| scholarly article | Q13442814 |
| P50 | author | Gary Siuzdak | Q42143126 |
| P2093 | author name string | William R Wikoff | |
| Michael W W Adams | |||
| Ewa Kalisiak | |||
| Francis E Jenney | |||
| Aleksandar Cvetkovic | |||
| Sunia A Trauger | |||
| Angeli Lal Menon | |||
| Jeremy Praissman | |||
| Farris L Poole | |||
| Joseph W Scott | |||
| Saratchandra Shanmukh | |||
| John V Apon | |||
| P2860 | cites work | A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action | Q21203780 |
| CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes | Q21508827 | ||
| Improving yeast two-hybrid screening systems | Q22242948 | ||
| Functional organization of the yeast proteome by systematic analysis of protein complexes | Q24292209 | ||
| A hyperactive NAD(P)H:Rubredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus | Q24549184 | ||
| The use of gene clusters to infer functional coupling | Q24673189 | ||
| NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins | Q24676525 | ||
| Characterization of a fourth type of 2-keto acid-oxidizing enzyme from a hyperthermophilic archaeon: 2-ketoglutarate ferredoxin oxidoreductase from Thermococcus litoralis | Q24681692 | ||
| Characterization of 2-ketoisovalerate ferredoxin oxidoreductase, a new and reversible coenzyme A-dependent enzyme involved in peptide fermentation by hyperthermophilic archaea | Q24684715 | ||
| InterProScan: protein domains identifier | Q24812921 | ||
| A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding | Q25938984 | ||
| Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets | Q27638532 | ||
| Purification and characterization of pyruvate ferredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus | Q72941233 | ||
| DNA topoisomerases VI from hyperthermophilic archaea | Q73995642 | ||
| Both RadA and RadB are involved in homologous recombination in Pyrococcus furiosus | Q74025939 | ||
| A hot story from comparative genomics: reverse gyrase is the only hyperthermophile-specific protein | Q74238221 | ||
| Structural basis of RNA-dependent recruitment of glutamine to the genetic code | Q79816008 | ||
| Proteomic complex detection using sedimentation | Q79841069 | ||
| Protein-protein interactions in the archaeal transcriptional machinery: binding studies of isolated RNA polymerase subunits and transcription factors | Q80050442 | ||
| A sodium ion-dependent A1AO ATP synthase from the hyperthermophilic archaeon Pyrococcus furiosus | Q80575979 | ||
| Stabilization of Taq DNA polymerase at high temperature by protein folding pathways from a hyperthermophilic archaeon, Pyrococcus furiosus | Q81508062 | ||
| The Pyrococcus exosome complex: structural and functional characterization | Q82238390 | ||
| An archaeal protein homologous to mammalian SRP54 and bacterial Ffh recognizes a highly conserved region of SRP RNA. | Q43790582 | ||
| Maturation of [NiFe]-hydrogenases in Escherichia coli: the HypC cycle | Q44222226 | ||
| Functional properties of the protein disulfide oxidoreductase from the archaeon Pyrococcus furiosus: a member of a novel protein family related to protein disulfide-isomerase | Q45005592 | ||
| A "tagless" strategy for identification of stable protein complexes genome-wide by multidimensional orthogonal chromatographic separation and iTRAQ reagent tracking | Q46118159 | ||
| The cell as a collection of protein machines: preparing the next generation of molecular biologists | Q46148013 | ||
| Pyrococcus furiosus: large-scale cultivation and enzyme purification. | Q46387399 | ||
| A second novel dye-linked L-proline dehydrogenase complex is present in the hyperthermophilic archaeon Pyrococcus horikoshii OT-3. | Q46648358 | ||
| Structural basis for tRNA-dependent amidotransferase function. | Q46745511 | ||
| Expression and characterization of the chaperonin molecular machine from the hyperthermophilic archaeon Pyrococcus furiosus | Q47292299 | ||
| Two-dimensional blue native/SDS gel electrophoresis of multiprotein complexes from Helicobacter pylori. | Q50474343 | ||
