Aerobic biodegradation of the chloroethenes: pathways, enzymes, ecology, and evolution

scientific article published on 08 January 2010

Aerobic biodegradation of the chloroethenes: pathways, enzymes, ecology, and evolution is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

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P356DOI10.1111/J.1574-6976.2010.00210.X
P698PubMed publication ID20146755
P5875ResearchGate publication ID41421142

P2093author name stringNicholas V Coleman
Timothy E Mattes
Anne K Alexander
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A role for coenzyme M (2-mercaptoethanesulfonic acid) in a bacterial pathway of aliphatic epoxide carboxylationQ24674887
Microbial linear plasmidsQ28239073
Isolation of a bacterium that reductively dechlorinates tetrachloroethene to etheneQ28239702
Alkene monooxygenase from Nocardia corallina B-276 is a member of the class of dinuclear iron proteins capable of stereospecific epoxygenation reactionsQ28246817
Trichloroethylene oxidation by toluene dioxygenaseQ28320135
Trichloroethylene oxidation by purified toluene 2-monooxygenase: products, kinetics, and turnover-dependent inactivationQ28379394
Identification of polypeptides expressed in response to vinyl chloride, ethene, and epoxyethane in Nocardioides sp. strain JS614 by using peptide mass fingerprintingQ28396369
Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatisQ29615255
New use of BCG for recombinant vaccinesQ29615313
Glutathione transferasesQ29616501
Rapid birth-death evolution specific to xenobiotic cytochrome P450 genes in vertebratesQ30361702
Identification of coenzyme M biosynthetic phosphosulfolactate synthase: a new family of sulfonate-biosynthesizing enzymesQ30671616
Molecular characterization of a dechlorinating community resulting from in situ biostimulation in a trichloroethene-contaminated deep, fractured basalt aquifer and comparison to a derivative laboratory cultureQ30843262
Microbial diversity in an in situ reactor system treating monochlorobenzene contaminated groundwater as revealed by 16S ribosomal DNA analysisQ30857745
Polaromonas naphthalenivorans sp. nov., a naphthalene-degrading bacterium from naphthalene-contaminated sedimentQ30890373
Formation and detoxification of reactive intermediates in the metabolism of chlorinated ethenesQ31878170
Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respirationQ32073064
Carbon isotopes as a tool to evaluate the origin and fate of vinyl chloride: laboratory experiments and modeling of isotope evolutionQ33184153
Soluble di-iron monooxygenase gene diversity in soils, sediments and ethene enrichmentsQ33248711
Transcription and mass-spectroscopic proteomic studies of electron transport oxidoreductases in Dehalococcoides ethenogenesQ33254214
Reanalysis of updated mortality among vinyl and polyvinyl chloride workers: Confirmation of historical evidence and new findingsQ33315719
Evolutionary ecology and multidisciplinary approaches to prospecting for monooxygenases as biocatalystsQ33320283
The natural chlorine cycle--fitting the scattered piecesQ33337117
Mixed aerobic and anaerobic microbial communities in benzene-contaminated groundwater.Q33397098
Heterologous expression of bacterial Epoxyalkane:Coenzyme M transferase and inducible coenzyme M biosynthesis in Xanthobacter strain Py2 and Rhodococcus rhodochrous B276.Q33790518
Molecular biology and regulation of methane monooxygenaseQ33969451
Functional and evolutionary relationships among diverse oxygenasesQ33972461
Vanadium bromoperoxidase-catalyzed biosynthesis of halogenated marine natural productsQ33983136
Evidence that a linear megaplasmid encodes enzymes of aliphatic alkene and epoxide metabolism and coenzyme M (2-mercaptoethanesulfonate) biosynthesis in Xanthobacter strain Py2Q33995869
Cometabolism of cis-1,2-dichloroethene by aerobic cultures grown on vinyl chloride as the primary substrateQ44011420
Natural formation of vinyl chloride in the terrestrial environmentQ44035855
Natural attenuation of chlorinated solvents at Area 6, Dover Air Force Base: groundwater biogeochemistryQ44080323
Field demonstration of successful bioaugmentation to achieve dechlorination of tetrachloroethene to etheneQ44275152
