| scholarly article | Q13442814 |
| P50 | author | Andrew F. Read | Q19973479 |
| Juliet Pulliam | Q58040296 | ||
| James O. Lloyd-Smith | Q41048054 | ||
| P2093 | author name string | Kim M Pepin | |
| Sandra Lass | |||
| P2860 | cites work | Fine-tuning translation kinetics selection as the driving force of codon usage bias in the hepatitis A virus capsid | Q21131562 |
| Interspecies and intraspecies transmission of triple reassortant H3N2 influenza A viruses | Q21245134 | ||
| Mutational fitness effects in RNA and single-stranded DNA viruses: common patterns revealed by site-directed mutagenesis studies | Q22065913 | ||
| Fitness and its role in evolutionary genetics | Q22122004 | ||
| Microbial genetics: Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation | Q22122024 | ||
| 1918 Influenza: the mother of all pandemics | Q22305649 | ||
| Host range and emerging and reemerging pathogens | Q24273386 | ||
| Global trends in emerging infectious diseases | Q24575990 | ||
| Genomic signatures of human versus avian influenza A viruses | Q24623524 | ||
| Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells | Q27469361 | ||
| Venezuelan encephalitis emergence mediated by a phylogenetically predicted viral mutation | Q27473190 | ||
| Evolutionary reversals during viral adaptation to alternating hosts | Q27473193 | ||
| Bats: important reservoir hosts of emerging viruses | Q27473464 | ||
| Arbovirus evolution in vivo is constrained by host alternation | Q27486082 | ||
| Cross-Species Virus Transmission and the Emergence of New Epidemic Diseases | Q27486915 | ||
| Mosquitoes Put the Brake on Arbovirus Evolution: Experimental Evolution Reveals Slower Mutation Accumulation in Mosquito Than Vertebrate Cells | Q27488421 | ||
| Experimental Passage of St. Louis Encephalitis Virus In Vivo in Mosquitoes and Chickens Reveals Evolutionarily Significant Virus Characteristics | Q27490341 | ||
| Structural Analysis of Major Species Barriers between Humans and Palm Civets for Severe Acute Respiratory Syndrome Coronavirus Infections | Q27650493 | ||
| Molecular virology: was the 1918 pandemic caused by a bird flu? | Q28236775 | ||
| The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme | Q28237797 | ||
| Genomic evolution in a virus under specific selection for host recognition | Q45390661 | ||
| Positive selection of synonymous mutations in vesicular stomatitis virus | Q45589215 | ||
| Episodic adaptive evolution of primate lysozymes | Q48055066 | ||
| Ability to replicate in the cytoplasm predicts zoonotic transmission of livestock viruses. | Q51665714 | ||
| Evolution and emergence of novel human infections. | Q51800132 | ||
| Evaluating the importance of within- and between-host selection pressures on the evolution of chronic pathogens. | Q51905100 | ||
| Virus Evolution: Insights from an Experimental Approach | Q57052270 | ||
| Preliminary review of D222G amino acid substitution in the haemagglutinin of pandemic influenza A (H1N1) 2009 viruses | Q57108854 | ||
| Virulence evolution and the timing of disease life-history events | Q60492189 | ||
| Host-related nucleotide composition and codon usage as driving forces in the recent evolution of the Astroviridae | Q79450580 | ||
| Optimizing within-host viral fitness: infected cell lifespan and virion production rate | Q80221968 | ||
| Variable epistatic effects between mutations at host recognition sites in phiX174 bacteriophage | Q80542831 | ||
| Identification of two critical amino acid residues of the severe acute respiratory syndrome coronavirus spike protein for its variation in zoonotic tropism transition via a double substitution strategy. | Q43218942 | ||
| Host mixing and disease emergence | Q43733812 | ||
| Adaptionism-30 years after Gould and Lewontin | Q43890932 | ||
| Modeling host-parasite coevolution: a nested approach based on mechanistic models | Q44660406 | ||
| Evolution of virulence: interdependence, constraints, and selection using nested models | Q44755803 | ||
| A genetic background with low mutational robustness is associated with increased adaptability to a novel host in an RNA virus | Q45381935 | ||
| Multiple amino acid substitutions are involved in the adaptation of H9N2 avian influenza virus to mice | Q45385536 | ||
| Bayesian phylogeography finds its roots | Q28259572 | ||
| Characterization of the 1918 influenza virus polymerase genes | Q28275749 | ||
| Parallel genotypic adaptation: when evolution repeats itself | Q28757842 | ||
| Emerging infectious diseases of wildlife--threats to biodiversity and human health | Q29617659 | ||
| Superspreading and the effect of individual variation on disease emergence | Q29618989 | ||
| Unifying the epidemiological and evolutionary dynamics of pathogens | Q29619092 | ||
| In vitro and in vivo characterization of new swine-origin H1N1 influenza viruses | Q29619174 | ||
| Avian flu: influenza virus receptors in the human airway | Q29619374 | ||
