MicroRNAs and their diverse functions in plants

scientific article published on 27 August 2011

MicroRNAs and their diverse functions in plants is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1007/S11103-011-9817-6
P698PubMed publication ID21874378
P5875ResearchGate publication ID51602392

P2093author name stringGuiling Sun
P2860cites workThe fate of miRNA* strand through evolutionary analysis: implication for degradation as merely carrier strand or potential regulatory molecule?Q21091124
The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesisQ24314338
Genome-wide computational identification of microRNAs and their targets in the deep-branching eukaryote Giardia lambliaQ84488429
MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genesQ24522760
MicroRNA genes are transcribed by RNA polymerase IIQ24562649
Salt and drought stress signal transduction in plantsQ24599872
MicroRNA biogenesis: there's more than one way to skin a catQ24642062
Expression profiling of microRNAs by deep sequencingQ24646309
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Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradomeQ24656974
MicroRNAs in plantsQ24674274
miRU: an automated plant miRNA target prediction serverQ24812296
RNA interference is mediated by 21- and 22-nucleotide RNAsQ27860764
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targetsQ27860792
Origins and Mechanisms of miRNAs and siRNAsQ27860822
The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14Q27860849
Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?Q27860893
MicroRNAs: small RNAs with a big role in gene regulationQ27860896
Biogenesis of small RNAs in animalsQ27861013
MicroRNAs: genomics, biogenesis, mechanism, and functionQ27861070
CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thalianaQ28201415
Prediction of plant microRNA targetsQ28219387
Origin, biogenesis, and activity of plant microRNAsQ28236171
MicroRNAS and their regulatory roles in plantsQ28237934
Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stagesQ28239195
The F-box protein TIR1 is an auxin receptorQ28253006
Identification of virus-encoded microRNAsQ28259309
Computational identification of plant microRNAs and their targets, including a stress-induced miRNAQ28267244
Modulation of floral development by a gibberellin-regulated microRNAQ28269394
MicroRNA395 mediates regulation of sulfate accumulation and allocation in Arabidopsis thalianaQ28279041
Posttranscriptional regulation of microRNA biogenesis in animalsQ28282519
Long-distance, graft-transmissible action of Arabidopsis FLOWERING LOCUS T protein to promote floweringQ28296674
Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genusQ28751812
Dual coding of siRNAs and miRNAs by plant transposable elementsQ28754895
Conservation and evolution of miRNA regulatory programs in plant developmentQ28756681
High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genesQ28763700
PLANT CELLULAR AND MOLECULAR RESPONSES TO HIGH SALINITY.Q38462807
SERRATE: a new player on the plant microRNA scene.Q38778370
Salt and drought stresses induce the aberrant expression of microRNA genes in tobaccoQ39011154
Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stressQ39148226
Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling arrayQ39225436
Identification of microRNAs and their targets in switchgrass, a model biofuel plant speciesQ39226716
Over-expression of microRNA169 confers enhanced drought tolerance to tomatoQ39627449
Identification of drought-induced microRNAs in riceQ39628436
Evolution of Arabidopsis thaliana microRNAs from random sequencesQ41491163
Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate.Q41774858
Degradation of microRNAs by a family of exoribonucleases in ArabidopsisQ42076606
Methylation as a crucial step in plant microRNA biogenesisQ42119452
MicroRNA399 is a long-distance signal for the regulation of plant phosphate homeostasisQ43078155
MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thalianaQ43091562
The interaction between DCL1 and HYL1 is important for efficient and precise processing of pri-miRNA in plant microRNA biogenesis.Q43207511
SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signalsQ44134058
Developmental changes due to long-distance movement of a homeobox fusion transcript in tomato.Q44585643
Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from ArabidopsisQ44862854
Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) BeauvQ45327445
Target-align: a tool for plant microRNA target identificationQ45344146
Criteria for annotation of plant MicroRNAsQ45753629
Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arraysQ46119560
Identification of conserved microRNAs and their targets from Solanum lycopersicum MillQ46204913
Gene regulation: ancient microRNA target sequences in plantsQ46678965
Plant paralog to viral movement protein that potentiates transport of mRNA into the phloemQ46861750
Identification of microRNA in the protist Trichomonas vaginalisQ46916061
MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organsQ47329189
A toolkit for analysing large-scale plant small RNA datasetsQ48073452
Computational identification of novel microRNAs and targets in Brassica napusQ48080835
Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in riceQ48123879
Identification and characterization of new plant microRNAs using EST analysis.Q48136551
MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root developmentQ48142660
TAPIR, a web server for the prediction of plant microRNA targets, including target mimicsQ49171783
A link between RNA metabolism and silencing affecting Arabidopsis development.Q51956889
Identification of plant microRNA homologs.Q51959147
Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319.Q51981702
