Global transcriptome changes in perennial ryegrass during early infection by pink snow mould

scientific article published on 27 June 2016

Global transcriptome changes in perennial ryegrass during early infection by pink snow mould is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1015710678
P356DOI10.1038/SREP28702
P932PMC publication ID4921834
P698PubMed publication ID27346054

P50authorMallikarjuna Rao KoviQ61793746
P2093author name stringIngerd Skow Hofgaard
Torben Asp
Odd Arne Rognli
May Bente Brurberg
Anne Marte Tronsmo
Anil Kunapareddy
Åshild Ergon
Mohamed Abdelhalim
P2860cites workBlast2GO: A comprehensive suite for functional analysis in plant genomicsQ21342816
Full-length transcriptome assembly from RNA-Seq data without a reference genomeQ24620766
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiationQ24627354
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT MethodQ25938999
Plant cell wall dynamics and wall-related susceptibility in plant-pathogen interactionsQ27004348
edgeR: a Bioconductor package for differential expression analysis of digital gene expression dataQ27860819
The plant immune systemQ28131801
Next-generation DNA sequencingQ29547447
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genomeQ29547458
Salicylic acid induction-deficient mutants of Arabidopsis express PR-2 and PR-5 and accumulate high levels of camalexin after pathogen inoculation.Q54082177
Phylogenetic analysis of EF-1 alpha gene sequences from isolates of Microdochium nivale leads to elevation of varieties majus and nivale to species status.Q54641928
Early steps in cold sensing by plant cells: the role of actin cytoskeleton and membrane fluidityQ57371108
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomesQ29547486
WEGO: a web tool for plotting GO annotationsQ29616658
A genomic approach to identify regulatory nodes in the transcriptional network of systemic acquired resistance in plantsQ33263250
Protein kinases in the plant defence responseQ34399368
VennPlex--a novel Venn diagram program for comparing and visualizing datasets with differentially regulated datapointsQ34545000
De novo transcriptome sequence assembly and analysis of RNA silencing genes of Nicotiana benthamianaQ34651478
De novo transcriptome assembly for a non-model species, the blood-sucking bug Triatoma brasiliensis, a vector of Chagas diseaseQ35262504
Lignin metabolism has a central role in the resistance of cotton to the wilt fungus Verticillium dahliae as revealed by RNA-Seq-dependent transcriptional analysis and histochemistry.Q35570121
Plant actin-related proteinsQ35737996
Real-time PCR: what relevance to plant studies?Q35811627
Analysis of the Prefoldin Gene Family in 14 Plant SpeciesQ36687891
Networks of WRKY transcription factors in defense signaling.Q36888216
Plant NB-LRR immune receptors: from recognition to transcriptional reprogrammingQ37105837
The effect of potassium nutrition on pest and disease resistance in plants.Q37106613
Plant pathogenesis-related (PR) proteins: a focus on PR peptides.Q37233373
Functional insights of nucleocytoplasmic transport in plants.Q37692904
Molecular mechanisms underlying frost tolerance in perennial grasses adapted to cold climates.Q37855280
Strategies for transcriptome analysis in nonmodel plantsQ37981054
Post-translational regulation of WRKY transcription factors in plant immunity.Q37994423
Expression profiles of the Arabidopsis WRKY gene superfamily during plant defense responseQ38357358
Independently evolved virulence effectors converge onto hubs in a plant immune system networkQ38367812
Functional studies of transcription factors involved in plant defenses in the genomics era.Q38404051
Low temperature induced defence gene expression in winter wheat in relation to resistance to snow moulds and other wheat diseasesQ39113780
Prefoldins 3 and 5 play an essential role in Arabidopsis tolerance to salt stress.Q39405115
Catalyzing plant science research with RNA-seqQ39455397
Photosynthesis-dependent physiological and genetic crosstalk between cold acclimation and cold-induced resistance to fungal pathogens in triticale (Triticosecale Wittm.).Q41457692
Overexpression of GmAKT2 potassium channel enhances resistance to soybean mosaic virusQ41460121
The transcriptome of Verticillium dahliae-infected Nicotiana benthamiana determined by deep RNA sequencingQ41478182
Roles of higher plant K+ channelsQ41581121
Deletion of the fungal gene soft disrupts mutualistic symbiosis between the grass endophyte Epichloë festucae and the host plant.Q41901928
De novo assembly of the perennial ryegrass transcriptome using an RNA-Seq strategy.Q42084277
Glycerol-3-phosphate levels are associated with basal resistance to the hemibiotrophic fungus Colletotrichum higginsianum in Arabidopsis.Q42437657
Tomato susceptibility to root-knot nematodes requires an intact jasmonic acid signaling pathwayQ42440170
The actin-related Protein2/3 complex regulates mitochondrial-associated calcium signaling during salt stress in ArabidopsisQ44261458
MADS-box genes from perennial ryegrass differentially expressed during transition from vegetative to reproductive growthQ47647429
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesedgeRQ113334690
P407language of work or nameEnglishQ1860
P921main subjectsnowQ7561
transcriptomeQ252857
P304page(s)28702
P577publication date2016-06-27
P1433published inScientific ReportsQ2261792
P1476titleGlobal transcriptome changes in perennial ryegrass during early infection by pink snow mould
P478volume6

Reverse relations

cites work (P2860)
Q38436001De novo and reference transcriptome assembly of transcripts expressed during flowering provide insight into seed setting in tetraploid red clover
Q38731019Transcriptome Analysis Reveals Differential Gene Expression and a Possible Role of Gibberellins in a Shade-Tolerant Mutant of Perennial Ryegrass

Search more.