| Characterization of hydrogenase from the hyperthermophilic archaebacterium, Pyrococcus furiosus. | Q50889399 | ||
| The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes. | Q52422256 | ||
| Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100�C | Q56443239 | ||
| Structure of a Nudix protein fromPyrobaculum aerophilumreveals a dimer with two intersubunit β-sheets | Q57909755 | ||
| Determinants of protein hyperthermostability: purification and amino acid sequence of rubredoxin from the hyperthermophilic archaebacterium Pyrococcus furiosus and secondary structure of the zinc adduct by NMR | Q68030538 | ||
| The purification, cloning, and high level expression of a glutaredoxin-like protein from the hyperthermophilic archaeon Pyrococcus furiosus | Q72631531 | ||
| A novel genetic system to detect protein-protein interactions | Q27860915 | ||
| A generic protein purification method for protein complex characterization and proteome exploration | Q27861087 | ||
| Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry | Q27861116 | ||
| The tandem affinity purification (TAP) method: a general procedure of protein complex purification | Q28131621 | ||
| Archaeal fructose-1,6-bisphosphate aldolases constitute a new family of archaeal type class I aldolase | Q28198747 | ||
| Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology | Q28201683 | ||
| 2-keto acid oxidoreductases from Pyrococcus furiosus and Thermococcus litoralis | Q28206430 | ||
| A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis | Q28492533 | ||
| Impact of substrate glycoside linkage and elemental sulfur on bioenergetics of and hydrogen production by the hyperthermophilic archaeon Pyrococcus furiosus | Q28756725 | ||
| A novel DNA polymerase in the hyperthermophilic archaeon,Pyrococcus furiosus: gene cloning, expression, and characterization | Q29030131 | ||
| IntAct--open source resource for molecular interaction data | Q29617575 | ||
| Replication protein A in Pyrococcus furiosus is involved in homologous DNA recombination | Q30667012 | ||
| The biochemical diversity of life near and above 100°C in marine environments | Q30993475 | ||
| Structure determination of a new protein from backbone-centered NMR data and NMR-assisted structure prediction | Q31056365 | ||
| Methionine aminopeptidase from the hyperthermophilic Archaeon Pyrococcus furiosus: molecular cloning and overexpression in Escherichia coli of the gene, and characteristics of the enzyme | Q32178245 | ||
| Mechanistic aspects and redox properties of hyperthermophilic L-proline dehydrogenase from Pyrococcus furiosus related to dimethylglycine dehydrogenase/oxidase | Q33279351 | ||
| Cold shock of a hyperthermophilic archaeon: Pyrococcus furiosus exhibits multiple responses to a suboptimal growth temperature with a key role for membrane-bound glycoproteins. | Q33553697 | ||
| Purification and characterization of a membrane-bound hydrogenase from the hyperthermophilic archaeon Pyrococcus furiosus. | Q33602528 | ||
| Macromolecular compartmentation and channeling. | Q33769793 | ||
| Systematic and large-scale two-hybrid screens | Q33941538 | ||
| Purification and molecular characterization of the tungsten-containing formaldehyde ferredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus: the third of a putative five-member tungstoenzyme family | Q33991255 | ||
| Phosphoenolpyruvate synthetase from the hyperthermophilic archaeon Pyrococcus furiosus | Q33995385 | ||
| Complexes of sequential metabolic enzymes | Q34039557 | ||
| Defining genes in the genome of the hyperthermophilic archaeon Pyrococcus furiosus: implications for all microbial genomes | Q34109993 | ||
| Protein interactions: two methods for assessment of the reliability of high throughput observations | Q34138835 | ||
| Macromolecular assemblies: greater than their parts. | Q34141543 | ||
| Glyceraldehyde-3-phosphate ferredoxin oxidoreductase, a novel tungsten-containing enzyme with a potential glycolytic role in the hyperthermophilic archaeon Pyrococcus furiosus | Q34308852 | ||