| Influenza as a model system for studying the cross-species transfer and evolution of the SARS coronavirus. | Q30342635 | ||
| The viral polymerase mediates adaptation of an avian influenza virus to a mammalian host. | Q30352150 | ||
| SARS molecular epidemiology: a Chinese fairy tale of controlling an emerging zoonotic disease in the genomics era. | Q30360085 | ||
| Persistent host markers in pandemic and H5N1 influenza viruses | Q30363055 | ||
| Bats, civets and the emergence of SARS. | Q30364520 | ||
| Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis. | Q30368054 | ||
| Phylogenetic analysis reveals the emergence, evolution and dispersal of carnivore parvoviruses. | Q30371688 | ||
| Adaptation of human influenza H3N2 virus in a mouse pneumonitis model: insights into viral virulence, tissue tropism and host pathogenesis. | Q30373118 | ||
| Different evolutionary trajectories of European avian-like and classical swine H1N1 influenza A viruses. | Q30375647 | ||
| Minimal molecular constraints for respiratory droplet transmission of an avian-human H9N2 influenza A virus | Q30376280 | ||
| Conserved amino acid markers from past influenza pandemic strains. | Q30376366 | ||
| Evolution of the M gene of the influenza A virus in different host species: large-scale sequence analysis. | Q30377641 | ||
| Dating the emergence of pandemic influenza viruses | Q30378899 | ||
| Identifying changes in selective constraints: host shifts in influenza. | Q30382498 | ||
| Introduction of virulence markers in PB2 of pandemic swine-origin influenza virus does not result in enhanced virulence or transmission. | Q30385332 | ||
| Observed association between the HA1 mutation D222G in the 2009 pandemic influenza A(H1N1) virus and severe clinical outcome, Norway 2009-2010. | Q30386473 | ||
| Substitution of lysine at 627 position in PB2 protein does not change virulence of the 2009 pandemic H1N1 virus in mice | Q30387050 | ||
| OpenFluDB, a database for human and animal influenza virus | Q30391319 | ||
| Differential stepwise evolution of SARS coronavirus functional proteins in different host species | Q33414885 | ||
| Discovering the phylodynamics of RNA viruses | Q33512517 | ||
| Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human | Q33849474 | ||
| Fitness epistasis and constraints on adaptation in a human immunodeficiency virus type 1 protein region | Q33853183 | ||
| Synthesizing within-host and population-level selective pressures on viral populations: the impact of adaptive immunity on viral immune escape | Q33952205 | ||
| On the definition and the computation of the basic reproduction ratio R0 in models for infectious diseases in heterogeneous populations | Q34155650 | ||
| The role of evolution in the emergence of infectious diseases | Q34282868 | ||
| Positively charged amino acid substitutions in the e2 envelope glycoprotein are associated with the emergence of venezuelan equine encephalitis virus | Q34331476 | ||
| Different trajectories of parallel evolution during viral adaptation | Q34504264 | ||
| Pleiotropic costs of niche expansion in the RNA bacteriophage phi 6. | Q34587807 | ||
| Variable pleiotropic effects from mutations at the same locus hamper prediction of fitness from a fitness component | Q34588639 | ||
| Experimental evolution recapitulates natural evolution | Q35212924 | ||
| Molecular epidemiology of SARS-associated coronavirus, Beijing | Q35847365 | ||
| Susceptibility of North American ducks and gulls to H5N1 highly pathogenic avian influenza viruses | Q36023631 | ||
| The pluses and minuses of R0 | Q36138176 | ||
| New approaches to quantifying the spread of infection | Q36182958 | ||
| Pattern of mutation in the genome of influenza A virus on adaptation to increased virulence in the mouse lung: identification of functional themes | Q36240827 | ||
| Combinations of two capsid regions controlling canine host range determine canine transferrin receptor binding by canine and feline parvoviruses | Q36464309 | ||
| A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza A virus. | Q36836676 | ||
| Pathways of cross-species transmission of synthetically reconstructed zoonotic severe acute respiratory syndrome coronavirus | Q36845879 | ||
| Wild ducks as long-distance vectors of highly pathogenic avian influenza virus (H5N1) | Q36944898 | ||
| Within-host genetic diversity of endemic and emerging parvoviruses of dogs and cats | Q36949820 | ||
| Experimental evolution of human influenza virus H3 hemagglutinin in the mouse lung identifies adaptive regions in HA1 and HA2. | Q36974668 | ||
| Predicting evolution from genomics: experimental evolution of bacteriophage T7. | Q37062923 | ||
| PB2 protein of a highly pathogenic avian influenza virus strain A/chicken/Yamaguchi/7/2004 (H5N1) determines its replication potential in pigs | Q37099830 | ||
