations of the native zinc finger structures have dramatic effects on the nucleic acid chaperone activity of human immunodeficiency virus type 1 nucleocapsid protein | Q34999333 | ||
Synthesis of plus strands of retroviral DNA in cells infected with avian sarcoma virus and mouse mammary tumor virus | Q35235206 | ||
Unique progressive cleavage mechanism of HIV reverse transcriptase RNase H | Q35360809 | ||
'Binding, bending and bonding': polypurine tract-primed initiation of plus-strand DNA synthesis in human immunodeficiency virus | Q35796073 | ||
Sequence and structural determinants required for priming of plus-strand DNA synthesis by the human immunodeficiency virus type 1 polypurine tract. | Q35866117 | ||
Evidence from CD spectra that d(purine).r(pyrimidine) and r(purine).d(pyrimidine) hybrids are in different structural classes | Q35870906 | ||
Human immunodeficiency virus type 1 nucleocapsid protein promotes efficient strand transfer and specific viral DNA synthesis by inhibiting TAR-dependent self-priming from minus-strand strong-stop DNA. | Q35888060 | ||
Human immunodeficiency virus type 1 nucleocapsid protein specifically stimulates Mg2+-dependent DNA integration in vitro | Q35890609 | ||
Effects of nucleic acid local structure and magnesium ions on minus-strand transfer mediated by the nucleic acid chaperone activity of HIV-1 nucleocapsid protein | Q35891627 | ||
Nucleic acid chaperone activity of HIV-1 nucleocapsid protein: critical role in reverse transcription and molecular mechanism | Q36258296 | ||
Discontinuous plus-strand DNA synthesis in human immunodeficiency virus type 1-infected cells and in a partially reconstituted cell-free system | Q36548782 | ||
Evidence that a central domain of nucleocapsid protein is required for RNA packaging in murine leukemia virus | Q36635629 | ||
The two zinc fingers in the human immunodeficiency virus type 1 nucleocapsid protein are not functionally equivalent | Q36650013 | ||
A single-stranded gap in human immunodeficiency virus unintegrated linear DNA defined by a central copy of the polypurine tract. | Q36688827 | ||
Structure/function mapping of amino acids in the N-terminal zinc finger of the human immunodeficiency virus type 1 nucleocapsid protein: residues responsible for nucleic acid helix destabilizing activity | Q36791048 | ||
In vitro synthesis of long DNA products in reactions with HIV-RT and nucleocapsid protein | Q36804480 | ||
HIV-1 nucleocapsid protein induces "maturation" of dimeric retroviral RNA in vitro | Q37427179 | ||
Use of an oligoribonucleotide containing the polypurine tract sequence as a primer by HIV reverse transcriptase | Q38288991 | ||
Formation of stable and functional HIV-1 nucleoprotein complexes in vitro | Q38290544 | ||
P433 | issue | 2 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | viral nucleocapsid | Q4384107 |
HIV | Q15787 | ||
P1104 | number of pages | 12 | |
P304 | page(s) | 385-396 | |
P577 | publication date | 2008-07-15 | |
P1433 | published in | Virology | Q7934867 |
P1476 | title | A new role for HIV nucleocapsid protein in modulating the specificity of plus strand priming | |
P478 | volume | 378 |
Q36553297 | A protein ballet around the viral genome orchestrated by HIV-1 reverse transcriptase leads to an architectural switch: from nucleocapsid-condensed RNA to Vpr-bridged DNA. |
Q47552849 | An Evolutionary/Biochemical Connection Between Promoter- and Primer-Dependent Polymerases Revealed by Selective Evolution of Ligands by Exponential Enrichment (SELEX). |
Q38022377 | Comparative nucleic acid chaperone properties of the nucleocapsid protein NCp7 and Tat protein of HIV-1. |
Q37149739 | Fidelity of plus-strand priming requires the nucleic acid chaperone activity of HIV-1 nucleocapsid protein |
Q37945202 | Implications of the nucleocapsid and the microenvironment in retroviral reverse transcription. |
Q35705540 | Nucleocapsid protein annealing of a primer-template enhances (+)-strand DNA synthesis and fidelity by HIV-1 reverse transcriptase |
Q34775658 | Role of HIV-1 nucleocapsid protein in HIV-1 reverse transcription |
Q38335419 | Specific implications of the HIV-1 nucleocapsid zinc fingers in the annealing of the primer binding site complementary sequences during the obligatory plus strand transfer. |
Q34358865 | Viral reverse transcriptases show selective high affinity binding to DNA-DNA primer-templates that resemble the polypurine tract. |
Q36625767 | Zinc finger function of HIV-1 nucleocapsid protein is required for removal of 5'-terminal genomic RNA fragments: a paradigm for RNA removal reactions in HIV-1 reverse transcription. |