Random-clone strategy for genomic restriction mapping in yeast

scientific article published on October 1986

Random-clone strategy for genomic restriction mapping in yeast is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode1986PNAS...83.7826O
P356DOI10.1073/PNAS.83.20.7826
P932PMC publication ID386815
P698PubMed publication ID3463999
P5875ResearchGate publication ID19692338

P2093author name stringM V Olson
M Frank
G M Brodeur
M MacCollin
C Helms
T Frank
M Y Graham
J E Dutchik
R Scheinman
P2860cites workPositive regulation in the general amino acid control of Saccharomyces cerevisiaeQ27939411
High-frequency transformation of yeast: autonomous replication of hybrid DNA moleculesQ29614232
Genealogy of principal strains of the yeast genetic stock centerQ33951962
Chromosomal walking and jumping to isolate DNA from the Ace and rosy loci and the bithorax complex in Drosophila melanogasterQ34055658
Computer-based image analysis of one-dimensional electrophoretic gels used for the separation of DNA restriction fragmentsQ35535012
Novel bacteriophage lambda cloning vectorQ36405331
Isolation and Characterization of the Centromere from Chromosome V (CEN5) of Saccharomyces cerevisiaeQ36940468
Genetic map of Saccharomyces cerevisiae, edition 9Q37061797
Toward a physical map of the genome of the nematode Caenorhabditis elegansQ37403621
Evidence for translational regulation of the activator of general amino acid control in yeastQ37573526
An electrophoretic karyotype for yeastQ37690127
Determination of the nuclear DNA content of Saccharomyces cerevisiae and implications for the organization of DNA in yeast chromosomesQ40821446
A bacteriophage lambda vector for cloning large DNA fragments made with several restriction enzymesQ45110971
Gene organization and recombinational hotspots in the murine major histocompatibility complexQ48367059
Structure and function of the yeast URA3 gene: expression in Escherichia coli.Q48389478
The molecular characterization of three transcriptional mutations in the yeast iso-2-cytochrome c geneQ48403904
A new method for purifying lambda DNA from phage lysatesQ70078904
Construction of coliphage lambda Charon vectors with BamHI cloning sitesQ72898599
Relationships between the physical and genetic maps of a 470 × 103 base-pair region around the terminus of Escherichia coli K12 DNA replicationQ72930232
P433issue20
P407language of work or nameEnglishQ1860
P304page(s)7826-7830
P577publication date1986-10-01
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleRandom-clone strategy for genomic restriction mapping in yeast
P478volume83

Reverse relations

cites work (P2860)
Q35024253A 12-Mb complete coverage BAC contig map in human chromosome 16p13.1-p11.2.
Q35783689A 368-base-pair cis-acting HWP1 promoter region, HCR, of Candida albicans confers hypha-specific gene regulation and binds architectural transcription factors Nhp6 and Gcf1p
Q37683319A Behind-the-Scenes Story of Precision Medicine
Q94048566A Yeast Artificial Chromosome Library Database: Design Considerations
Q36757666A first-generation physical map of the human genome
Q37373645A mutant nuclear protein with similarity to RNA binding proteins interferes with nuclear import in yeast
Q35798786A physical map of the Myxococcus xanthus chromosome
Q22122382A physical map of the human genome
Q34144754A physical map of the mouse genome
Q40678639A presumptive helicase (MOT1 gene product) affects gene expression and is required for viability in the yeast Saccharomyces cerevisiae
Q33262817A second generation radiation hybrid map to aid the assembly of the bovine genome sequence
Q35858419A simple and efficient method for constructing high resolution physical maps
Q35617502A stationary-phase gene in Saccharomyces cerevisiae is a member of a novel, highly conserved gene family.