Biodegradation of cis-1,2-dichloroethylene and vinyl chloride in anaerobic cultures enriched from landfill leachate sediment under Fe(III)-reducing conditionsQ44568376
Bacterial metabolism of 3-chloroacrylic acidQ44658898
Detection and organization of atrazine-degrading genetic potential of seventeen bacterial isolates belonging to divergent taxa indicate a recent common origin of their catabolic functionsQ44761023
Metabolic pathway engineering to enhance aerobic degradation of chlorinated ethenes and to reduce their toxicity by cloning a novel glutathione S-transferase, an evolved toluene o-monooxygenase, and gamma-glutamylcysteine synthetaseQ44818590
Degradation of 1,1,2,2-tetrachloroethane and accumulation of vinyl chloride in wetland sediment microcosms and in situ porewater: biogeochemical controls and associations with microbial communitiesQ44833585
Stable carbon isotope fractionation during aerobic biodegradation of chlorinated ethenesQ44957309
Evaluation of genetic risks of alkylating agents. III. Alkylation of haemoglobin after metabolic conversion of ethene to ethene oxide in vivoQ45033342
Active site engineering of the epoxide hydrolase from Agrobacterium radiobacter AD1 to enhance aerobic mineralization of cis-1,2-dichloroethylene in cells expressing an evolved toluene ortho-monooxygenaseQ45044165
Modeling acute and chronic toxicity of nonpolar narcotic chemicals and mixtures to Ceriodaphnia dubiaQ45110352
Biotic and abiotic anaerobic transformations of trichloroethene and cis-1,2-dichloroethene in fractured sandstoneQ45267359
Trichloroethylene degradation by butane-oxidizing bacteria causes a spectrum of toxic effects.Q45309570
Mortality study update of ethylene oxide workers in chemical manufacturing: a 15 year update.Q46017230
Carbon and chlorine isotope fractionation during aerobic oxidation and reductive dechlorination of vinyl chloride and cis-1,2-dichloroethene.Q46125541
Concurrent ethene generation and growth of Dehalococcoides containing vinyl chloride reductive dehalogenase genes during an enhanced reductive dechlorination field demonstration.Q46143388
Natural attenuation of chloroethenes: identification of sequential reductive/oxidative biodegradation by microcosm studiesQ46340325
Carbon isotopic fractionation during aerobic vinyl chloride degradationQ46386021
Bioaugmentation potential of a vinyl chloride-assimilating Mycobacterium sp., isolated from a chloroethene-contaminated aquiferQ46554817
An ecological study of the association of environmental chemicals on breast cancer incidence in TexasQ46573360
Aerobic biodegradation of vinyl chloride and cis-1,2-dichloroethylene in aquifer sedimentsQ46637485
Isolation and characterization of Dehalococcoides sp. strain FL2, a trichloroethene (TCE)- and 1,2-dichloroethene-respiring anaerobe.Q46653979
Stable carbon isotope fractionation of chloroethenes by dehalorespiring isolates.Q46672065
Growth kinetics and stable carbon isotope fractionation during aerobic degradation of cis-1,2-dichloroethene and vinyl chlorideQ46723180
Anaerobic degradation of cis-1,2-dichloroethylene and vinyl chloride by Clostridium sp. strain DC1 isolated from landfill leachate sedimentQ46760520
Trichloroethylene: Parkinsonism and complex 1 mitochondrial neurotoxicityQ46834269
Utilization of fluoroethene as a surrogate for aerobic vinyl chloride transformationQ46941600
Evolution of bacterial and archaeal multicomponent monooxygenasesQ47613891
Biodegradation of vinyl chloride and cis-dichloroethene by a Ralstonia sp. strain TRW-1.Q48090368
Mutagenicity of chloroalkene epoxides in bacterial systemsQ50214155
The mutagenicity of chloroethylene oxide, chloroacetaldehyde, 2-chloroethanol and chloroacetic acid, conceivable metabolites of vinyl chlorideQ50227871
Mechanism controlling the extended lag period associated with vinyl chloride starvation in Nocardioides sp. strain JS614.Q51063941
Degradation of trichloroethene by a linear-plasmid-encoded alkene monooxygenase in Rhodococcus corallinus (Nocardia corallina) B-276.Q51447333
Tetrachloroethene metabolism of Dehalospirillum multivorans.Q51647182
Formation of stable chlorinated hydrocarbons in weathering plant material.Q53392952
Detection of 1,N6-ethenoadenine in rat urine after chloroethylene oxide exposure.Q53429384
