Chromatin marks identify critical cell types for fine mapping complex trait variants

scientific article published on 23 December 2012

Chromatin marks identify critical cell types for fine mapping complex trait variants is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1033269562
P356DOI10.1038/NG.2504
P2888exact matchhttps://scigraph.springernature.com/pub.10.1038/ng.2504
P932PMC publication ID3826950
P698PubMed publication ID23263488
P5875ResearchGate publication ID233976574

P50authorBarbara E. StrangerQ30347493
Gosia TrynkaQ30501374
Buhm HanQ88645519
P2093author name stringX Shirley Liu
Han Xu
Cynthia Sandor
Soumya Raychaudhuri
P2860cites workA user's guide to the encyclopedia of DNA elements (ENCODE)Q21092716
Model-based analysis of ChIP-Seq (MACS)Q21183902
Trait-associated SNPs are more likely to be eQTLs: annotation to enhance discovery from GWASQ21563317
Potential etiologic and functional implications of genome-wide association loci for human diseases and traitsQ22066284
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysisQ24609915
A map of human genome variation from population-scale sequencingQ24617794
Biological, clinical and population relevance of 95 loci for blood lipidsQ24622541
Platelets amplify inflammation in arthritis via collagen-dependent microparticle productionQ24627618
Histone H3K27ac separates active from poised enhancers and predicts developmental stateQ24628758
Hundreds of variants clustered in genomic loci and biological pathways affect human heightQ24630979
From noncoding variant to phenotype via SORT1 at the 1p13 cholesterol locusQ24633183
Combinatorial patterns of histone acetylations and methylations in the human genomeQ24647290
High-resolution profiling of histone methylations in the human genomeQ27860906
Chromatin modifications and their functionQ27861067
Molecular genetics of the LDL receptor gene in familial hypercholesterolemiaQ28207758
Genome-wide association study identifies five new schizophrenia lociQ28248384
High-resolution mapping and characterization of open chromatin across the genomeQ28266995
New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes riskQ28270700
Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetesQ28272915
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lociQ28281906
A genome-wide association study identifies susceptibility variants for type 2 diabetes in Han ChineseQ28943551
Stratifying type 2 diabetes cases by BMI identifies genetic risk variants in LAMA1 and enrichment for risk variants in lean compared to obese casesQ29417103
Genome-wide association study in individuals of South Asian ancestry identifies six new type 2 diabetes susceptibility lociQ29417126
Meta-analysis of genome-wide association studies identifies eight new loci for type 2 diabetes in east AsiansQ29417142
Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4Q29417143
Mapping and analysis of chromatin state dynamics in nine human cell typesQ29547552
Genomic maps and comparative analysis of histone modifications in human and mouseQ29614418
HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variantsQ29614906
Evolving concepts of rheumatoid arthritisQ29618020
The NIH Roadmap Epigenomics Mapping ConsortiumQ29619856
High-density genetic mapping identifies new susceptibility loci for rheumatoid arthritisQ30419111
Large-scale gene-centric meta-analysis across 39 studies identifies type 2 diabetes lociQ30425020
The functional neuroanatomy of bipolar disorder: a review of neuroimaging findingsQ33206291
Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associationsQ33549716
Identification of new genetic risk variants for type 2 diabetesQ33700532
Genetic variants at 2q24 are associated with susceptibility to type 2 diabetesQ33904459
Trans-eQTLs reveal that independent genetic variants associated with a complex phenotype converge on intermediate genes, with a major role for the HLAQ33987569
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identityQ34027627
Global mapping of cell type-specific open chromatin by FAIRE-seq reveals the regulatory role of the NFI family in adipocyte differentiationQ34058172
Mast cells: a cellular link between autoantibodies and inflammatory arthritisQ34148153
Genetics of gene expression in primary immune cells identifies cell type-specific master regulators and roles of HLA allelesQ34263565
Association of a functional variant downstream of TNFAIP3 with systemic lupus erythematosusQ35012624
Dynamics of insulin secretion and the clinical implications for obesity and diabetesQ35015726
H3K4 tri-methylation provides an epigenetic signature of active enhancersQ35422275
Homeostatic maintenance of natural Foxp3(+) CD25(+) CD4(+) regulatory T cells by interleukin (IL)-2 and induction of autoimmune disease by IL-2 neutralizationQ36402763
DNase I sensitivity QTLs are a major determinant of human expression variationQ36408973
The dynamic co-evolution of memory and regulatory CD4+ T cells in the peripheryQ36743559
Parental origin of sequence variants associated with complex diseasesQ37102209
Functional enhancers at the gene-poor 8q24 cancer-linked locus.Q37279616
Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's diseaseQ37318174
The Plasma Lipoproteins: Structure and MetabolismQ37802822
Enhancers: mechanisms of action and cell specificityQ39293275
Common polymorphic transcript variation in human diseaseQ40005558
Functional and anatomical aspects of prefrontal pathology in schizophreniaQ41609625
Cortical abnormalities in schizophrenia identified by structural magnetic resonance imagingQ48192520
A genome-wide association study in the Japanese population identifies susceptibility loci for type 2 diabetes at UBE2E2 and C2CD4A-C2CD4BQ57249678
P433issue2
P407language of work or nameEnglishQ1860
P921main subjectcomplex traitQ55608248
P304page(s)124-130
P577publication date2012-12-23
P1433published inNature GeneticsQ976454
P1476titleChromatin marks identify critical cell types for fine mapping complex trait variants
P478volume45

Reverse relations

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