Q33527625A test case for physical mapping of human genome by repetitive sequence fingerprints: construction of a physical map of a 420 kb YAC subcloned into cosmids
Q21284231Algebraic correction methods for computational assessment of clone overlaps in DNA fingerprint mapping
Q26786228An Ancient Yeast for Young Geneticists: A Primer on the Schizosaccharomyces pombe Model System
Q33179442An algorithm for the assembly of robust physical maps based on a combination of multi-level hybridization data and fingerprinting data
Q36391257An ordered collection of Bacillus subtilis DNA segments cloned in yeast artificial chromosomes
Q34613090Bacterial artificial chromosome-based physical map of the rice genome constructed by restriction fingerprint analysis
Q34480598Basic principles of yeast genomics, a personal recollection
Q27934162Bdf1, a yeast chromosomal protein required for sporulation
Q33963980CHL12, a gene essential for the fidelity of chromosome transmission in the yeast Saccharomyces cerevisiae
Q58487825Chapter 15 Halobacterial genes and genomes
Q33291536Characterization of bacteriophage P1 library containing inserts of Drosophila DNA of 75?100 kilobase pairs
Q35823282Characterization of the PNT1 pentamidine resistance gene of Saccharomyces cerevisiae
Q36234068Chromosome condensation and sister chromatid pairing in budding yeast
Q59090650Clone by clone by clone
Q59009886Clone maps made simple
Q34309840Cloning and disruption of CKB1, the gene encoding the 38-kDa beta subunit of Saccharomyces cerevisiae casein kinase II (CKII). Deletion of CKII regulatory subunits elicits a salt-sensitive phenotype.
Q48070063Cloning and expression of an Aspergillus kawachii endo-1,4-beta-xylanase gene in Saccharomyces cerevisiae
Q48041491Cloning and sequencing of complement component C9 and its linkage to DOC-2 in the pufferfish Fugu rubripes
Q41082198Cloning of a yeast U1 snRNP 70K protein homologue: functional conservation of an RNA-binding domain between humans and yeast
Q36359479Cloning of the STE5 gene of Saccharomyces cerevisiae as a suppressor of the mating defect of cdc25 temperature-sensitive mutants
Q27934164Cofilin is an essential component of the yeast cortical cytoskeleton
Q44099549Comparative genomic analysis of sequences sampled from a small region on soybean (Glycine max) molecular linkage group G.
Q35844936Comparative physical mapping between Oryza sativa (AA genome type) and O. punctata (BB genome type).
Q40452246Completion of the detailed restriction map of the E. coli genome by the isolation of overlapping cosmid clones.
Q40448546Construction of a Not I restriction map of the fission yeast Schizosaccharomyces pombe genome
Q36710326Construction of a cosmid contig and of an EcoRI restriction map of yeast chromosome X.
Q36174672Construction of an ordered cosmid collection of the Escherichia coli K-12 W3110 chromosome
Q33530293Construction, arraying, and high-density screening of large insert libraries of human chromosomes X and 21: their potential use as reference libraries
Q40414526Contigs built with fingerprints, markers, and FPC V4.7.
Q33191456Continuum of overlapping clones spanning the entire human chromosome 21q.
Q35873991Cosmid-derived map of E. coli strain BHB2600 in comparison to the map of strain W3110
Q34319641DNA fingerprinting by sampled sequencing
Q33269549Detection and characterization of chimeric yeast artificial-chromosome clones
Q35933314Differentially regulated malate synthase genes participate in carbon and nitrogen metabolism of S. cerevisiae
Q67754436Distribution of moderately repetitive sequences pTR5 and LF1 in Xq24–q28 human DNA and their use in assembling YAC contigs
Q36648340Dosage-dependent modulation of glucose repression by MSN3 (STD1) in Saccharomyces cerevisiae.
Q33291537Drosophila genome project: One-hit coverage in yeast artificial chromosomes
Q27931116EGT2 gene transcription is induced predominantly by Swi5 in early G1.
Q27938782ENP1, an essential gene encoding a nuclear protein that is highly conserved from yeast to humans
Q57839411Efficacy of clone fingerprinting methodologies
Q33857583Enhanced meiotic recombination on the smallest chromosome of Saccharomyces cerevisiae
Q40553978Enhanced recovery and restriction mapping of DNA fragments cloned in a new lambda vector
Q27936790Evidence that the SKI antiviral system of Saccharomyces cerevisiae acts by blocking expression of viral mRNA.
Q27931215Extragenic suppressors of mutations in the cytoplasmic C terminus of SEC63 define five genes in Saccharomyces cerevisiae
Q33205414Fosmid-based physical mapping of the Histoplasma capsulatum genome
Q36736572GRR1 of Saccharomyces cerevisiae is required for glucose repression and encodes a protein with leucine-rich repeats
Q54386833Generation of an ilv bradytrophic phenocopy in yeast by antisense RNA.