| Reliabilities of identifying positive selection by the branch-site and the site-prediction methods | Q37167614 | ||
| Early control of H5N1 influenza virus replication by the type I interferon response in mice. | Q37191923 | ||
| The role of RNA folding free energy in the evolution of the polymerase genes of the influenza A virus | Q37207159 | ||
| Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences | Q37425283 | ||
| Epidemic dynamics at the human-animal interface. | Q37477880 | ||
| Ecology of H3 avian influenza viruses in Korea and assessment of their pathogenic potentials | Q38501809 | ||
| Incongruent fitness landscapes, not tradeoffs, dominate the adaptation of vesicular stomatitis virus to novel host types | Q39747184 | ||
| Evolutionary genomics of host adaptation in vesicular stomatitis virus | Q40000526 | ||
| Adaptation of an H7N7 equine influenza A virus in mice | Q40179325 | ||
| Long-term transmission of defective RNA viruses in humans and Aedes mosquitoes | Q40488747 | ||
| Reservoir interactions and disease emergence | Q42090196 | ||
| Envelope glycoprotein mutations mediate equine amplification and virulence of epizootic venezuelan equine encephalitis virus | Q42589716 | ||
| Branching process models for surveillance of infectious diseases controlled by mass vaccination | Q42606341 | ||
| Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China | Q42618656 | ||
| Emerging infectious pathogens of wildlife. | Q42728385 | ||
| Pathogenicity and transmission studies of H7N7 avian influenza virus isolated from feces of magpie origin in chickens and magpie | Q43174659 | ||
| Comparative Susceptibility of Selected Avian and Mammalian Species to a Hong Kong–Origin H5N1 High-Pathogenicity Avian Influenza Virus | Q43210834 | ||
| Molecular constraints to interspecies transmission of viral pathogens | Q43218456 | ||
| P433 | issue | 11 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 802-813 | |
| P577 | publication date | 2010-10-12 | |
| P1433 | published in | Nature Reviews Microbiology | Q1071797 |
| P1476 | title | Identifying genetic markers of adaptation for surveillance of viral host jumps | |
| P478 | volume | 8 |
| Q38703304 | A molecular arms race between host innate antiviral response and emerging human coronaviruses |
| Q30407036 | Anticipating the species jump: surveillance for emerging viral threats |
| Q30387318 | Applying evolutionary biology to address global challenges |
| Q28606950 | Bacillus thuringiensis Is an Environmental Pathogen and Host-Specificity Has Developed as an Adaptation to Human-Generated Ecological Niches |
| Q38031603 | Bacterial pathogens: from natural ecosystems to human hosts |
| Q98286144 | Comparative genetic diversity of Cryptosporidium species causing human infections |
| Q37289772 | Comparing methods for estimating R0 from the size distribution of subcritical transmission chains. |
| Q92903780 | Comparison of intra- and inter-host genetic diversity in rabies virus during experimental cross-species transmission |
| Q54210967 | Computational analysis of the receptor binding specificity of novel influenza A/H7N9 viruses. |
| Q38776765 | Constrained evolvability of interferon suppression in an RNA virus |
| Q34428729 | Detecting differential transmissibilities that affect the size of self-limited outbreaks. |
| Q30361448 | Detection of the influenza A(H1N1)pdm09 virus carrying the K-15E, P83S and Q293H mutations in patients who have undergone bone marrow transplant |
| Q55278660 | Does pathogen plasticity facilitate host shifts? |
| Q39024568 | Drivers of variation in species impacts for a multi-host fungal disease of bats |
| Q51054952 | Editorial overview: Emerging viruses: interspecies transmission. |
| Q62564503 | Emerging infectious diseases and biological invasions: a call for a One Health collaboration in science and management |
| Q54558245 | Emerging infectious diseases: prediction and detection. |
| Q93081113 | Evolution and Interspecies Transmission of Canine Distemper Virus-An Outlook of the Diverse Evolutionary Landscapes of a Multi-Host Virus |
| Q58699986 | Evolutionary emergence of infectious diseases in heterogeneous host populations |
| Q59350377 | Existing host range mutations constrain further emergence of RNA viruses |
| Q41140967 | Expected Effect of Deleterious Mutations on Within-Host Adaptation of Pathogens |
| Q28548089 | Extremely High Mutation Rate of HIV-1 In Vivo |
| Q35018014 | Feature selection methods for identifying genetic determinants of host species in RNA viruses. |
| Q45326386 | First experimental assessment of protein intrinsic disorder involvement in an RNA virus natural adaptive process |
| Q57831138 | Fogarty International Center collaborative networks in infectious disease modeling: lessons learnt in research and capacity building |
| Q28483231 | From molecular genetics to phylodynamics: evolutionary relevance of mutation rates across viruses |