Carcinogenicity of 1,3-butadiene, ethylene oxide, vinyl chloride, vinyl fluoride, and vinyl bromideQ57534681
Modeling Substrate Interactions during Aerobic Biodegradation of Mixtures of Vinyl Chloride and EtheneQ58390110
Implications of ethylene production by bacteria for biological balance of soilQ59088544
Horizontal gene transfer in metal and radionuclide contaminated soilsQ37409335
What sets Bacillus anthracis apart from other Bacillus species?Q37514144
Involvement of linear plasmids in aerobic biodegradation of vinyl chlorideQ37572507
Characterization of an isolate that uses vinyl chloride as a growth substrate under aerobic conditionsQ39486715
Cytotoxicity associated with trichloroethylene oxidation in Burkholderia cepacia G4.Q39490790
Haloalkane-utilizing Rhodococcus strains isolated from geographically distinct locations possess a highly conserved gene cluster encoding haloalkane catabolismQ39539197
Roles of horizontal gene transfer and gene integration in evolution of 1,3-dichloropropene- and 1,2-dibromoethane-degradative pathwaysQ39587105
Biodegradation of cis-dichloroethene as the sole carbon source by a beta-proteobacteriumQ39640004
Phylogenetic and kinetic diversity of aerobic vinyl chloride-assimilating bacteria from contaminated sitesQ39676832
Complete nucleotide sequence and genetic organization of the 210-kilobase linear plasmid of Rhodococcus erythropolis BD2.Q39852948
Distribution of the Coenzyme M Pathway of Epoxide Metabolism among Ethene- and Vinyl Chloride-Degrading Mycobacterium StrainsQ39913620
Purification and properties of the NADH reductase component of alkene monooxygenase from Mycobacterium strain E3Q39934222
Transfer of plasmid RSF1010 by conjugation from Escherichia coli to Streptomyces lividans and Mycobacterium smegmatisQ39945627
Microorganisms and xenobiotic compoundsQ40163223
Genetics and biochemistry of dehalogenating enzymesQ40572905
Biochemistry of the soluble methane monooxygenaseQ40572952
Microbial degradation of explosives and related compoundsQ40593984
Strategies for the aerobic co-metabolism of chlorinated solventsQ41517751
Proteomic and transcriptomic analyses reveal genes upregulated by cis-dichloroethene in Polaromonas sp. strain JS666.Q41907838
Complete nucleotide sequence of the 113-kilobase linear catabolic plasmid pAL1 of Arthrobacter nitroguajacolicus Rü61a and transcriptional analysis of genes involved in quinaldine degradationQ42067154
New adducts of chloroethylene oxide and chloroacetaldehyde with pyrimidine nucleosidesQ42222206
Involvement of coenzyme M during aerobic biodegradation of vinyl chloride and ethene by Pseudomonas putida strain AJ and Ochrobactrum sp. strain TDQ42424543
Chloroethene biodegradation in sediments at 4 degrees C.Q42590332
Physiological and molecular genetic analyses of vinyl chloride and ethene biodegradation in Nocardioides sp. strain JS614.Q42642710
Identification of two linear plasmids in the actinomycete Planobispora roseaQ42685721
Acylation of protein lysines by trichloroethylene oxideQ43503087
Adaptation of aerobic, ethene-assimilating Mycobacterium strains to vinyl chloride as a growth substrateQ43611157
Carbon isotope fractionation during abiotic reductive dehalogenation of trichloroethene (TCE).Q43712975
Transition from cometabolic to growth-linked biodegradation of vinyl chloride by a Pseudomonas sp. isolated on etheneQ43805782
Transformation of Mycobacterium aurum and Mycobacterium smegmatis with the broad host-range gram-negative cosmid vector pJRD215.Q43874985
Evaluating the fate of chlorinated ethenes in streambed sediments by combining stable isotope, geochemical and microbial methods.Q43967872
Molecular analysis of Dehalococcoides 16S ribosomal DNA from chloroethene-contaminated sites throughout North America and EuropeQ34099848
Epoxyalkane: coenzyme M transferase in the ethene and vinyl chloride biodegradation pathways of mycobacterium strain JS60.Q34226726
The natural production of chlorinated compoundsQ34278869
Quantitative PCR confirms purity of strain GT, a novel trichloroethene-to-ethene-respiring Dehalococcoides isolateQ34432370
Molecular and cellular fundamentals of aerobic cometabolism of trichloroethyleneQ34441017