Q27936464Genetic and biochemical characterization of a phosphatidylinositol-specific phospholipase C in Saccharomyces cerevisiae
Q32063801Genome encyclopedias and their use for comparative analysis of Rhodobacter capsulatus strains
Q40413160Genome mapping by fluorescent fingerprinting
Q36063147Genome mapping by nonrandom anchoring: a discrete theoretical analysis
Q24803287Genome physical mapping from large-insert clones by fingerprint analysis with capillary electrophoresis: a robust physical map of Penicillium chrysogenum
Q30842552Genome physical mapping with large-insert bacterial clones by fingerprint analysis: methodologies, source clone genome coverage, and contig map quality
Q35598325Genome structure and evolution in Drosophila: applications of the framework P1 map
Q34684004Genomic mapping by anchoring random clones: A mathematical analysis
Q33193214Genomic mapping by single copy landmark detection: a predictive model with a discrete mathematical approach
Q46956463Genomic sequence sampling: a strategy for high resolution sequence-based physical mapping of complex genomes
Q40741866Genomics - the new rock and roll?
Q24635329Happy mapping: a proposal for linkage mapping the human genome
Q35020819High throughput fingerprint analysis of large-insert clones
Q31152991High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis
Q34403036Human Xq24-Xq28: approaches to mapping with yeast artificial chromosomes
Q36473258Human chromosome-specific repetitive DNA sequences: novel markers for genetic analysis
Q32063797Hybridization mapping of Trypanosoma cruzi chromosomes III and IV.
Q41517066Identification and characterization of yeast mutants and the gene for a cruciform cutting endonuclease
Q27935756Identification and cloning of the CHL4 gene controlling chromosome segregation in yeast.
Q36760585Identification of a large family of genes for putative chemoreceptor proteins in an ordered library of the Desulfovibrio vulgaris Hildenborough genome
Q33989817Improved genetic selection for screening bacteriophage libraries by homologous recombination in vivo
Q21045365Initial sequencing and analysis of the human genome
Q27937476Interactions between gene products involved in divalent cation transport in Saccharomyces cerevisiae.
Q30727736Internet Contig Explorer (iCE)--a tool for visualizing clone fingerprint maps
Q33731890Isolation of single-copy-sequence clones from a yeast artificial chromosome library of randomly-sheared Arabidopsis thaliana DNA.
Q33965012KRB1, a suppressor of mak7-1 (a mutant RPL4A), is RPL4B, a second ribosomal protein L4 gene, on a fragment of Saccharomyces chromosome XII
Q27934355LAS1 is an essential nuclear protein involved in cell morphogenesis and cell surface growth
Q21284342LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes
Q36984255Large-insert genome analysis technology detects structural variation in Pseudomonas aeruginosa clinical strains from cystic fibrosis patients.
Q33959884MAK10, a glucose-repressible gene necessary for replication of a dsRNA virus of Saccharomyces cerevisiae, has T cell receptor alpha-subunit motifs
Q33968518Macrorestriction analysis of Caenorhabditis elegans genomic DNA.
Q35842154Mapping and sequencing complex genomes: let's get physical!
Q31139058Mapping by Sequencing the Pneumocystis Genome Using the Ordering DNA Sequences V3 Tool
Q59040281Mapping the genome one molecule at a time — optical mapping
Q54767438Mapping using gene encyclopaedias.
Q38513639Meiotic chromosome condensation and pairing in Saccharomyces cerevisiae studied by chromosome painting
Q33927099Meiotic recombination between yeast artificial chromosomes yields a single clone containing the entire BCL2 protooncogene
Q34451728Microtubule stability in budding yeast: characterization and dosage suppression of a benomyl-dependent tubulin mutant
Q42815029Minipodia, novel structures for extension of the lamella: a high-spatial-resolution video microscopic study
Q33961527Molecular and genetic analysis of the SNF7 gene in Saccharomyces cerevisiae
Q27935275Molecular characterization of the yeast meiotic regulatory gene RIM1.
Q69559689Molecular cloning of chromosome I DNA from Saccharomyces cerevisiae: localization of a repeated sequence containing an acid phosphatase gene near a telomere of chromosome I and chromosome VIII
Q41515501Molecular complementation of a collagen mutation in mammalian cells using yeast artificial chromosomes
Q40554108Mono- through hexanucleotide composition of the sense strand of yeast DNA: a Markov chain analysis
Q46012712Multicolor fluorescence in situ hybridization and pulsed field electrophoresis dissect CMT1B gene region
Q35195336Multicolor in situ hybridization and linkage analysis order Charcot-Marie-Tooth type I (CMTIA) gene-region markers
Q36769605Multiple-complete-digest restriction fragment mapping: generating sequence-ready maps for large-scale DNA sequencing
Q30798681Nested chromosomal fragmentation in yeast using the meganuclease I-Sce I: a new method for physical mapping of eukaryotic genomes
Q30657331ODS2: a multiplatform software application for creating integrated physical and genetic maps
Q33966555On the consistency of a physical mapping method to reconstruct a chromosome in vitro.
