Evolutionary shifts in gene expression decoupled from gene duplication across functionally distinct spider silk glands

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Evolutionary shifts in gene expression decoupled from gene duplication across functionally distinct spider silk glands is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1091148263
P356DOI10.1038/S41598-017-07388-1
P932PMC publication ID5566633
P698PubMed publication ID28827773

P50authorCheryl Y. HayashiQ5092736
Jessica E. GarbQ21393059
P2093author name stringNadia A Ayoub
Thomas H Clarke
Robert A Haney
R Crystal Chaw
P2860cites workSpider web glue: two proteins expressed from opposite strands of the same DNA sequence.Q52698828
The Role of Behavior in the Evolution of Spiders, Silks, and WebsQ54086600
The structure and properties of spider silkQ56113347
Untangling the Tangle-Web: Web Construction Behavior of the Comb-Footed Spider Steatoda triangulosa and Comments on Phylogenetic Implications (Araneae: Theridiidae)Q56227904
Morphological phylogeny of cobweb spiders and their relatives (Araneae, Araneoidea, Theridiidae)Q56595014
phytools: an R package for phylogenetic comparative biology (and other things)Q56659873
AgBase: a functional genomics resource for agricultureQ21266584
Untangling spider silk evolution with spidroin terminal domainsQ21284118
Comparative studies of gene expression and the evolution of gene regulationQ22122000
Gene ontology: tool for the unification of biologyQ23781406
A scaling normalization method for differential expression analysis of RNA-seq dataQ24628783
Reconstructing web evolution and spider diversification in the molecular eraQ24657258
A neutral model of transcriptome evolutionQ24796827
edgeR: a Bioconductor package for differential expression analysis of digital gene expression dataQ27860819
Spider Transcriptomes Identify Ancient Large-Scale Gene Duplication Event Potentially Important in Silk Gland EvolutionQ28645675
Comprehensive Proteomic Analysis of Spider Dragline Silk from Black Widows: A Recipe to Build Synthetic Silk FibersQ28828898
APE: Analyses of Phylogenetics and Evolution in R languageQ29546513
SignalP 4.0: discriminating signal peptides from transmembrane regionsQ29547202
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genomeQ29547458
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analysesQ29547690
The evolution of gene expression levels in mammalian organsQ29617170
Dragline silk: a fiber assembled with low-molecular-weight cysteine-rich proteinsQ30855367
A reanalysis of mouse ENCODE comparative gene expression dataQ30984617
Modular evolution of egg case silk genes across orb-weaving spider superfamiliesQ33220848
Spider egg case core fibers: trimeric complexes assembled from TuSp1, ECP-1, and ECP-2.Q33236236
Analysis of aqueous glue coating proteins on the silk fibers of the cob weaver, Latrodectus hesperusQ33274724
Spider minor ampullate silk proteins are constituents of prey wrapping silk in the cob weaver Latrodectus hesperus.Q33326283
Selectivity in mammalian extinction risk and threat types: a new measure of phylogenetic signal strength in binary traitsQ33534424
Gene ontology analysis for RNA-seq: accounting for selection biasQ33861598
Origins, evolution, and phenotypic impact of new genes.Q34153587
Variation in protein intake induces variation in spider silk expressionQ34171186
Phylogenomics resolves a spider backbone phylogeny and rejects a prevailing paradigm for orb web evolutionQ34429890
Silken toolkits: biomechanics of silk fibers spun by the orb web spider Argiope argentata (Fabricius 1775).Q34540365
Comparison of the transcriptional landscapes between human and mouse tissuesQ34661232
Complex gene expression in the dragline silk producing glands of the Western black widow (Latrodectus hesperus).Q35057486
Changes in the adhesive properties of spider aggregate glue during the evolution of cobwebsQ35551357
Evidence from Multiple Species that Spider Silk Glue Component ASG2 is a SpidroinQ35923413
Spider glue proteins have distinct architectures compared with traditional spidroin family members.Q36332790
LIKELIHOOD OF ANCESTOR STATES IN ADAPTIVE RADIATION.Q36387652
Ancient properties of spider silks revealed by the complete gene sequence of the prey-wrapping silk protein (AcSp1).Q36586460
Evolutionary dynamics of gene and isoform regulation in Mammalian tissues.Q36598797
Silk properties determined by gland-specific expression of a spider fibroin gene familyQ36795730
Gene-specific patterns of expression variation across organs and speciesQ37077066
Proteomic Evidence for Components of Spider Silk Synthesis from Black Widow Silk Glands and Fibers.Q37360453
Recombinant spider silk proteins for applications in biomaterials.Q37770103
Spider silk proteins: recent advances in recombinant production, structure-function relationships and biomedical applicationsQ37776429
Extreme diversity, conservation, and convergence of spider silk fibroin sequencesQ42054415
Evidence from flagelliform silk cDNA for the structural basis of elasticity and modular nature of spider silksQ42673149
Prey type, vibrations and handling interactively influence spider silk expressionQ42841391
Spit and venom from scytodes spiders: a diverse and distinct cocktail.Q43792734
TESTING ADAPTIVE RADIATION AND KEY INNOVATION HYPOTHESES IN SPIDERS.Q45060439
Inferring regulatory change from gene expression: the confounding effects of tissue scaling.Q48549985
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesedgeRQ113334690
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectgene duplicationQ746284
spider silkQ2740926
P304page(s)8393
P577publication date2017-08-21
P1433published inScientific ReportsQ2261792
P1476titleEvolutionary shifts in gene expression decoupled from gene duplication across functionally distinct spider silk glands
P478volume7

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cites work (P2860)
Q51152990Conservation of a pH-sensitive structure in the C-terminal region of spider silk extends across the entire silk gene family.
Q57454880Major ampullate silk gland transcriptomes and fibre proteomes of the golden orb-weavers, Nephila plumipes and Nephila pilipes (Araneae: Nephilidae)
Q92642804Orb-weaving spider Araneus ventricosus genome elucidates the spidroin gene catalogue
Q92662299Ovarian Transcriptomic Analyses in the Urban Human Health Pest, the Western Black Widow Spider
Q57215529Recent progress and prospects for advancing arachnid genomics
Q98564277Spider phylosymbiosis: divergence of widow spider species and their tissues' microbiomes
Q67242084The transcriptome of Darwin's bark spider silk glands predicts proteins contributing to dragline silk toughness
Q93039038Toward Spider Glue: Long Read Scaffolding for Extreme Length and Repetitious Silk Family Genes AgSp1 and AgSp2 with Insights into Functional Adaptation

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