Complete detoxification of vinyl chloride by an anaerobic enrichment culture and identification of the reductively dechlorinating population as a Dehalococcoides species.Q34539924
Key scientific issues in the health risk assessment of trichloroethyleneQ35039295
Aliphatic epoxide carboxylationQ35043772
Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatilityQ35108186
Genomic islands and the evolution of catabolic pathways in bacteriaQ35172595
The role of mobile genetic elements in bacterial adaptation to xenobiotic organic compoundsQ35172600
Integration of SCP1, a giant linear plasmid, into the Streptomyces coelicolor chromosomeQ35229375
Evolution of the soluble diiron monooxygenasesQ35556394
Divergence of mobile genetic elements involved in the distribution of xenobiotic-catabolic capacity.Q35613132
Characterization of three protein components required for functional reconstitution of the epoxide carboxylase multienzyme complex from Xanthobacter strain Py2.Q35623194
Comparative proteomics of Dehalococcoides spp. reveals strain-specific peptides associated with activityQ35633957
Sigma factors and global gene regulation in Mycobacterium tuberculosisQ35648489
Epidemiology of drug resistance: implications for a post-antimicrobial eraQ35748958
Glutathione-dependent bioactivation of haloalkanes and haloalkenesQ35956168
The plasmids of Borrelia burgdorferi: essential genetic elements of a pathogenQ35999642
The evolution of IncP catabolic plasmids.Q36165508
Comparative genetic organization of incompatibility group P degradative plasmidsQ36191663
A new concept linking observable stable isotope fractionation to transformation pathways of organic pollutantsQ36275381
Diversity, distribution and divergence of lin genes in hexachlorocyclohexane-degrading sphingomonadsQ36394482
The biochemistry of methane oxidationQ36747482
Polaromonas vacuolata gen. nov., sp. nov., a psychrophilic, marine, gas vacuolate bacterium from AntarcticaQ36816803
Genomes of the symbiotic nitrogen-fixing bacteria of legumes.Q36843637
Aerobic degradation of lindane (gamma-hexachlorocyclohexane) in bacteria and its biochemical and molecular basisQ36883710
Getting a handle on the role of coenzyme M in alkene metabolismQ36898602
The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon- and xenobiotic-degrading bacterium, and features of relevance to biotechnologyQ36943483
Real-time PCR quantification of Dehalococcoides populations: methods and applicationsQ37031071
Biochemical and genetic bases of dehalorespiration.Q37095462
Evidence of autoimmune-related effects of trichloroethylene exposure from studies in mice and humansQ37201162
Virulence mechanisms of Gram-positive plant pathogenic bacteriaQ37221195
P433issue4
P921main subjectbiodegradationQ696715
P6104maintained by WikiProjectWikiProject EcologyQ10818384
P304page(s)445-475
P577publication date2010-01-08
P1433published inFEMS Microbiology ReviewsQ15762226
P1476titleAerobic biodegradation of the chloroethenes: pathways, enzymes, ecology, and evolution
P478volume34

Reverse relations

cites work (P2860)
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Q37980370Abiotic degradation of chlorinated ethanes and ethenes in water
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Q43317027Aerobic biodegradation of trichloroethene without auxiliary substrates
Q51587647Assessment and modification of degenerate qPCR primers that amplify functional genes from etheneotrophs and vinyl chloride-assimilators.
Q40385408Assessment of biostimulation and bioaugmentation for removing chlorinated volatile organic compounds from groundwater at a former manufacture plant.
Q40751940Association of missense mutations in epoxyalkane coenzyme M transferase with adaptation of Mycobacterium sp. strain JS623 to growth on vinyl chloride
Q26738424Bioaugmentation: An Emerging Strategy of Industrial Wastewater Treatment for Reuse and Discharge
Q41693573Biodegradation of Volatile Organic Compounds and Their Effects on Biodegradability under Co-Existing Conditions
Q90560126Combining nanoscale zero-valent iron with electrokinetic treatment for remediation of chlorinated ethenes and promoting biodegradation: A long-term field study
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