Q36359094On the directional specificity of ribosome frameshifting at a "hungry" codon
Q41334277Optical mapping approaches to molecular genomics
Q72345878Optical mapping of lambda bacteriophage clones using restriction endonucleases
Q37592896Optimized strategies for sequence-tagged-site selection in genome mapping
Q32115833Ordered cloned DNA map of the genome of Vibrio cholerae 569B and localization of genetic markers
Q33907454Ordering of cosmid clones covering the herpes simplex virus type I (HSV-I) genome: a test case for fingerprinting by hybridisation
Q27935467Overexpression of SIS2, which contains an extremely acidic region, increases the expression of SWI4, CLN1 and CLN2 in sit4 mutants.
Q34181807PAK1, a gene that can regulate p53 activity in yeast
Q93595687PRODUCT NEWS
Q41359172Phosphatidylserine decarboxylase 2 of Saccharomyces cerevisiáe. Cloning and mapping of the gene, heterologous expression, and creation of the null allele
Q33957714Physical map of the Saccharomyces cerevisiae genome at 110-kilobase resolution
Q39837178Physical mapping of bacterial genomes
Q32060220Physical mapping of chromosomes VII and XV of Saccharomyces cerevisiae at 3.5 kb average resolution to allow their complete sequencing
Q34286693Physical mapping of complex genomes by cosmid multiplex analysis
Q33743681Physical mapping of human chromosomes by repetitive sequence fingerprinting
Q34319756Physical mapping of the Myxococcus xanthus genome by random cloning in yeast artificial chromosomes
Q29618575Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae at a resolution of 2.6 kilobase pairs
Q33780853Pooled genomic indexing of rhesus macaque
Q33966461Potential RNA binding proteins in Saccharomyces cerevisiae identified as suppressors of temperature-sensitive mutations in NPL3
Q24563795Primary structure and function of a second essential member of the heterooligomeric TCP1 chaperonin complex of yeast, TCP1 beta
Q50317989Probabilistic Analysis of Random Clone Restriction Mapping
Q36695907Promoter elements determining weak expression of the GAL4 regulatory gene of Saccharomyces cerevisiae
Q27937540Proteins connecting the nuclear pore complex with the nuclear interior
Q30908230Purification, characterization, cDNA cloning and expression of a novel ketoreductase from Zygosaccharomyces rouxii
Q40957100Quality not quantity: the pufferfish genome
Q34595912Random-breakage mapping method applied to human DNA sequences
Q40518961Random-breakage mapping, a rapid method for physically locating an internal sequence with respect to the ends of a DNA molecule
Q36324172Randomly picked cosmid clones overlap the pyrB and oriC gap in the physical map of the E. coli chromosome
Q40959190Repetitive sequence fingerprinting in the long range mapping of mammalian genomes
Q27933911Requirement of the self-glucosylating initiator proteins Glg1p and Glg2p for glycogen accumulation in Saccharomyces cerevisiae
Q32064784Screening for overlapping bacterial artificial chromosome clones by PCR analysis with an arbitrary primer
Q27930995Sequence and chromosomal localization of two PET genes required for cytochrome c oxidase assembly in Saccharomyces cerevisiae
Q35021711Software for automated analysis of DNA fingerprinting gels.
Q27930248Spermidine biosynthesis in Saccharomyces cerevisae: polyamine requirement of a null mutant of the SPE3 gene (spermidine synthase).
Q33480226Statistical analysis of DNA fingerprint data for ordered clone physical mapping of human chromosomes
Q34325311Strategies for the systematic sequencing of complex genomes
Q33959797Substrate targeting of the yeast cyclin-dependent kinase Pho85p by the cyclin Pcl10p
Q33968839Synergy between trehalose and Hsp104 for thermotolerance in Saccharomyces cerevisiae
Q27929876Synthesis of monohydroxylated inositolphosphorylceramide (IPC-C) in Saccharomyces cerevisiae requires Scs7p, a protein with both a cytochrome b5-like domain and a hydroxylase/desaturase domain
Q54594542Systematic mapping of autonomously replicating sequences on chromosome V of Saccharomyces cerevisiae using a novel strategy.