Computational identification of microRNAs and their targets.Q52001015
Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation.Q52106045
Identification and characterization of microRNAs and their target genes in tobacco (Nicotiana tabacum)Q54413531
Specific Effects of MicroRNAs on the Plant TranscriptomeQ57167516
A Plant miRNA Contributes to Antibacterial Resistance by Repressing Auxin SignalingQ57748263
Characterizing viral microRNAs and its application on identifying new microRNAs in virusesQ79432057
The properties and functions of virus encoded microRNA, siRNA, and other small noncoding RNAsQ79757768
Control of root cap formation by MicroRNA-targeted auxin response factors in ArabidopsisQ80352059
Identification of cotton microRNAs and their targetsQ80489926
Evidence that miRNAs are different from other RNAsQ82183568
microRNA functionsQ29547393
Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genesQ29617907
Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNAQ29618382
Control of leaf morphogenesis by microRNAsQ29618435
A microRNA as a translational repressor of APETALA2 in Arabidopsis flower developmentQ29618436
Identification of miRNAs and their target genes in developing soybean seeds by deep sequencingQ30995522
Novel and stress-regulated microRNAs and other small RNAs from ArabidopsisQ31095568
Cloning and characterization of microRNAs from riceQ33213539
Identification of new small non-coding RNAs from tobacco and ArabidopsisQ33218535
Cloning and characterization of micro-RNAs from mossQ33222913
The small RNA repertoire of Dictyostelium discoideum and its regulation by components of the RNAi pathwayQ33301610
Identification of novel and candidate miRNAs in rice by high throughput sequencingQ33321962
Phloem long-distance transport of CmNACP mRNA: implications for supracellular regulation in plantsQ33333996
Regulation of Arabidopsis shoot apical meristem and lateral organ formation by microRNA miR166g and its AtHD-ZIP target genesQ33341380
Global identification of microRNA-target RNA pairs by parallel analysis of RNA endsQ33341604
Piecing the puzzle together: genetic requirements for miRNA biogenesis in Arabidopsis thalianaQ33347945
Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutantQ33368160
Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradomeQ33413039
Transcriptional profiling in response to terminal drought stress reveals differential responses along the wheat genomeQ33474176
Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysisQ33540822
Computational identification of microRNAs in apple expressed sequence tags and validation of their precise sequences by miR-RACE.Q33704402
Nuclear processing and export of microRNAs in Arabidopsis.Q33928450
Widespread translational inhibition by plant miRNAs and siRNAsQ34011733
Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteinsQ34102315
MiR398 and plant stress responsesQ34178602
miRNAs on the move: miRNA biogenesis and the RNAi machineryQ34320973
Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thalianaQ34371398
Plant microRNA: a small regulatory molecule with big impactQ34472479
miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtiiQ34632978
MicroRNA-mediated regulation of stomatal development in ArabidopsisQ34664125
Identification and characterization of small RNAs from the phloem of Brassica napusQ34713908
Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formationQ34761848
Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thalianaQ34763862
Biotic and abiotic stress down-regulate miR398 expression in ArabidopsisQ34923041
Dicer-like (DCL) proteins in plantsQ34946584
Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.).Q34964551
Differential and dynamic regulation of miR398 in response to ABA and salt stress in Populus tremula and Arabidopsis thaliana.Q34987328
MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutantQ35056720
Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal bodyQ35720413
A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtiiQ35783043
Plant and animal microRNAs: similarities and differences.Q36117007
MicroRNA biogenesis and function in plantsQ36250139
Engineering drought tolerance in plants: discovering and tailoring genes to unlock the futureQ36403876
MicroRNAs and their regulatory roles in animals and plantsQ36649761
The role of microRNAs in sensing nutrient stressQ36722471
Why cells move messages: the biological functions of mRNA localizationQ36775985
Reconstituting plant miRNA biogenesisQ36786965
Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in ArabidopsisQ37114917
Evolution of plant microRNAs and their targetsQ37172685
Differential expression of miRNAs in response to salt stress in maize rootsQ37254200
Two cap-binding proteins CBP20 and CBP80 are involved in processing primary MicroRNAsQ37292978
Sliced microRNA targets and precise loop-first processing of MIR319 hairpins revealed by analysis of the Physcomitrella patens degradomeQ37426596
Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.Q37452372
Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions.Q37494389
Translational inhibition by microRNAs in plantsQ37617997
The many roles of small RNAs in leaf development.Q37695613
Plant microRNAs: An insight into their gene structures and evolutionQ37778422
Small RNAs are on the move.Q37791829
MicroRNA functions in stress responses.Q37802036
Form, function, and regulation of ARGONAUTE proteins.Q37823803
MicroRNA networks and developmental plasticity in plantsQ37861927
P433issue1
P921main subjectmicroRNAQ310899
P1104number of pages20
P304page(s)17-36
P577publication date2011-08-27
P1433published inPlant Molecular BiologyQ15761850
P1476titleMicroRNAs and their diverse functions in plants
P478volume80

Reverse relations

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