| Indolepyruvate ferredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus. A new enzyme involved in peptide fermentation | Q34342737 | ||
| Roundup: a multi-genome repository of orthologs and evolutionary distances | Q34538669 | ||
| The impact of extremophiles on structural genomics (and vice versa). | Q34636738 | ||
| The novel tungsten-iron-sulfur protein of the hyperthermophilic archaebacterium, Pyrococcus furiosus, is an aldehyde ferredoxin oxidoreductase. Evidence for its participation in a unique glycolytic pathway | Q34900646 | ||
| Impact of genome-wide functional analyses on cell biology research | Q35041077 | ||
| Affinity purification-mass spectrometry. Powerful tools for the characterization of protein complexes | Q35064409 | ||
| Whole-genome DNA microarray analysis of a hyperthermophile and an archaeon: Pyrococcus furiosus grown on carbohydrates or peptides. | Q35098735 | ||
| Evaluation of two-dimensional gel electrophoresis-based proteome analysis technology | Q35205810 | ||
| Operon prediction in Pyrococcus furiosus | Q35567971 | ||
| Purification and characterization of two reversible and ADP-dependent acetyl coenzyme A synthetases from the hyperthermophilic archaeon Pyrococcus furiosus | Q35614232 | ||
| Characterization of the reverse gyrase from the hyperthermophilic archaeon Pyrococcus furiosus | Q35620712 | ||
| On the origin of intracellular compartmentation and organized metabolic systems | Q35672353 | ||
| Co-immunoprecipitation from transfected cells | Q35738291 | ||
| Ribonucleotide reductase in the archaeon Pyrococcus furiosus: a critical enzyme in the evolution of DNA genomes? | Q35952509 | ||
| Sulfide dehydrogenase from the hyperthermophilic archaeon Pyrococcus furiosus: a new multifunctional enzyme involved in the reduction of elemental sulfur | Q35979789 | ||
| New methodologies for measuring protein interactions in vivo and in vitro | Q36046401 | ||
| Mechanisms of iron-sulfur cluster assembly: the SUF machinery | Q36279919 | ||
| Ribosomal proteins in the spotlight | Q36300781 | ||
| Structural biology of cellular machines | Q36387292 | ||
| Detection and analysis of protein-protein interactions in organellar and prokaryotic proteomes by native gel electrophoresis: (Membrane) protein complexes and supercomplexes | Q36525893 | ||
| Affinity chromatography: a useful tool in proteomics studies | Q36656966 | ||
| The carbamate kinase-like carbamoyl phosphate synthetase of the hyperthermophilic archaeon Pyrococcus furiosus, a missing link in the evolution of carbamoyl phosphate biosynthesis | Q36709497 | ||
| Identification of membrane proteins in the hyperthermophilic archaeon pyrococcus furiosus using proteomics and prediction programs | Q36750495 | ||
| Cellulosomes: microbial nanomachines that display plasticity in quaternary structure | Q36762567 | ||
| Methods for the detection and analysis of protein-protein interactions | Q36886214 | ||
| Rubrerythrin from the hyperthermophilic archaeon Pyrococcus furiosus is a rubredoxin-dependent, iron-containing peroxidase | Q37622988 | ||
| Functional interactions of a homolog of proliferating cell nuclear antigen with DNA polymerases in Archaea. | Q39497664 | ||
| Biochemical analysis of replication factor C from the hyperthermophilic archaeon Pyrococcus furiosus | Q39503422 | ||
| Characterization of hydrogenase II from the hyperthermophilic archaeon Pyrococcus furiosus and assessment of its role in sulfur reduction. | Q39538563 | ||
| A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters | Q39584601 | ||
| Molecular and phylogenetic characterization of pyruvate and 2-ketoisovalerate ferredoxin oxidoreductases from Pyrococcus furiosus and pyruvate ferredoxin oxidoreductase from Thermotoga maritima | Q39839786 | ||
| A novel and remarkably thermostable ferredoxin from the hyperthermophilic archaebacterium Pyrococcus furiosus. | Q39949324 | ||