Q58616987The Bermuda Triangle: The Pragmatics, Policies, and Principles for Data Sharing in the History of the Human Genome Project
Q24606217The COT2 gene is required for glucose-dependent divalent cation transport in Saccharomyces cerevisiae
Q24562849The Saccharomyces Ty5 retrotransposon family is associated with origins of DNA replication at the telomeres and the silent mating locus HMR
Q40554098The Saccharomyces cerevisiae RAD18 gene encodes a protein that contains potential zinc finger domains for nucleic acid binding and a putative nucleotide binding sequence
Q27931096The Saccharomyces cerevisiae RIB4 gene codes for 6,7-dimethyl-8-ribityllumazine synthase involved in riboflavin biosynthesis. Molecular characterization of the gene and purification of the encoded protein
Q33968826The Saccharomyces cerevisiae RTG2 gene is a regulator of aconitase expression under catabolite repression conditions
Q36657054The Saccharomyces cerevisiae mutation elm4-1 facilitates pseudohyphal differentiation and interacts with a deficiency in phosphoribosylpyrophosphate synthase activity to cause constitutive pseudohyphal growth
Q27931733The activity of Cdc14p, an oligomeric dual specificity protein phosphatase from Saccharomyces cerevisiae, is required for cell cycle progression
Q33231648The application of markov chain analysis to oligonucleotide frequency prediction and physical mappingofDrosophila melanogaster
Q27938755The chromo domain protein chd1p from budding yeast is an ATP-dependent chromatin-modifying factor
Q40516230The complete AvrII restriction map of the Escherichia coli genome and comparisons of several laboratory strains
Q34399284The complete DNA sequence of yeast chromosome III
Q42619300The complete sequence of a 7·5 kb region of chromosome III fromSaccharomyces cerevisiae that lies betweenCRY1 andMAT
Q33287728The direct cloning of the yeast genome using the gap-filling method and the complete physical mapping of Saccharomyces cerevisiae chromosome VI
Q45997516The expected fraction of clonable genomic DNA.
Q27937278The glycerol kinase (GUT1) gene of Saccharomyces cerevisiae: cloning and characterization
Q44107802The hexose transporters of Saccharomyces cerevisiae play different roles during enological fermentation
Q39261540The human genome project
Q41785376The nucleotide sequence of Saccharomyces cerevisiae chromosome V.
Q46184436The pluses of subtraction
Q37655684The reference genome sequence of Saccharomyces cerevisiae: then and now.
Q33192366The use of simulated annealing in chromosome reconstruction experiments based on binary scoring
Q34087793The yeast genome: on the road to the Golden Age.
Q67854436ThePHO80/TUP7 locus inSaccharomyces cerevisiae is on the left arm of chromosome XV: Mapping by chromosome engineering
Q33541962Theoretical analysis of a physical mapping strategy using random single-copy landmarks
Q46388636Three copies of the ATP2 gene are arranged in tandem on chromosome X in the yeast Saccharomyces cerevisiae
Q28291009Toward a complete human genome sequence
Q37403621Toward a physical map of the genome of the nematode Caenorhabditis elegans
Q33792074Towards a physical map of the Drosophila melanogaster genome: mapping of cosmid clones within defined genomic divisions.
Q35586102Translation and M1 double-stranded RNA propagation: MAK18 = RPL41B and cycloheximide curing
Q27939582Two genes in Saccharomyces cerevisiae encode a membrane-bound form of casein kinase-1
Q27936716Two new S-phase-specific genes from Saccharomyces cerevisiae
Q68110843Variation in genomic Alu repeat density as a basis for rapid construction of low resolution physical maps of human chromosomes
Q35789947W (A or T) sequences as probes and primers suitable for genomic mapping and fingerprinting
Q34624774Whole-genome haplotyping approaches and genomic medicine
Q33223426Whole-genome validation of high-information-content fingerprinting
Q27938643Yeast Asc1p and mammalian RACK1 are functionally orthologous core 40S ribosomal proteins that repress gene expression
Q71473112Yeast SAS silencing genes and human genes associated with AML and HIV-1 Tat interactions are homologous with acetyltransferases
Q27934770Zip2, a meiosis-specific protein required for the initiation of chromosome synapsis
Q30726305zA map for sequence analysis of the Arabidopsis thaliana genome

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