Global Transcriptomic Analysis Reveals the Mechanism of Phelipanche aegyptiaca Seed Germination

scientific article published on 15 July 2016

Global Transcriptomic Analysis Reveals the Mechanism of Phelipanche aegyptiaca Seed Germination is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3390/IJMS17071139
P932PMC publication ID4964512
P698PubMed publication ID27428962

P2093author name stringYing Xu
Fang Tian
Xiaolei Cao
Meixiu Chen
Sifeng Zhao
Zhaoqun Yao
Benchun Xiang
P2860cites workThe strigolactone germination stimulants of the plant-parasitic Striga and Orobanche spp. are derived from the carotenoid pathwayQ24535738
Genome sequencing in microfabricated high-density picolitre reactorsQ24544260
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
Full-length transcriptome assembly from RNA-Seq data without a reference genomeQ24620766
Cluster analysis and display of genome-wide expression patternsQ24644463
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT MethodQ25938999
Protein repair L-isoaspartyl methyltransferase 1 is involved in both seed longevity and germination vigor in ArabidopsisQ82617246
Regulation of seed germination in the close Arabidopsis relative Lepidium sativum: a global tissue-specific transcript analysisQ83411513
Strigolactone Deficiency Confers Resistance in Tomato Line SL-ORT1 to the Parasitic Weeds Phelipanche and Orobanche sppQ85187656
The Arabidopsis MYB96 transcription factor plays a role in seed dormancyQ86589296
The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination.Q44816982
Arabidopsis CYP85A2, a cytochrome P450, mediates the Baeyer-Villiger oxidation of castasterone to brassinolide in brassinosteroid biosynthesisQ46604628
GABA shunt and polyamine degradation pathway on γ-aminobutyric acid accumulation in germinating fava bean (Vicia faba L.) under hypoxiaQ46759174
Simultaneous determination of multiple phytohormones in plant extracts by liquid chromatography-electrospray tandem mass spectrometryQ46773736
Transcriptomes of the parasitic plant family Orobanchaceae reveal surprising conservation of chlorophyll synthesisQ46841180
ABI4: versatile activator and repressor.Q50773928
Selection of housekeeping genes for normalization by real-time RT-PCR: analysis of Or-MYB1 gene expression in Orobanche ramosa development.Q53038792
CbCBF from Capsella bursa-pastoris enhances cold tolerance and restrains growth in Nicotiana tabacum by antagonizing with gibberellin and affecting cell cycle signaling.Q53769945
Arabidopsis decapping 5 is required for mRNA decapping, P-body formation, and translational repression during postembryonic development.Q54457563
Induction of systemic acquired resistance against rust, ascochyta blight and broomrape in faba bean by exogenous application of salicylic acid and benzothiadiazoleQ57360140
New insights on the barrel medic MtOGG1 and MtFPG functions in relation to oxidative stress response in planta and during seed imbibitionQ60167679
Arbuscular mycorrhizal symbiosis decreases strigolactone production in tomatoQ61451228
Fluridone and norflurazon, carotenoid-biosynthesis inhibitors, promote seed conditioning and germination of the holoparasite Orobanche minorQ79801967
Structure-function analysis identifies highly sensitive strigolactone receptors in StrigaQ27702261
Pfam: the protein families databaseQ28660698
Java Treeview--extensible visualization of microarray dataQ29547226
KAAS: an automatic genome annotation and pathway reconstruction serverQ29617232
Functional genomics of a generalist parasitic plant: laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression.Q30419781
De novo assembly and characterization of the transcriptome of the parasitic weed dodder identifies genes associated with plant parasitism.Q31147454
Spatial patterns of gene expression in Brassica napus seedlings: identification of a cortex-specific gene and localization of mRNAs encoding isocitrate lyase and a polypeptide homologous to proteinasesQ33359346
A transcriptomic approach to identify regulatory genes involved in fruit set of wild-type and parthenocarpic tomato genotypesQ33361377