| Q33955342 | Genomic and protein structural maps of adaptive evolution of human influenza A virus to increased virulence in the mouse |
| Q35215367 | Global health: the Fogarty International Center, National Institutes of Health: vision and mission, programs, and accomplishments |
| Q34602475 | Highly pathogenic H5N1 influenza A virus strains provoke heterogeneous IFN-α/β responses that distinctively affect viral propagation in human cells |
| Q37402042 | Human Adaptation of Ebola Virus during the West African Outbreak |
| Q36023199 | Identical consensus sequence and conserved genomic polymorphism of hepatitis E virus during controlled interspecies transmission |
| Q43172080 | Identification of three H1N1 influenza virus groups with natural recombinant genes circulating from 1918 to 2009. |
| Q27321390 | Identifying selection in the within-host evolution of influenza using viral sequence data |
| Q30363291 | Infection and pathogenesis of canine, equine, and human influenza viruses in canine tracheas |
| Q34711751 | Inference of R(0) and transmission heterogeneity from the size distribution of stuttering chains |
| Q33694793 | Insight into the global evolution of Rodentia associated Morbilli-related paramyxoviruses |
| Q35686524 | Integrated cluster- and case-based surveillance for detecting stage III zoonotic pathogens: an example of Nipah virus surveillance in Bangladesh |
| Q24277713 | Modeling infectious disease dynamics in the complex landscape of global health |
| Q30364868 | Molecular determinants of influenza virus pathogenesis in mice. |
| Q36918054 | Multiple scales of selection influence the evolutionary emergence of novel pathogens |
| Q40083193 | Next step in the ongoing arms race between myxoma virus and wild rabbits in Australia is a novel disease phenotype |
| Q36468417 | Nine challenges in modelling the emergence of novel pathogens |
| Q38680074 | Opportunities and challenges in modeling emerging infectious diseases. |
| Q51271219 | Pathogen population bottlenecks and adaptive landscapes: overcoming the barriers to disease emergence. |
| Q30660918 | Pathogen-host associations and predicted range shifts of human monkeypox in response to climate change in central Africa |
| Q36778852 | Pathogen-host-environment interplay and disease emergence |
| Q30234329 | Pathways to zoonotic spillover. |
| Q46283091 | Patterns of selection on Plasmodium falciparum erythrocyte-binding antigens after the colonization of the New World |
| Q34611164 | Phylodynamic analysis of the emergence and epidemiological impact of transmissible defective dengue viruses |
| Q30354239 | Possibility of cross-species/subtype reassortments in influenza A viruses: an analysis of nonstructural protein variations. |
| Q42234077 | Potential Intercontinental Movement of Influenza A(H7N9) Virus into North America by Wild Birds: Application of a Rapid Assessment Framework. |
| Q30424289 | Prediction and prevention of the next pandemic zoonosis |
| Q37547542 | Quantitative modeling of virus evolutionary dynamics and adaptation in serial passages using empirically inferred fitness landscapes |
| Q34250057 | Repeatability and contingency in the evolution of a key innovation in phage lambda |
| Q40097519 | Reverse engineering field isolates of myxoma virus demonstrates that some gene disruptions or loss of function do not explain virulence changes observed in the field |
| Q35612506 | SARS-CoV and emergent coronaviruses: viral determinants of interspecies transmission |
| Q97905416 | Self-disseminating vaccines to suppress zoonoses |
| Q62478185 | Sequential evolution of virulence and resistance during clonal spread of community-acquired methicillin-resistant |
| Q40951839 | Single-Cell Analysis of RNA Virus Infection Identifies Multiple Genetically Diverse Viral Genomes within Single Infectious Units |
| Q50021304 | The distribution of mutational fitness effects of phage φX174 on different hosts |
| Q34172624 | The ecology of emerging infectious diseases in migratory birds: an assessment of the role of climate change and priorities for future research |
| Q92518169 | The effect of mutations derived from mouse-adapted H3N2 seasonal influenza A virus to pathogenicity and host adaptation |
| Q92550311 | Understanding the emergence of bacterial pathogens in novel hosts |
| Q28079768 | Urbanization and Disease Emergence: Dynamics at the Wildlife-Livestock-Human Interface |
| Q37037427 | Vacated niches, competitive release and the community ecology of pathogen eradication |
| Q28539101 | Variation in RNA virus mutation rates across host cells |
| Q30353598 | Virus-specific factors associated with zoonotic and pandemic potential. |
| Q36767215 | What can we predict about viral evolution and emergence? |
| Q36076236 | Whole-Genome Analysis of a Novel Fish Reovirus (MsReV) Discloses Aquareovirus Genomic Structure Relationship with Host in Saline Environments |
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