| review article | Q7318358 |
| scholarly article | Q13442814 |
| P50 | author | Shuangchun Yan | Q57465074 |
| P2093 | author name string | Boris A Vinatzer | |
| P2860 | cites work | The COG database: an updated version includes eukaryotes | Q21284294 |
| Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome Sequence | Q22065447 | ||
| Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris | Q22065748 | ||
| Phylogenomic inference of protein molecular function: advances and challenges | Q22066096 | ||
| Comparison of the genomes of two Xanthomonas pathogens with differing host specificities | Q22122346 | ||
| Genome sequence of the plant pathogen Ralstonia solanacearum | Q22122347 | ||
| The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis | Q22122395 | ||
| Genomewide identification of proteins secreted by the Hrp type III protein secretion system of Pseudomonas syringae pv. tomato DC3000 | Q24530644 | ||
| PUMA2--grid-based high-throughput analysis of genomes and metabolic pathways | Q24538614 | ||
| Genome sequencing in microfabricated high-density picolitre reactors | Q24544260 | ||
| Gapped BLAST and PSI-BLAST: a new generation of protein database search programs | Q24545170 | ||
| Microbial gene identification using interpolated Markov models | Q24546204 | ||
| MEME: discovering and analyzing DNA and protein sequence motifs | Q24680110 | ||
| TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes | Q24683561 | ||
| Database resources of the National Center for Biotechnology Information | Q24683601 | ||
| Versatile and open software for comparing large genomes | Q24807126 | ||
| ASAP: a resource for annotating, curating, comparing, and disseminating genomic data | Q25255524 | ||
| Pfam: clans, web tools and services | Q25257103 | ||
| The integrated microbial genomes (IMG) system | Q25257667 | ||
| Profile hidden Markov models | Q27860536 | ||
| Serial analysis of gene expression | Q27860777 | ||
| OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes | Q27860860 | ||
| Artemis: sequence visualization and annotation | Q27861024 | ||
| PAML: a program package for phylogenetic analysis by maximum likelihood | Q27861096 | ||
| Taverna: a tool for building and running workflows of services | Q28252371 | ||
| Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis | Q28266110 | ||
| Protein delivery into eukaryotic cells by type III secretion machines | Q28276443 | ||
| Specific binding of the Xanthomonas campestris pv. vesicatoria AraC-type transcriptional activator HrpX to plant-inducible promoter boxes | Q29346553 | ||
| Identification of novel hrp-regulated genes through functional genomic analysis of the Pseudomonas syringae pv. tomato DC3000 genome | Q29346742 | ||
| Mauve: multiple alignment of conserved genomic sequence with rearrangements | Q29547292 | ||
| Creating the gene ontology resource: design and implementation | Q29614366 | ||
| Comprehensive transposon mutant library of Pseudomonas aeruginosa | Q29614861 | ||
| ACT: the Artemis Comparison Tool | Q29616601 | ||
| Genomic approaches in Xanthomonas campestris pv. vesicatoria allow fishing for virulence genes | Q30320538 | ||
| Viewing and annotating sequence data with Artemis | Q30809868 | ||
| CBS Genome Atlas Database: a dynamic storage for bioinformatic results and sequence data | Q30944566 | ||
| Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction | Q31172578 | ||
| The cloned avirulence gene avrPto induces disease resistance in tomato cultivars containing the Pto resistance gene | Q33206962 | ||
| Integrated regulation of the type III secretion system and other virulence determinants in Ralstonia solanacearum | Q33255330 | ||
| Exploitation of eukaryotic ubiquitin signaling pathways by effectors translocated by bacterial type III and type IV secretion systems | Q33270514 | ||
| Expressed sequence tags from phytophthora sojae reveal genes specific to development and infection | Q33289316 | ||
| The MicrobesOnline Web site for comparative genomics | Q33891885 | ||
| Gene expression analysis of plant host-pathogen interactions by SuperSAGE | Q33974590 | ||
| Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factor | Q34013057 | ||
| Type III secretion system effector proteins: double agents in bacterial disease and plant defense | Q34337243 | ||
| Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning | Q34430712 | ||
| Type III effector AvrPtoB requires intrinsic E3 ubiquitin ligase activity to suppress plant cell death and immunity. | Q34479457 | ||
| Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli | Q34532363 | ||
| Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands | Q34546996 | ||
| Of what use is sex to bacteria? | Q34562948 | ||
| Ralstonia solanacearum requires F-box-like domain-containing type III effectors to promote disease on several host plants | Q34566984 | ||
| Whole-genome re-sequencing | Q34571951 | ||
| Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A. | Q34577655 | ||
| The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation | Q35545845 | ||
| The role and regulation of programmed cell death in plant-pathogen interactions. | Q35649325 | ||
| Genomic islands in pathogenic and environmental microorganisms | Q35752419 | ||
| Databases and software for the comparison of prokaryotic genomes | Q36185042 | ||
| Comparative genomics reveals what makes an enterobacterial plant pathogen | Q36480519 | ||
| Evolution of plant pathogenicity in Streptomyces | Q36486071 | ||
| Subterfuge and manipulation: type III effector proteins of phytopathogenic bacteria | Q36497116 | ||
| Multilocus sequence typing of bacteria | Q36506797 | ||
| Closing the circle on the discovery of genes encoding Hrp regulon members and type III secretion system effectors in the genomes of three model Pseudomonas syringae strains | Q36638315 | ||
| Comparative genomics and the evolution of prokaryotes. | Q36731724 | ||
| Genetic and epigenetic dissection of cis regulatory variation | Q36735903 | ||
| Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors. | Q37285616 | ||
| Pathogenicity and other genomic islands in plant pathogenic bacteria | Q37766936 | ||
| Whole-genome expression profiling defines the HrpL regulon of Pseudomonas syringae pv. tomato DC3000, allows de novo reconstruction of the Hrp cis clement, and identifies novel coregulated genes | Q38308046 | ||
| Genome-wide gene expression analysis of Pseudomonas syringae pv. tomato DC3000 reveals overlapping and distinct pathways regulated by hrpL and hrpRS. | Q38310180 | ||
| Genome-wide analysis of gene expression in Ralstonia solanacearum reveals that the hrpB gene acts as a regulatory switch controlling multiple virulence pathways. | Q38320943 | ||
| Genetic characterization of Pseudomonas fluorescens SBW25 rsp gene expression in the phytosphere and in vitro | Q40703315 | ||
| Characterization of the cis-acting regulatory element controlling HrpB-mediated activation of the type III secretion system and effector genes in Ralstonia solanacearum. | Q40867634 | ||
| Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. | Q42502427 | ||
| A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae. | Q42671228 | ||
| Functional analysis of the type III effectors AvrRpt2 and AvrRpm1 of Pseudomonas syringae with the use of a single-copy genomic integration system | Q44135247 | ||
| Identification of Pseudomonas syringae pv. tomato genes induced during infection of Arabidopsis thaliana. | Q44463240 | ||
| IslandPath: aiding detection of genomic islands in prokaryotes. | Q48615472 | ||
| A probabilistic method for identifying start codons in bacterial genomes. | Q52049906 | ||
| Gene expression profiles of Blumeria graminis indicate dynamic changes to primary metabolism during development of an obligate biotrophic pathogen. | Q53671239 | ||
| The Comprehensive Microbial Resource. | Q55113853 | ||
| WebACT--an online companion for the Artemis Comparison Tool | Q57518126 | ||
| Article withdrawn: GNARE: a grid-based server for the analysis of user submitted genomes | Q80384790 | ||
| P433 | issue | 1 | |
| P304 | page(s) | 105-118 | |
| P577 | publication date | 2008-01-01 | |
| P1433 | published in | Molecular Plant Pathology | Q11937220 |
| P1476 | title | Mining the genomes of plant pathogenic bacteria: how not to drown in gigabases of sequence | |
| P478 | volume | 9 |
| Q37514656 | Lifestyles of the effector rich: genome-enabled characterization of bacterial plant pathogens | cites work | P2860 |
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