Cross-species approaches to seed dormancy and germination: conservation and biodiversity of ABA-regulated mechanisms and the Brassicaceae DOG1 genesQ33518668
Genome sequencing of the high oil crop sesame provides insight into oil biosynthesisQ33742120
RNA-Seq analysis in MeV.Q34041397
The evolution of parasitism in plantsQ34098535
Seed germination and vigor.Q34237687
De novo transcriptome assembly in chili pepper (Capsicum frutescens) to identify genes involved in the biosynthesis of capsaicinoidsQ34561972
The strigolactone storyQ34622203
Nicotinamidase activity is important for germination.Q34640962
De novo transcriptome sequence assembly and analysis of RNA silencing genes of Nicotiana benthamianaQ34651478
Strigolactones: ecological significance and use as a target for parasitic plant control.Q34912298
Transcriptome sequencing and differential gene expression analysis of delayed gland morphogenesis in Gossypium australe during seed germinationQ35000863
The expression of serine carboxypeptidases during maturation and germination of the barley grainQ35688408
ABA crosstalk with ethylene and nitric oxide in seed dormancy and germinationQ36715219
Pentatricopeptide repeat proteins: a socket set for organelle gene expression.Q37323947
Observations on the current status of Orobanche and Striga problems worldwideQ37389407
Transcriptome analysis during seed germination of elite Chinese bread wheat cultivar Jimai 20.Q37581992
Axillary bud outgrowth in herbaceous shoots: how do strigolactones fit into the picture?Q37683563
Host plant resistance to parasitic weeds; recent progress and bottlenecks.Q37772353
First off the mark: early seed germinationQ37856600
Beyond gibberellins and abscisic acid: how ethylene and jasmonates control seed germination.Q37951745
The biology of strigolactonesQ38062628
Receptors, repressors, PINs: a playground for strigolactone signalingQ38231131
Mapping metabolic and transcript temporal switches during germination in rice highlights specific transcription factors and the role of RNA instability in the germination processQ38358205
PARASITIC PLANTS. Probing strigolactone receptors in Striga hermonthica with fluorescenceQ40621717
Seed response to strigolactone is controlled by abscisic acid-independent DNA methylation in the obligate root parasitic plant, Phelipanche ramosa L. PomelQ41143008
Transformation and regeneration of the holoparasitic plant Phelipanche aegyptiaca.Q41469679
PrCYP707A1, an ABA catabolic gene, is a key component of Phelipanche ramosa seed germination in response to the strigolactone analogue GR24.Q41828085
An improved axenic system for studying pre-infection development of the parasitic plant Orobanche ramosaQ42019617
Ethylene interacts with abscisic acid to regulate endosperm rupture during germination: a comparative approach using Lepidium sativum and Arabidopsis thalianaQ43214461
SlCCD7 controls strigolactone biosynthesis, shoot branching and mycorrhiza-induced apocarotenoid formation in tomatoQ43257471
Suicidal germination for parasitic weed controlQ43930054
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P921main subjecttranscriptomeQ252857
Phelipanche aegyptiacaQ17716049
seed germinationQ22294580
P577publication date2016-07-15
P1433published inInternational Journal of Molecular SciencesQ3153277
P1476titleGlobal Transcriptomic Analysis Reveals the Mechanism of Phelipanche aegyptiaca Seed Germination
P478volume17

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cites work (P2860)
Q64095638ABA signaling components in Phelipanche aegyptiaca
Q64054238Comparative transcriptome analysis revealing the potential mechanism of seed germination stimulated by exogenous gibberellin in Fraxinus hupehensis
Q48022945Recent advances in the synthesis of analogues of phytohormones strigolactones with ring-closing metathesis as a key step
Q46269445Transcriptome analysis of Phelipanche aegyptiaca seed germination mechanisms stimulated by fluridone, TIS108, and GR24.

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