| New experimental approaches for investigating interactions between Pyrococcus furiosus carbamate kinase and carbamoyltransferases, enzymes involved in the channeling of thermolabile carbamoyl phosphate | Q42120336 | ||
| Genetic, enzymatic, and structural analyses of phenylalanyl-tRNA synthetase from Thermococcus kodakaraensis KOD1. | Q42612856 | ||
| The complex between hydrogenase-maturation proteins HypC and HypD is an intermediate in the supply of cyanide to the active site iron of [NiFe]-hydrogenases | Q42699401 | ||
| Operon prediction for sequenced bacterial genomes without experimental information | Q42940094 | ||
| Differential and dynamic localization of topoisomerases in Bacillus subtilis | Q42941386 | ||
| Functional analysis of the small subunit of the putative homoaconitase from Pyrococcus horikoshii in the Thermus lysine biosynthetic pathway | Q43015289 | ||
| Protein complexes in the archaeon Methanothermobacter thermautotrophicus analyzed by blue native/SDS-PAGE and mass spectrometry | Q43017873 | ||
| Citrate synthase from the hyperthermophilic Archaeon, Pyrococcus furiosus | Q43023642 | ||
| Comparison of isocitrate dehydrogenase from three hyperthermophiles reveals differences in thermostability, cofactor specificity, oligomeric state, and phylogenetic affiliation | Q43726529 | ||
| P4510 | describes a project that uses | SQL | Q47607 |
| P433 | issue | 4 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Pyrococcus furiosus | Q146310 |
| P304 | page(s) | 735-751 | |
| P577 | publication date | 2008-11-28 | |
| P1433 | published in | Molecular & Cellular Proteomics | Q6895932 |
| P1476 | title | Novel multiprotein complexes identified in the hyperthermophilic archaeon Pyrococcus furiosus by non-denaturing fractionation of the native proteome | |
| P478 | volume | 8 |
| Q33831105 | A computational framework for proteome-wide pursuit and prediction of metalloproteins using ICP-MS and MS/MS data |
| Q27677216 | An Archaeal Homolog of Proteasome Assembly Factor Functions as a Proteasome Activator |
| Q41875926 | Characterization of ten heterotetrameric NDP-dependent acyl-CoA synthetases of the hyperthermophilic archaeon Pyrococcus furiosus |
| Q36337685 | DNA targeting by the type I-G and type I-A CRISPR-Cas systems of Pyrococcus furiosus. |
| Q90150481 | Evidence for binary Smc complexes lacking kite subunits in archaea |
| Q39612589 | Genome sequencing of a genetically tractable Pyrococcus furiosus strain reveals a highly dynamic genome |
| Q54250858 | Improving monoterpene geraniol production through geranyl diphosphate synthesis regulation in Saccharomyces cerevisiae. |
| Q37795588 | Iron-sulfur world in aerobic and hyperthermoacidophilic archaea Sulfolobus |
| Q54382380 | Microbial metalloproteomes are largely uncharacterized. |
| Q51005522 | Mitochondrial engineering of the TCA cycle for fumarate production. |
| Q37832278 | Model organisms for genetics in the domain Archaea: methanogens, halophiles, Thermococcales and Sulfolobales |
| Q34061238 | Native capillary isoelectric focusing for the separation of protein complex isoforms and subcomplexes |
| Q43675770 | Physical interactions between tricarboxylic acid cycle enzymes in Bacillus subtilis: evidence for a metabolon. |
| Q29140766 | Quantitative Tagless Copurification: A Method to Validate and Identify Protein-Protein Interactions |
| Q42623891 | Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638. |
| Q36049234 | Recombinant expression library of Pyrococcus furiosus constructed by high-throughput cloning: a useful tool for functional and structural genomics |
| Q89454827 | Supramolecular tholos-like architecture constituted by archaeal proteins without functional annotation |
| Q48124225 | SurR is a master regulator of the primary electron flow pathways in the order Thermococcales. |
| Q33601462 | Target DNA recognition and cleavage by a reconstituted Type I-G CRISPR-Cas immune effector complex. |
| Q35621447 | Three CRISPR-Cas immune effector complexes coexist in Pyrococcus furiosus. |
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